Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1912229Fold d.61: LigT-like [55143] (1 superfamily)
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. 1912230Superfamily d.61.1: LigT-like [55144] (5 families) (S)
  5. 1912291Family d.61.1.0: automated matches [191492] (1 protein)
    not a true family
  6. 1912292Protein automated matches [190796] (4 species)
    not a true protein

Species:

  1. 1912293Carassius auratus [TaxId:7957] [255230] (1 PDB entry)
  2. 1912295Escherichia coli [TaxId:83333] [260567] (1 PDB entry)
  3. 1912298Pyrococcus furiosus [TaxId:186497] [255177] (1 PDB entry)
  4. 1912300Pyrococcus horikoshii [TaxId:53953] [188054] (2 PDB entries)
    1. Domain for 1vdx:
    2. Domain for 1vgj:

More info for Protein automated matches from d.61.1.0: automated matches

Timeline for Protein automated matches from d.61.1.0: automated matches: