Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2072411Fold b.85: beta-clip [51268] (7 superfamilies)
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. 2072562Superfamily b.85.4: dUTPase-like [51283] (2 families) (S)
    forms tight trimer through an additional beta-sheet in each subunit
    subunit beta-sheets are orthogonally packed around the three-fold axis
  5. 2072563Family b.85.4.1: dUTPase-like [51284] (5 protein domains)
  6. 2072717Protein automated matches [190798] (8 species)
    not a true protein

Species:

  1. 2072718Burkholderia thailandensis [TaxId:271848] [235375] (1 PDB entry)
  2. 2072720Chlorella variabilis [TaxId:554065] [195003] (1 PDB entry)
  3. 2072722Coxiella burnetii [TaxId:777] [196147] (1 PDB entry)
  4. 2072724Human herpesvirus 4 [TaxId:10377] [231386] (4 PDB entries)
    1. Domains for 2we0:
      1. 2072729Domain d2we0a1: 2we0 A:5-115 [231387]
        automated match to d2bsya1
        complexed with so4, teo, ump; mutant
      2. 2072730Domain d2we0a2: 2we0 A:121-256 [231388]
        automated match to d2bsya2
        complexed with so4, teo, ump; mutant
    2. Domains for 2we1:
      1. 2072727Domain d2we1a1: 2we1 A:4-116 [231389]
        automated match to d2bsya1
        complexed with so4, ump; mutant
      2. 2072728Domain d2we1a2: 2we1 A:121-256 [231390]
        automated match to d2bsya2
        complexed with so4, ump; mutant
    3. Domains for 2we2:
      1. 2072725Domain d2we2a1: 2we2 A:4-115 [231391]
        automated match to d2bsya1
        complexed with so4, ump; mutant
      2. 2072726Domain d2we2a2: 2we2 A:121-256 [231392]
        automated match to d2bsya2
        complexed with so4, ump; mutant
    4. Domains for 2we3:
      1. 2072731Domain d2we3a1: 2we3 A:1-115 [231393]
        automated match to d2bsya1
        complexed with dut, mg, so4; mutant
      2. 2072732Domain d2we3a2: 2we3 A:129-256 [231394]
        automated match to d2bsya2
        complexed with dut, mg, so4; mutant
  5. 2072733Methanocaldococcus jannaschii [TaxId:2190] [226814] (2 PDB entries)
    1. Domain for 2hxe:
    2. Domain for 3gf0:
  6. 2072736Mycobacterium abscessus [TaxId:561007] [226542] (1 PDB entry)
  7. 2072738Mycobacterium tuberculosis [TaxId:1773] [189128] (6 PDB entries)
    1. Domain for 3h6d:
    2. Domain for 3hza:
    3. Domain for 3i93:
    4. Domain for 3loj:
    5. Domain for 4gcy:
    6. Domain for 5edd:
  8. 2072744Plasmodium falciparum [TaxId:36329] [188061] (4 PDB entries)
    1. Domains for 1vyq:
      1. 2072754Domain d1vyqb_: 1vyq B: [120549]
        Other proteins in same PDB: d1vyqa1
        automated match to d1vyqa1
        complexed with dux
      2. 2072755Domain d1vyqc_: 1vyq C: [120550]
        Other proteins in same PDB: d1vyqa1
        automated match to d1vyqa1
        complexed with dux
    2. Domains for 2y8c:
      1. 2072748Domain d2y8ca_: 2y8c A: [195845]
        automated match to d1vyqa1
        complexed with duq, so4
      2. 2072749Domain d2y8cb_: 2y8c B: [195844]
        automated match to d1vyqa1
        complexed with duq, so4
      3. 2072750Domain d2y8cc_: 2y8c C: [198688]
        automated match to d2y8ca_
        complexed with duq, so4
    3. Domains for 3t60:
      1. 2072751Domain d3t60a_: 3t60 A: [216690]
        automated match to d2y8ca_
        complexed with dua, gol
      2. 2072752Domain d3t60b_: 3t60 B: [216691]
        automated match to d2y8ca_
        complexed with dua, gol
      3. 2072753Domain d3t60c_: 3t60 C: [216692]
        automated match to d2y8ca_
        complexed with dua, gol
    4. Domains for 3t64:
      1. 2072745Domain d3t64a_: 3t64 A: [216693]
        automated match to d2y8ca_
        complexed with du3, so4
      2. 2072746Domain d3t64b_: 3t64 B: [216694]
        automated match to d2y8ca_
        complexed with du3, so4
      3. 2072747Domain d3t64c_: 3t64 C: [216695]
        automated match to d2y8ca_
        complexed with du3, so4

More info for Protein automated matches from b.85.4.1: dUTPase-like

Timeline for Protein automated matches from b.85.4.1: dUTPase-like: