Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2168703Fold d.40: CI-2 family of serine protease inhibitors [54653] (1 superfamily)
    alpha+beta sandwich; loop across free side of beta-sheet
  4. 2168704Superfamily d.40.1: CI-2 family of serine protease inhibitors [54654] (2 families) (S)
  5. 2168705Family d.40.1.1: CI-2 family of serine protease inhibitors [54655] (5 protein domains)
    automatically mapped to Pfam PF00280
  6. 2168758Protein automated matches [190792] (4 species)
    not a true protein

Species:

  1. 2168759Bitter gourd (Momordica charantia) [TaxId:3673] [188049] (1 PDB entry)
  2. 2168761Hordeum vulgare [TaxId:112509] [311115] (1 PDB entry)
  3. 2168763Medicinal leech (Hirudo medicinalis) [TaxId:6421] [193615] (5 PDB entries)
    1. Domains for 4b1t:
      1. 2168769Domain d4b1tb_: 4b1t B: [193616]
        Other proteins in same PDB: d4b1ta_, d4b1tc_
        automated match to d1egla_
        complexed with ca, edo, gol
      2. 2168770Domain d4b1td_: 4b1t D: [201552]
        Other proteins in same PDB: d4b1ta_, d4b1tc_
        automated match to d4b1tb_
        complexed with ca, edo, gol
    2. Domains for 4b2a:
      1. 2168771Domain d4b2ab_: 4b2a B: [194886]
        Other proteins in same PDB: d4b2aa_, d4b2ac_
        automated match to d1egla_
        complexed with ca, edo, gol
      2. 2168772Domain d4b2ad_: 4b2a D: [201558]
        Other proteins in same PDB: d4b2aa_, d4b2ac_
        automated match to d4b2ab_
        complexed with ca, edo, gol
    3. Domains for 4b2b:
      1. 2168764Domain d4b2bb1: 4b2b B:1-70 [194889]
        Other proteins in same PDB: d4b2ba_, d4b2bb2, d4b2bc_, d4b2bd2
        automated match to d1egla_
        complexed with ca, cl, edo, gol
      2. 2168765Domain d4b2bd1: 4b2b D:1-70 [194890]
        Other proteins in same PDB: d4b2ba_, d4b2bb2, d4b2bc_, d4b2bd2
        automated match to d1egla_
        complexed with ca, cl, edo, gol
    4. Domains for 4b2c:
      1. 2168766Domain d4b2cb1: 4b2c B:1-70 [201559]
        Other proteins in same PDB: d4b2ca_, d4b2cb2, d4b2cc_, d4b2cd2
        automated match to d4b2bb_
        complexed with ca, cl, edo, gol
      2. 2168767Domain d4b2cd1: 4b2c D:1-70 [201560]
        Other proteins in same PDB: d4b2ca_, d4b2cb2, d4b2cc_, d4b2cd2
        automated match to d4b2bb_
        complexed with ca, cl, edo, gol
    5. Domain for 4h4f:
  4. 2274129Hordeum vulgare [TaxId:4513] [317430] (2 PDB entries)
    1. Domains for 5fbz:
      1. 2274130Domain d5fbzb_: 5fbz B: [317431]
        Other proteins in same PDB: d5fbza1, d5fbza2, d5fbzc1, d5fbzc2
        automated match to d2ci2i_
        complexed with ca
      2. 2274194Domain d5fbzd1: 5fbz D:21-83 [317495]
        Other proteins in same PDB: d5fbza1, d5fbza2, d5fbzc1, d5fbzc2
        automated match to d2ci2i_
        complexed with ca
    2. Domain for 5ffn:

More info for Protein automated matches from d.40.1.1: CI-2 family of serine protease inhibitors

Timeline for Protein automated matches from d.40.1.1: CI-2 family of serine protease inhibitors: