Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2956563Fold d.61: LigT-like [55143] (1 superfamily)
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. 2956564Superfamily d.61.1: LigT-like [55144] (5 families) (S)
  5. 2956578Family d.61.1.3: 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain [103043] (2 proteins)
    automatically mapped to Pfam PF05881
  6. 2956583Protein automated matches [190813] (2 species)
    not a true protein

Species:

  1. 2956584Human (Homo sapiens) [TaxId:9606] [188086] (1 PDB entry)
  2. 2956586Mouse (Mus musculus) [TaxId:10090] [189888] (31 PDB entries)
    1. Domain for 2xmi:
    2. Domain for 2y1p:
    3. Domains for 2y3x:
      1. 2956592Domain d2y3xa_: 2y3x A: [170577]
        automated match to d2ilxa1
        complexed with gol, so4
      2. 2956593Domain d2y3xb_: 2y3x B: [170578]
        automated match to d2ilxa1
        complexed with gol, so4
      3. 2956594Domain d2y3xe_: 2y3x E: [170579]
        automated match to d2ilxa1
        complexed with gol, so4
    4. Domain for 2ydb:
    5. Domain for 2ydc:
    6. Domain for 2ydd:
    7. Domain for 2yoz:
    8. Domain for 2yp0:
    9. Domain for 2ypc:
    10. Domain for 2ype:
    11. Domain for 2yph:
    12. Domain for 2yq9:
    13. Domains for 3zbr:
      1. 2956614Domain d3zbra_: 3zbr A: [218242]
        automated match to d2ydca_
        complexed with nap; mutant
      2. 2956615Domain d3zbrb_: 3zbr B: [218243]
        automated match to d2ydca_
        complexed with nap; mutant
    14. Domain for 3zbs:
    15. Domain for 3zbz:
    16. Domain for 4wbi:
    17. Domain for 4wbl:
    18. Domain for 4wc9:
    19. Domain for 4wca:
    20. Domain for 4wcb:
    21. Domain for 4wcc:
    22. Domain for 4wda:
    23. Domain for 4wdb:
    24. Domain for 4wdd:
    25. Domains for 4wde:
      1. 2956617Domain d4wdea_: 4wde A: [277324]
        automated match to d2xmia_
        complexed with gol; mutant
      2. 2956618Domain d4wdeb_: 4wde B: [277323]
        automated match to d2xmia_
        complexed with gol; mutant
    26. Domain for 4wdf:
    27. Domain for 4wdg:
    28. Domain for 4wdh:
    29. Domain for 4wex:
    30. Domain for 4wfr:
    31. Domain for 5ae0:

More info for Protein automated matches from d.61.1.3: 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain

Timeline for Protein automated matches from d.61.1.3: 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain:

  • Protein automated matches from d.61.1.3: 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain first appeared in SCOPe 2.01
  • Protein automated matches from d.61.1.3: 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain appears in SCOPe 2.07