Species:

1. Bacillus halodurans [TaxId:272558] [225042] (2 PDB entries)

   1. Domains for 1ynp:

      1. Domain d1ynpa_: 1ynp A: [203208] automated match to d4asth_ complexed with gol, na, so4, suc

      2. Domain d1ynpb_: 1ynp B: [203209] automated match to d4asth_ complexed with gol, na, so4, suc

   2. Domains for 1ynq:

      1. Domain d1ynqa_: 1ynq A: [203210] automated match to d4asth_ complexed with gol, na, ndp, so4, suc

      2. Domain d1ynqb_: 1ynq B: [203211] automated match to d4asth_ complexed with gol, na, ndp, so4, suc

2. Bacillus subtilis [TaxId:1423] [196103] (3 PDB entries)

   1. Domains for 3b3d:

      1. Domain d3b3da_: 3b3d A: [208514] automated match to d3guga_ complexed with ca

      2. Domain d3b3db_: 3b3d B: [231826] automated match to d3b3da_ complexed with ca

      3. Domain d3b3dc_: 3b3d C: [208515] automated match to d3guga_ complexed with ca

   2. Domains for 3d3f:

      1. Domain d3d3fa_: 3d3f A: [199223] automated match to d3d3fb_ complexed with ndp

      2. Domain d3d3fb_: 3d3f B: [196581] automated match to d1vbja_ complexed with ndp

   3. Domains for 3f7j:

      1. Domain d3f7ja_: 3f7j A: [199392] automated match to d3f7jb_ complexed with k, no3

      2. Domain d3f7jb_: 3f7j B: [196104] automated match to d1vbja_ complexed with k, no3

3. Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [229247] (2 PDB entries)

   1. Domains for 4ijc:

      1. Domain d4ijca_: 4ijc A: [234866] automated match to d4ijrc_ complexed with gol, so4

      2. Domain d4ijcb_: 4ijc B: [234865] automated match to d4ijrc_ complexed with gol, so4

   2. Domains for 4ijr:

      1. Domain d4ijra_: 4ijr A: [234867] automated match to d4ijrc_ complexed with ndp

      2. Domain d4ijrc_: 4ijr C: [229248] automated match to d2fvla_ complexed with ndp

4. Barley (Hordeum vulgare) [TaxId:4513] [255051] (3 PDB entries)

   1. Domain for 2bgq:

      • Domain d2bgqa_: 2bgq A: [241310] automated match to d3h7ua_ complexed with so4

   2. Domain for 2bgs:

      • Domain d2bgsa_: 2bgs A: [241311] automated match to d3h7ua_ complexed with bct, ndp, so4

   3. Domain for 2vdg:

      • Domain d2vdga_: 2vdg A: [243861] automated match to d3h7ua_ complexed with 1bo, ndp, so4

5. Brucella melitensis [TaxId:359391] [225946] (1 PDB entry)

   • Domains for 3o0k:

     1. Domain d3o0ka_: 3o0k A: [214103] automated match to d1hw6a_ complexed with edo, gol

     2. Domain d3o0kb_: 3o0k B: [214104] automated match to d1hw6a_ complexed with edo, gol

     3. Domain d3o0kc_: 3o0k C: [214105] automated match to d1hw6a_ complexed with edo, gol

     4. Domain d3o0kd_: 3o0k D: [214106] automated match to d1hw6a_ complexed with edo, gol

6. Candida parapsilosis [TaxId:5480] [224874] (3 PDB entries)

   1. Domain for 3vxg:

      • Domain d3vxga_: 3vxg A: [233875] automated match to d3wg6c_

   2. Domains for 3wg6:

      1. Domain d3wg6a_: 3wg6 A: [218237] automated match to d1mzra_ complexed with ndp

      2. Domain d3wg6b_: 3wg6 B: [218238] automated match to d1mzra_ complexed with ndp

      3. Domain d3wg6c_: 3wg6 C: [218239] automated match to d1mzra_ complexed with ndp

      4. Domain d3wg6d_: 3wg6 D: [218240] automated match to d1mzra_ complexed with ndp

   3. Domains for 4h8n:

      1. Domain d4h8na_: 4h8n A: [234631] automated match to d3wg6c_ complexed with ndp

      2. Domain d4h8nb_: 4h8n B: [236010] automated match to d4h8na_ complexed with ndp

7. Escherichia coli K-12 [TaxId:83333] [226398] (2 PDB entries)

   1. Domains for 4ast:

      1. Domain d4asta_: 4ast A: [195388] automated match to d3n6qd_

      2. Domain d4astb_: 4ast B: [195389] automated match to d3n6qd_

      3. Domain d4astc_: 4ast C: [195386] automated match to d3n6qd_

      4. Domain d4astd_: 4ast D: [195393] automated match to d3n6qd_

      5. Domain d4aste_: 4ast E: [195392] automated match to d3n6qd_

      6. Domain d4astf_: 4ast F: [195391] automated match to d3n6qd_

      7. Domain d4astg_: 4ast G: [195390] automated match to d3n6qd_

      8. Domain d4asth_: 4ast H: [195387] automated match to d3n6qd_

   2. Domains for 4aub:

      1. Domain d4auba_: 4aub A: [219152] automated match to d3n6qa_ complexed with flc, nap

      2. Domain d4aubb_: 4aub B: [219153] automated match to d3n6qa_ complexed with flc, nap

      3. Domain d4aubc_: 4aub C: [219154] automated match to d3n6qa_ complexed with flc, nap

      4. Domain d4aubd_: 4aub D: [219155] automated match to d3n6qa_ complexed with flc, nap

      5. Domain d4aube_: 4aub E: [219156] automated match to d3n6qa_ complexed with flc, nap

      6. Domain d4aubf_: 4aub F: [219157] automated match to d3n6qa_ complexed with flc, nap

      7. Domain d4aubg_: 4aub G: [219158] automated match to d3n6qa_ complexed with flc, nap

      8. Domain d4aubh_: 4aub H: [219159] automated match to d3n6qa_ complexed with flc, nap

8. Escherichia coli [TaxId:668369] [189989] (1 PDB entry)

   • Domains for 3n6q:

     1. Domain d3n6qa_: 3n6q A: [181943] automated match to d1exba_ complexed with mg

     2. Domain d3n6qb_: 3n6q B: [181944] automated match to d1exba_ complexed with mg

     3. Domain d3n6qc_: 3n6q C: [181945] automated match to d1exba_ complexed with mg

     4. Domain d3n6qd_: 3n6q D: [181946] automated match to d1exba_ complexed with mg

     5. Domain d3n6qe_: 3n6q E: [181947] automated match to d1exba_ complexed with mg

     6. Domain d3n6qf_: 3n6q F: [181948] automated match to d1exba_ complexed with mg

     7. Domain d3n6qg_: 3n6q G: [181949] automated match to d1exba_ complexed with mg

     8. Domain d3n6qh_: 3n6q H: [181950] automated match to d1exba_ complexed with mg

9. Giardia lamblia [TaxId:184922] [255910] (1 PDB entry)

   • Domains for 3krb:

     1. Domain d3krba_: 3krb A: [247253] automated match to d3guga_ complexed with edo, nap, unx

     2. Domain d3krbb_: 3krb B: [247254] automated match to d3guga_ complexed with edo, nap, unx

10. Gluconobacter oxydans [TaxId:290633] [256462] (2 PDB entries)

    1. Domains for 3wbw:

       1. Domain d3wbwa_: 3wbw A: [256463] automated match to d3f7ja_ complexed with ndp, so4

       2. Domain d3wbwb_: 3wbw B: [262369] automated match to d3f7ja_ complexed with ndp, so4

    2. Domains for 3wbx:

       1. Domain d3wbxa_: 3wbx A: [265591] automated match to d3f7ja_ complexed with so4

       2. Domain d3wbxb_: 3wbx B: [265592] automated match to d3f7ja_ complexed with so4

11. Gluconobacter oxydans [TaxId:442] [189401] (1 PDB entry)

    • Domain for 3n2t:

      • Domain d3n2ta_: 3n2t A: [181852] automated match to d1pz1a_

12. Klebsiella pneumoniae [TaxId:573] [267995] (1 PDB entry)

    • Domain for 4wgh:

      • Domain d4wgha_: 4wgh A: [267577] automated match to d4pmja_ complexed with act, nap

13. Leishmania major [TaxId:347515] [194809] (2 PDB entries)

    1. Domains for 4f40:

       1. Domain d4f40a_: 4f40 A: [221018] automated match to d4g5da_ complexed with cit, cl, edo

       2. Domain d4f40b_: 4f40 B: [221019] automated match to d4g5da_ complexed with cit, cl, edo

    2. Domains for 4g5d:

       1. Domain d4g5da_: 4g5d A: [194810] automated match to d1vbjb_ complexed with ndp

       2. Domain d4g5db_: 4g5d B: [202193] automated match to d4g5da_ complexed with ndp

14. Mycobacterium smegmatis [TaxId:246196] [189236] (2 PDB entries)

    1. Domains for 2wzm:

       1. Domain d2wzma_: 2wzm A: [169727] automated match to d1mzra_ complexed with na7

       2. Domain d2wzmb_: 2wzm B: [169728] automated match to d1mzra_ complexed with na7

    2. Domains for 2wzt:

       1. Domain d2wzta_: 2wzt A: [169735] automated match to d1mzra_

       2. Domain d2wztb_: 2wzt B: [169736] automated match to d1mzra_

15. Mycobacterium tuberculosis [TaxId:1773] [257325] (1 PDB entry)

    • Domain for 4otk:

      • Domain d4otka_: 4otk A: [257326] automated match to d1mzrb_ complexed with cl, mli

16. Rauvolfia serpentina [TaxId:4060] [226312] (3 PDB entries)

    1. Domain for 3v0s:

       • Domain d3v0sa1: 3v0s A:1-305 [217585] automated match to d3eb3a_ complexed with atr

    2. Domain for 3v0t:

       • Domain d3v0ta1: 3v0t A:1-305 [217586] automated match to d3eb3a_ complexed with atr

    3. Domain for 3v0u:

       • Domain d3v0ua1: 3v0u A:0-305 [217587] automated match to d3eb3a_

17. Rhizobium meliloti [TaxId:266834] [257512] (3 PDB entries)

    1. Domain for 4pmj:

       • Domain d4pmja_: 4pmj A: [257513] automated match to d2wzma_ complexed with gol, nap

    2. Domain for 4xap:

       • Domain d4xapa_: 4xap A: [269188] automated match to d4pmja_

    3. Domain for 5c7h:

       • Domain d5c7ha_: 5c7h A: [274728] automated match to d4pmja_ complexed with ndp

18. Salmonella enterica [TaxId:99287] [225546] (1 PDB entry)

    • Domains for 3erp:

      1. Domain d3erpa_: 3erp A: [209618] automated match to d3n6qa_ complexed with cac, cl, edo, na, zn

      2. Domain d3erpb_: 3erp B: [209619] automated match to d3n6qa_ complexed with cac, cl, edo, na, zn

19. Schistosoma japonicum [TaxId:6182] [226697] (1 PDB entry)

    • Domain for 4hbk:

      • Domain d4hbka_: 4hbk A: [222479] automated match to d3ntya_

20. Silkworm (Bombyx mori) [TaxId:7091] [230326] (1 PDB entry)

    • Domain for 3wcz:

      • Domain d3wcza_: 3wcz A: [230327] automated match to d2p5na_ complexed with cit, edo, nap

21. Sinorhizobium meliloti [TaxId:266834] [256124] (1 PDB entry)

    • Domains for 3up8:

      1. Domain d3up8a_: 3up8 A: [250246] automated match to d4fzia_ complexed with act

      2. Domain d3up8b_: 3up8 B: [250247] automated match to d4fzia_ complexed with act

22. Thale cress (Arabidopsis thaliana) [TaxId:3702] [225720] (2 PDB entries)

    1. Domain for 3h7r:

       • Domain d3h7ra_: 3h7r A: [210897] automated match to d2pdia_ complexed with act, edo, nap

    2. Domain for 3h7u:

       • Domain d3h7ua_: 3h7u A: [210898] automated match to d3ln3a_ complexed with act, nap

23. Trypanosoma cruzi [TaxId:353153] [226444] (2 PDB entries)

    1. Domains for 4fzi:

       1. Domain d4fzia_: 4fzi A: [234435] automated match to d4giea_ complexed with glu, so4

       2. Domain d4fzib_: 4fzi B: [234436] automated match to d4giea_ complexed with glu, so4

    2. Domain for 4gie:

       • Domain d4giea_: 4gie A: [221931] automated match to d1xjba_ complexed with act, nap

24. Trypanosome (Trypanosoma brucei) [TaxId:5691] [188050] (1 PDB entry)

    • Domains for 1vbj:

      1. Domain d1vbja_: 1vbj A: [161839] automated match to d1vp5a_ complexed with cit, nap

      2. Domain d1vbjb_: 1vbj B: [161840] automated match to d1vp5a_ complexed with cit, nap

More info for Protein automated matches from c.1.7.0: automated matches

Timeline for Protein automated matches from c.1.7.0: automated matches:

• Protein automated matches from c.1.7.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.1.7.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from c.1.7.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from c.1.7.0: automated matches appears in the current release, SCOPe 2.08