Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097504Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. 2097583Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families) (S)
    in the different families beta-barrels are similarly distorted but may vary in the number of strands
  5. 2097708Family c.6.2.6: PA1517-like [141965] (2 protein domains)
    seven-stranded barrel with a detectable sequence similarity to the six-stranded barrel NodB-like family; member of the same Pfam family (Pfam PF01522)
  6. 2097712Protein automated matches [190850] (3 species)
    not a true protein

Species:

  1. 2097713Burkholderia pseudomallei [TaxId:28450] [189991] (1 PDB entry)
  2. 2097718Pseudomonas aeruginosa, PA01 [TaxId:208964] [188171] (1 PDB entry)
  3. 2097726Pseudomonas fluorescens [TaxId:294] [188464] (3 PDB entries)
    1. Domains for 3cl6:
      1. 2097727Domain d3cl6a_: 3cl6 A: [173303]
        automated match to d1z7aa1
      2. 2097728Domain d3cl6b_: 3cl6 B: [173304]
        automated match to d1z7aa1
    2. Domains for 3cl7:
      1. 2097729Domain d3cl7a_: 3cl7 A: [173305]
        automated match to d1z7aa1
        complexed with hyn
      2. 2097730Domain d3cl7b_: 3cl7 B: [173306]
        automated match to d1z7aa1
        complexed with hyn
    3. Domains for 3cl8:
      1. 2097731Domain d3cl8a_: 3cl8 A: [173307]
        automated match to d1z7aa1
        complexed with 5ac
      2. 2097732Domain d3cl8b_: 3cl8 B: [173308]
        automated match to d1z7aa1
        complexed with 5ac

More info for Protein automated matches from c.6.2.6: PA1517-like

Timeline for Protein automated matches from c.6.2.6: PA1517-like: