SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families)
in the different families beta-barrels are similarly distorted but may vary in the number of strands
Family c.6.2.6: PA1517-like [141965] (2 proteins)
seven-stranded barrel with a detectable sequence similarity to the six-stranded barrel NodB-like family; member of the same Pfam family (Pfam PF01522)
Protein automated matches [190850] (3 species)
not a true protein

Species:

Burkholderia pseudomallei [TaxId:28450] [189991] (1 PDB entry)
- Domains for 3s6o:
  1. Domain d3s6oa_: 3s6o A: [185298]
    automated match to d1z7aa1
    complexed with edo
  2. Domain d3s6ob_: 3s6o B: [185299]
    automated match to d1z7aa1
    complexed with edo
  3. Domain d3s6oc_: 3s6o C: [185300]
    automated match to d1z7aa1
    complexed with edo
  4. Domain d3s6od_: 3s6o D: [185301]
    automated match to d1z7aa1
    complexed with edo
Pseudomonas aeruginosa, PA01 [TaxId:208964] [188171] (1 PDB entry)
- Domains for 1z7a:
  1. Domain d1z7ab_: 1z7a B: [124592]
    Other proteins in same PDB: d1z7aa1
    automated match to d1z7aa1
    complexed with edo, gol, ipa
  2. Domain d1z7ac_: 1z7a C: [124593]
    Other proteins in same PDB: d1z7aa1
    automated match to d1z7aa1
    complexed with edo, gol, ipa
  3. Domain d1z7ad_: 1z7a D: [124594]
    Other proteins in same PDB: d1z7aa1
    automated match to d1z7aa1
    complexed with edo, gol, ipa
  4. Domain d1z7ae_: 1z7a E: [124595]
    Other proteins in same PDB: d1z7aa1
    automated match to d1z7aa1
    complexed with edo, gol, ipa
  5. Domain d1z7af_: 1z7a F: [124596]
    Other proteins in same PDB: d1z7aa1
    automated match to d1z7aa1
    complexed with edo, gol, ipa
  6. Domain d1z7ag_: 1z7a G: [124597]
    Other proteins in same PDB: d1z7aa1
    automated match to d1z7aa1
    complexed with edo, gol, ipa
  7. Domain d1z7ah_: 1z7a H: [124598]
    Other proteins in same PDB: d1z7aa1
    automated match to d1z7aa1
    complexed with edo, gol, ipa
Pseudomonas fluorescens [TaxId:294] [188464] (3 PDB entries)
1. Domains for 3cl6:
  1. Domain d3cl6a_: 3cl6 A: [173303]
    automated match to d1z7aa1
  2. Domain d3cl6b_: 3cl6 B: [173304]
    automated match to d1z7aa1
2. Domains for 3cl7:
  1. Domain d3cl7a_: 3cl7 A: [173305]
    automated match to d1z7aa1
    complexed with hyn
  2. Domain d3cl7b_: 3cl7 B: [173306]
    automated match to d1z7aa1
    complexed with hyn
3. Domains for 3cl8:
  1. Domain d3cl8a_: 3cl8 A: [173307]
    automated match to d1z7aa1
    complexed with 5ac
  2. Domain d3cl8b_: 3cl8 B: [173308]
    automated match to d1z7aa1
    complexed with 5ac

More info for Protein automated matches from c.6.2.6: PA1517-like

Timeline for Protein automated matches from c.6.2.6: PA1517-like:

Protein automated matches from c.6.2.6: PA1517-like first appeared in SCOPe 2.01
Protein automated matches from c.6.2.6: PA1517-like appears in SCOPe 2.07