SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.103: Citrate synthase [48255] (1 superfamily)
multihelical; consists of two all-alpha domains
Superfamily a.103.1: Citrate synthase [48256] (2 families)
Family a.103.1.0: automated matches [191476] (1 protein)
not a true family
Protein automated matches [190763] (12 species)
not a true protein

Species:

Thale cress (Arabidopsis thaliana) [TaxId:3702] [382276] (1 PDB entry)
- Domains for 6k5v:
  1. Domain d6k5va_: 6k5v A: [382278]
    automated match to d1csca_
    complexed with cl
  2. Domain d6k5vb_: 6k5v B: [382277]
    automated match to d1csca_
    complexed with cl
  3. Domain d6k5vc_: 6k5v C: [382347]
    automated match to d1csca_
    complexed with cl
  4. Domain d6k5vd_: 6k5v D: [382361]
    automated match to d1csca_
    complexed with cl
  5. Domain d6k5ve_: 6k5v E: [382300]
    automated match to d1csca_
    complexed with cl
  6. Domain d6k5vf_: 6k5v F: [382308]
    automated match to d1csca_
    complexed with cl
Coxiella burnetii [TaxId:777] [189724] (1 PDB entry)
- Domains for 3tqg:
  1. Domain d3tqga_: 3tqg A: [185910]
    automated match to d1a59a_
  2. Domain d3tqgb_: 3tqg B: [185911]
    automated match to d1a59a_
Francisella tularensis [TaxId:263] [232950] (1 PDB entry)
- Domains for 3msu:
  1. Domain d3msua1: 3msu A:1-424 [232951]
    Other proteins in same PDB: d3msua2, d3msub2
    automated match to d4e6ya_
    complexed with acy, cl, oaa, so4, trs, zn
  2. Domain d3msub1: 3msu B:1-424 [232952]
    Other proteins in same PDB: d3msua2, d3msub2
    automated match to d4e6ya_
    complexed with acy, cl, oaa, so4, trs, zn
Metallosphaera sedula [TaxId:399549] [365747] (2 PDB entries)
1. Domains for 6abx:
  1. Domain d6abxa_: 6abx A: [365748]
    automated match to d1vgpa_
    complexed with flc, gol
  2. Domain d6abxb_: 6abx B: [365772]
    automated match to d1vgpa_
    complexed with flc, gol
2. Domains for 6aby:
  1. Domain d6abya1: 6aby A:1-370 [366362]
    Other proteins in same PDB: d6abya2, d6abyb2
    automated match to d1vgpa_
    complexed with aco, gol, oaa
  2. Domain d6abyb1: 6aby B:1-370 [366396]
    Other proteins in same PDB: d6abya2, d6abyb2
    automated match to d1vgpa_
    complexed with aco, gol, oaa
Mycobacterium bovis [TaxId:233413] [384450] (1 PDB entry)
- Domains for 6wgy:
  1. Domain d6wgya1: 6wgy A:1-373 [384451]
    Other proteins in same PDB: d6wgya2, d6wgyb2
    automated match to d1vgma_
    complexed with cit, iod
  2. Domain d6wgyb1: 6wgy B:1-373 [384486]
    Other proteins in same PDB: d6wgya2, d6wgyb2
    automated match to d1vgma_
    complexed with cit, iod
  3. Domain d6wgyc_: 6wgy C: [384457]
    Other proteins in same PDB: d6wgya2, d6wgyb2
    automated match to d1vgma_
    complexed with cit, iod
  4. Domain d6wgyd_: 6wgy D: [384491]
    Other proteins in same PDB: d6wgya2, d6wgyb2
    automated match to d1vgma_
    complexed with cit, iod
Mycobacterium tuberculosis [TaxId:83332] [268881] (1 PDB entry)
- Domain for 4tvm:
  - Domain d4tvma_: 4tvm A: [268882]
    automated match to d4e6ya_
    complexed with oaa
Neosartorya fumigata [TaxId:451804] [360577] (4 PDB entries)
1. Domains for 6bol:
  1. Domain d6bola_: 6bol A: [360651]
    automated match to d3enja_
    complexed with cl, oaa, po4; mutant
  2. Domain d6bolb_: 6bol B: [360671]
    automated match to d3enja_
    complexed with cl, oaa, po4; mutant
2. Domains for 6bom:
  1. Domain d6boma1: 6bom A:29-465 [360751]
    Other proteins in same PDB: d6boma2
    automated match to d3enja_
    complexed with trs; mutant
  2. Domain d6bomb_: 6bom B: [360703]
    Other proteins in same PDB: d6boma2
    automated match to d3enja_
    complexed with trs; mutant
  3. Domain d6bomc_: 6bom C: [360579]
    Other proteins in same PDB: d6boma2
    automated match to d3enja_
    complexed with trs; mutant
  4. Domain d6bomd_: 6bom D: [360578]
    Other proteins in same PDB: d6boma2
    automated match to d3enja_
    complexed with trs; mutant
  5. Domain d6bome_: 6bom E: [360673]
    Other proteins in same PDB: d6boma2
    automated match to d3enja_
    complexed with trs; mutant
  6. Domain d6bomf_: 6bom F: [360641]
    Other proteins in same PDB: d6boma2
    automated match to d3enja_
    complexed with trs; mutant
3. Domains for 6bon:
  1. Domain d6bona_: 6bon A: [360635]
    automated match to d3enja_
    complexed with coa, oaa
  2. Domain d6bonb_: 6bon B: [360647]
    automated match to d3enja_
    complexed with coa, oaa
4. Domains for 6boo:
  1. Domain d6booa_: 6boo A: [360758]
    automated match to d3enja_
    complexed with coa, oaa
  2. Domain d6boob_: 6boo B: [360754]
    automated match to d3enja_
    complexed with coa, oaa
  3. Domain d6booc_: 6boo C: [360580]
    automated match to d3enja_
    complexed with coa, oaa
  4. Domain d6bood_: 6boo D: [360710]
    automated match to d3enja_
    complexed with coa, oaa
Neosartorya fumigata [TaxId:746128] [347633] (5 PDB entries)
1. Domains for 5uqo:
  1. Domain d5uqoa_: 5uqo A: [347634]
    automated match to d3enja_
  2. Domain d5uqob_: 5uqo B: [347887]
    automated match to d3enja_
2. Domains for 5uqq:
  1. Domain d5uqqa_: 5uqq A: [347821]
    automated match to d3enja_
    complexed with srt
  2. Domain d5uqqb_: 5uqq B: [347733]
    automated match to d3enja_
    complexed with srt
  3. Domain d5uqqc_: 5uqq C: [347683]
    automated match to d3enja_
    complexed with srt
  4. Domain d5uqqd_: 5uqq D: [347779]
    automated match to d3enja_
    complexed with srt
  5. Domain d5uqqe_: 5uqq E: [347649]
    automated match to d3enja_
    complexed with srt
  6. Domain d5uqqf_: 5uqq F: [347713]
    automated match to d3enja_
    complexed with srt
3. Domains for 5uqr:
  1. Domain d5uqra1: 5uqr A:29-465 [347798]
    Other proteins in same PDB: d5uqra2
    automated match to d3enja_
    complexed with 8jd, na, oaa
  2. Domain d5uqrb_: 5uqr B: [347661]
    Other proteins in same PDB: d5uqra2
    automated match to d3enja_
    complexed with 8jd, na, oaa
4. Domains for 5uqu:
  1. Domain d5uqua1: 5uqu A:29-465 [347731]
    Other proteins in same PDB: d5uqua2
    automated match to d3enja_
    complexed with coa, oaa, so4; mutant
  2. Domain d5uqub_: 5uqu B: [347690]
    Other proteins in same PDB: d5uqua2
    automated match to d3enja_
    complexed with coa, oaa, so4; mutant
5. Domains for 6bop:
  1. Domain d6bopa_: 6bop A: [360681]
    automated match to d3enja_
  2. Domain d6bopb_: 6bop B: [360581]
    automated match to d3enja_
  3. Domain d6bopc_: 6bop C: [360678]
    automated match to d3enja_
  4. Domain d6bopd_: 6bop D: [360715]
    automated match to d3enja_
Pseudomonas aeruginosa [TaxId:208964] [391428] (2 PDB entries)
1. Domains for 6s6f:
  1. Domain d6s6fa_: 6s6f A: [391439]
    automated match to d1vgpa_
    complexed with cl, gol
  2. Domain d6s6fb_: 6s6f B: [391429]
    automated match to d1vgpa_
    complexed with cl, gol
2. Domains for 6s87:
  1. Domain d6s87a_: 6s87 A: [391455]
    automated match to d1vgpa_
    complexed with gol, oaa
  2. Domain d6s87b_: 6s87 B: [391449]
    automated match to d1vgpa_
    complexed with gol, oaa
  3. Domain d6s87c_: 6s87 C: [391464]
    automated match to d1vgpa_
    complexed with gol, oaa
  4. Domain d6s87d_: 6s87 D: [391440]
    automated match to d1vgpa_
    complexed with gol, oaa
Salmonella enterica [TaxId:90371] [226106] (1 PDB entry)
- Domains for 3o8j:
  1. Domain d3o8ja_: 3o8j A: [214230]
    automated match to d2ifcc_
    complexed with gol
  2. Domain d3o8jb_: 3o8j B: [214231]
    automated match to d2ifcc_
    complexed with gol
  3. Domain d3o8jc_: 3o8j C: [214232]
    automated match to d2ifcc_
    complexed with gol
  4. Domain d3o8jd_: 3o8j D: [214233]
    automated match to d2ifcc_
    complexed with gol
  5. Domain d3o8je_: 3o8j E: [214234]
    automated match to d2ifcc_
    complexed with gol
  6. Domain d3o8jf_: 3o8j F: [214235]
    automated match to d2ifcc_
    complexed with gol
  7. Domain d3o8jg_: 3o8j G: [214236]
    automated match to d2ifcc_
    complexed with gol
  8. Domain d3o8jh_: 3o8j H: [214237]
    automated match to d2ifcc_
    complexed with gol
  9. Domain d3o8ji_: 3o8j I: [214238]
    automated match to d2ifcc_
    complexed with gol
  10. Domain d3o8jj_: 3o8j J: [214239]
    automated match to d2ifcc_
    complexed with gol
Sulfolobus tokodaii [TaxId:111955] [188057] (1 PDB entry)
- Domain for 1vgp:
  - Domain d1vgpa_: 1vgp A: [161865]
    automated match to d1aj8a_
Thermotoga maritima [TaxId:2336] [187976] (1 PDB entry)
- Domain for 2p2w:
  - Domain d2p2wa_: 2p2w A: [166975]
    automated match to d1aj8a_
    complexed with flc

More info for Protein automated matches from a.103.1.0: automated matches

Timeline for Protein automated matches from a.103.1.0: automated matches:

Protein automated matches from a.103.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from a.103.1.0: automated matches appears in SCOPe 2.07