SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.18: E set domains [81296] (27 families)
"Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
Family b.1.18.21: AMPK-beta glycogen binding domain-like [158886] (4 proteins)
lacks the N-terminal strand (A) and contains a beta-hairpin insertion in the C-terminal strand (G)
Protein automated matches [190844] (1 species)
not a true protein

Species:

Norway rat (Rattus norvegicus) [TaxId:10116] [188163] (3 PDB entries)
1. Domains for 1z0m:
  1. Domain d1z0mb_: 1z0m B: [145953]
    Other proteins in same PDB: d1z0ma1
    automated match to d1z0ma1
  2. Domain d1z0mc_: 1z0m C: [145954]
    Other proteins in same PDB: d1z0ma1
    automated match to d1z0ma1
2. Domains for 1z0n:
  1. Domain d1z0nb_: 1z0n B: [145956]
    Other proteins in same PDB: d1z0na1
    automated match to d1z0na1
  2. Domain d1z0nc_: 1z0n C: [145957]
    Other proteins in same PDB: d1z0na1
    automated match to d1z0na1
3. Domains for 4yef:
  1. Domain d4yefa_: 4yef A: [274368]
    Other proteins in same PDB: d4yefb2, d4yefe2
    automated match to d1z0mb_
    complexed with glu, gol, so4
  2. Domain d4yefb1: 4yef B:76-156 [274367]
    Other proteins in same PDB: d4yefb2, d4yefe2
    automated match to d1z0mb_
    complexed with glu, gol, so4
  3. Domain d4yefc_: 4yef C: [274370]
    Other proteins in same PDB: d4yefb2, d4yefe2
    automated match to d1z0mb_
    complexed with glu, gol, so4
  4. Domain d4yefd_: 4yef D: [274369]
    Other proteins in same PDB: d4yefb2, d4yefe2
    automated match to d1z0mb_
    complexed with glu, gol, so4
  5. Domain d4yefe1: 4yef E:76-156 [274371]
    Other proteins in same PDB: d4yefb2, d4yefe2
    automated match to d1z0mb_
    complexed with glu, gol, so4
  6. Domain d4yeff_: 4yef F: [274372]
    Other proteins in same PDB: d4yefb2, d4yefe2
    automated match to d1z0mb_
    complexed with glu, gol, so4
  7. Domain d4yefg_: 4yef G: [274373]
    Other proteins in same PDB: d4yefb2, d4yefe2
    automated match to d1z0mb_
    complexed with glu, gol, so4

More info for Protein automated matches from b.1.18.21: AMPK-beta glycogen binding domain-like

Timeline for Protein automated matches from b.1.18.21: AMPK-beta glycogen binding domain-like:

Protein automated matches from b.1.18.21: AMPK-beta glycogen binding domain-like first appeared in SCOPe 2.01
Protein automated matches from b.1.18.21: AMPK-beta glycogen binding domain-like appears in SCOPe 2.07