Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2149982Fold c.111: Activating enzymes of the ubiquitin-like proteins [69571] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 8 strands, order 32145678; strands 6 and 8 are antiparallel to the rest
  4. 2149983Superfamily c.111.1: Activating enzymes of the ubiquitin-like proteins [69572] (3 families) (S)
    transfer adenylyl group to the C-terminal carboxyl group of the ubiquitin and MoaD/ThiS-related proteins
    the ATP nucleotide-binding site is similar to that of the NAD-binding Rossmann-folds
  5. 2150058Family c.111.1.0: automated matches [191511] (1 protein)
    not a true family
  6. 2150059Protein automated matches [190855] (2 species)
    not a true protein

Species:

  1. 2150060Escherichia coli K-12 [TaxId:83333] [188203] (1 PDB entry)
  2. 2150063Escherichia coli [TaxId:562] [188186] (2 PDB entries)
    1. Domains for 1zfn:
      1. 2150064Domain d1zfna_: 1zfn A: [162452]
        automated match to d1jw9b_
        complexed with atp, zn
      2. 2150065Domain d1zfnb_: 1zfn B: [162453]
        automated match to d1jw9b_
        complexed with atp, zn
      3. 2150066Domain d1zfnc_: 1zfn C: [162454]
        automated match to d1jw9b_
        complexed with atp, zn
      4. 2150067Domain d1zfnd_: 1zfn D: [162455]
        automated match to d1jw9b_
        complexed with atp, zn
    2. Domains for 1zkm:
      1. 2150068Domain d1zkma_: 1zkm A: [162496]
        Other proteins in same PDB: d1zkmd2
        automated match to d1jw9b_
        complexed with zn
      2. 2150069Domain d1zkmb_: 1zkm B: [162497]
        Other proteins in same PDB: d1zkmd2
        automated match to d1jw9b_
        complexed with zn
      3. 2150070Domain d1zkmc_: 1zkm C: [162498]
        Other proteins in same PDB: d1zkmd2
        automated match to d1jw9b_
        complexed with zn
      4. 2150071Domain d1zkmd1: 1zkm D:1-244 [162499]
        Other proteins in same PDB: d1zkmd2
        automated match to d1jw9b_
        complexed with zn

More info for Protein automated matches from c.111.1.0: automated matches

Timeline for Protein automated matches from c.111.1.0: automated matches: