Lineage for Protein: automated matches
- Root: SCOPe 2.04
Class b: All beta proteins [48724] (176 folds) 
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) 
Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
Protein automated matches [190854] (9 species)
not a true protein
Species:
Coxsackievirus a24 [TaxId:12089] [260750] (2 PDB entries) - Domain for 4q4x:
Domain d4q4x1_: 4q4x 1: [260751]
automated match to d2plv1_
complexed with ca, cl, hez, na, sia
- Domain for 4q4y:
Domain d4q4y3_: 4q4y 3: [260752]
automated match to d1hxs3_
complexed with ca, cl, hez, mg, myr, sia
- Domain for 4q4x:
Foot-and-mouth disease virus - type a [TaxId:12111] [196861] (3 PDB entries) - Domains for 4gh4:
Domain d4gh4a_: 4gh4 A: [252214]
automated match to d4iv1a_
Domain d4gh4c_: 4gh4 C: [252215]
automated match to d1fmd3_
- Domains for 4iv1:
Domain d4iv1a_: 4iv1 A: [223403]
automated match to d4iv3a_
Domain d4iv1c_: 4iv1 C: [223404]
automated match to d4iv3c_
- Domains for 4iv3:
Domain d4iv3a_: 4iv3 A: [196862]
automated match to d1zba1_
Domain d4iv3c_: 4iv3 C: [196863]
automated match to d1zba3_
- Domains for 4gh4:
Foot-and-mouth disease virus [TaxId:12110] [188180] (2 PDB entries) - Domains for 1zba:
Domain d1zba1_: 1zba 1: [162437]
automated match to d1qqp1_
Domain d1zba3_: 1zba 3: [162438]
automated match to d1bbt3_
- Domains for 1zbe:
Domain d1zbe1_: 1zbe 1: [241128]
automated match to d1fmd1_
Domain d1zbe3_: 1zbe 3: [241129]
automated match to d1fmd3_
- Domains for 1zba:
Foot-and-mouth disease virus [TaxId:12122] [255673] (1 PDB entry) - Domain for 2wzr:
Domain d2wzr3_: 2wzr 3: [244363]
Other proteins in same PDB: d2wzr1_
automated match to d1fmd3_
- Domain for 2wzr:
Human coxsackievirus B3 [TaxId:12072] [194627] (1 PDB entry) - Domain for 4gb3:
Domain d4gb31_: 4gb3 1: [194628]
Other proteins in same PDB: d4gb33_
automated match to d1cov1_
complexed with myr, plm
- Domain for 4gb3:
Human echovirus 7 [TaxId:46018] [255678] (1 PDB entry) - Domains for 2x5i:
Domain d2x5ia_: 2x5i A: [244422]
automated match to d1cov1_
complexed with dao
Domain d2x5ic_: 2x5i C: [244423]
automated match to d1cov3_
complexed with dao
- Domains for 2x5i:
Human enterovirus 71 [TaxId:39054] [195913] (10 PDB entries) - Domain for 3vbf:
Domain d3vbfc_: 3vbf C: [195914]
Other proteins in same PDB: d3vbfa_
automated match to d1bev3_
complexed with amp, cl, k, na, sph
- Domain for 3vbh:
Domain d3vbhc_: 3vbh C: [217748]
Other proteins in same PDB: d3vbha_
automated match to d3vbfc_
complexed with cl, k, na, sph
- Domain for 3zfe:
Domain d3zfec_: 3zfe C: [196803]
Other proteins in same PDB: d3zfea_
automated match to d1bev3_
complexed with cl, na, sph
- Domain for 4cdq:
Domain d4cdqc_: 4cdq C: [236692]
Other proteins in same PDB: d4cdqa_
automated match to d3vbfc_
complexed with 7vr, na
- Domain for 4cdu:
Domain d4cduc_: 4cdu C: [236697]
Other proteins in same PDB: d4cdua_
automated match to d3vbfc_
complexed with cl, na, ym2
- Domain for 4cdw:
Domain d4cdwc_: 4cdw C: [236693]
Other proteins in same PDB: d4cdwa_
automated match to d3vbfc_
complexed with na, vr2
- Domain for 4cdx:
Domain d4cdxc_: 4cdx C: [236696]
Other proteins in same PDB: d4cdxa_
automated match to d3vbfc_
complexed with jf0, na
- Domain for 4cew:
Domain d4cewc_: 4cew C: [236699]
Other proteins in same PDB: d4cewa_
automated match to d3vbfc_
complexed with 7j5
- Domain for 4cey:
Domain d4ceyc_: 4cey C: [236698]
Other proteins in same PDB: d4ceya_
automated match to d3vbfc_
complexed with 906, na
- Domains for 4rqp:
Domain d4rqpb_: 4rqp B: [261955]
Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
automated match to d3vbhc_
Domain d4rqpf_: 4rqp F: [261954]
Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
automated match to d3vbhc_
Domain d4rqpj_: 4rqp J: [261957]
Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
automated match to d3vbhc_
Domain d4rqpn_: 4rqp N: [261961]
Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
automated match to d3vbhc_
Domain d4rqpr_: 4rqp R: [261966]
Other proteins in same PDB: d4rqpc_, d4rqpg_, d4rqpk_, d4rqpo_
automated match to d3vbhc_
- Domain for 3vbf:
Human rhinovirus 14 [TaxId:12131] [258112] (1 PDB entry) - Domains for 4pdw:
Domain d4pdwa_: 4pdw A: [258113]
automated match to d1k5ma_
complexed with 2xk, gol
Domain d4pdwc_: 4pdw C: [258114]
automated match to d1rhi3_
complexed with 2xk, gol
- Domains for 4pdw:
Human rhinovirus 2 [TaxId:12130] [256100] (1 PDB entry) - Domain for 3tn9:
Domain d3tn93_: 3tn9 3: [249961]
automated match to d1aym3_
- Domain for 3tn9:
More info for Protein automated matches from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4)
Timeline for Protein automated matches from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4):
- Protein automated matches from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) first appeared in SCOPe 2.01
- Protein automated matches from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) appears in SCOPe 2.03
- Protein automated matches from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) appears in SCOPe 2.05
- Protein automated matches from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) appears in the current release, SCOPe 2.08