Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2402886Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2402887Superfamily b.80.1: Pectin lyase-like [51126] (12 families) (S)
    superhelix turns are made of 3 strands each
  5. 2403059Family b.80.1.0: automated matches [191490] (1 protein)
    not a true family
  6. 2403060Protein automated matches [190791] (5 species)
    not a true protein

Species:

  1. 2403061Aspergillus niger [TaxId:5061] [261058] (4 PDB entries)
    1. Domains for 1wmr:
      1. 2403066Domain d1wmra2: 1wmr A:185-564 [264200]
        Other proteins in same PDB: d1wmra1, d1wmra3, d1wmrb1, d1wmrb3
        automated match to d3wwgb2
        complexed with nag, ndg
      2. 2403067Domain d1wmrb2: 1wmr B:185-564 [264202]
        Other proteins in same PDB: d1wmra1, d1wmra3, d1wmrb1, d1wmrb3
        automated match to d3wwgb2
        complexed with nag, ndg
    2. Domains for 1x0c:
      1. 2403064Domain d1x0ca2: 1x0c A:185-564 [264207]
        Other proteins in same PDB: d1x0ca1, d1x0ca3, d1x0cb1, d1x0cb3
        automated match to d3wwgb2
        complexed with nag
      2. 2403065Domain d1x0cb2: 1x0c B:185-564 [264209]
        Other proteins in same PDB: d1x0ca1, d1x0ca3, d1x0cb1, d1x0cb3
        automated match to d3wwgb2
        complexed with nag
    3. Domains for 2z8g:
      1. 2403062Domain d2z8ga2: 2z8g A:185-564 [264632]
        Other proteins in same PDB: d2z8ga1, d2z8ga3, d2z8gb1, d2z8gb3
        automated match to d3wwgb2
        complexed with nag
      2. 2403063Domain d2z8gb2: 2z8g B:185-564 [264634]
        Other proteins in same PDB: d2z8ga1, d2z8ga3, d2z8gb1, d2z8gb3
        automated match to d3wwgb2
        complexed with nag
    4. Domains for 3wwg:
      1. 2403068Domain d3wwga2: 3wwg A:185-564 [262473]
        Other proteins in same PDB: d3wwga1, d3wwga3, d3wwgb1, d3wwgb3, d3wwgc1, d3wwgc3, d3wwgd1, d3wwgd3
        automated match to d3wwgb2
        complexed with mal, nag
      2. 2403069Domain d3wwgb2: 3wwg B:185-564 [261064]
        Other proteins in same PDB: d3wwga1, d3wwga3, d3wwgb1, d3wwgb3, d3wwgc1, d3wwgc3, d3wwgd1, d3wwgd3
        automated match to d1ogox2
        complexed with mal, nag
      3. 2403070Domain d3wwgc2: 3wwg C:185-564 [261059]
        Other proteins in same PDB: d3wwga1, d3wwga3, d3wwgb1, d3wwgb3, d3wwgc1, d3wwgc3, d3wwgd1, d3wwgd3
        automated match to d1ogox2
        complexed with mal, nag
      4. 2403071Domain d3wwgd2: 3wwg D:185-564 [262475]
        Other proteins in same PDB: d3wwga1, d3wwga3, d3wwgb1, d3wwgb3, d3wwgc1, d3wwgc3, d3wwgd1, d3wwgd3
        automated match to d3wwgb2
        complexed with mal, nag
  2. 2403072Aspergillus tubingensis [TaxId:5068] [256219] (1 PDB entry)
  3. 2403074Bacillus sp. [TaxId:132676] [188047] (1 PDB entry)
  4. 2403076Siphovirus 9na [193807] (1 PDB entry)
  5. 2403078Xanthomonas campestris pv. campestris [TaxId:340] [188361] (2 PDB entries)
    1. Domains for 2qx3:
      1. 2403081Domain d2qx3a_: 2qx3 A: [167849]
        automated match to d1aira_
        complexed with po4
      2. 2403082Domain d2qx3b_: 2qx3 B: [167850]
        automated match to d1aira_
        complexed with po4
    2. Domains for 2qxz:
      1. 2403079Domain d2qxza_: 2qxz A: [167876]
        automated match to d1aira_
        complexed with po4
      2. 2403080Domain d2qxzb_: 2qxz B: [167877]
        automated match to d1aira_
        complexed with po4

More info for Protein automated matches from b.80.1.0: automated matches

Timeline for Protein automated matches from b.80.1.0: automated matches: