Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.103: Citrate synthase [48255] (1 superfamily)
    multihelical; consists of two all-alpha domains
  4. Superfamily a.103.1: Citrate synthase [48256] (2 families) (S)
  5. Family a.103.1.0: automated matches [191476] (1 protein)
    not a true family
  6. Protein automated matches [190763] (12 species)
    not a true protein

Species:

  1. Thale cress (Arabidopsis thaliana) [TaxId:3702] [382276] (1 PDB entry)
  2. Coxiella burnetii [TaxId:777] [189724] (1 PDB entry)
  3. Francisella tularensis [TaxId:263] [232950] (1 PDB entry)
  4. Metallosphaera sedula [TaxId:399549] [365747] (2 PDB entries)
    1. Domains for 6abx:
      1. Domain d6abxa_: 6abx A: [365748]
        automated match to d1vgpa_
        complexed with flc, gol
      2. Domain d6abxb_: 6abx B: [365772]
        automated match to d1vgpa_
        complexed with flc, gol
    2. Domains for 6aby:
      1. Domain d6abya1: 6aby A:1-370 [366362]
        Other proteins in same PDB: d6abya2, d6abyb2
        automated match to d1vgpa_
        complexed with aco, gol, oaa
      2. Domain d6abyb1: 6aby B:1-370 [366396]
        Other proteins in same PDB: d6abya2, d6abyb2
        automated match to d1vgpa_
        complexed with aco, gol, oaa
  5. Mycobacterium bovis [TaxId:233413] [384450] (1 PDB entry)
  6. Mycobacterium tuberculosis [TaxId:83332] [268881] (1 PDB entry)
  7. Neosartorya fumigata [TaxId:451804] [360577] (4 PDB entries)
    1. Domains for 6bol:
      1. Domain d6bola_: 6bol A: [360651]
        automated match to d3enja_
        complexed with cl, oaa, po4; mutant
      2. Domain d6bolb_: 6bol B: [360671]
        automated match to d3enja_
        complexed with cl, oaa, po4; mutant
    2. Domains for 6bom:
      1. Domain d6boma1: 6bom A:29-465 [360751]
        Other proteins in same PDB: d6boma2
        automated match to d3enja_
        complexed with trs; mutant
      2. Domain d6bomb_: 6bom B: [360703]
        Other proteins in same PDB: d6boma2
        automated match to d3enja_
        complexed with trs; mutant
      3. Domain d6bomc_: 6bom C: [360579]
        Other proteins in same PDB: d6boma2
        automated match to d3enja_
        complexed with trs; mutant
      4. Domain d6bomd_: 6bom D: [360578]
        Other proteins in same PDB: d6boma2
        automated match to d3enja_
        complexed with trs; mutant
      5. Domain d6bome_: 6bom E: [360673]
        Other proteins in same PDB: d6boma2
        automated match to d3enja_
        complexed with trs; mutant
      6. Domain d6bomf_: 6bom F: [360641]
        Other proteins in same PDB: d6boma2
        automated match to d3enja_
        complexed with trs; mutant
    3. Domains for 6bon:
      1. Domain d6bona_: 6bon A: [360635]
        automated match to d3enja_
        complexed with coa, oaa
      2. Domain d6bonb_: 6bon B: [360647]
        automated match to d3enja_
        complexed with coa, oaa
    4. Domains for 6boo:
      1. Domain d6booa_: 6boo A: [360758]
        automated match to d3enja_
        complexed with coa, oaa
      2. Domain d6boob_: 6boo B: [360754]
        automated match to d3enja_
        complexed with coa, oaa
      3. Domain d6booc_: 6boo C: [360580]
        automated match to d3enja_
        complexed with coa, oaa
      4. Domain d6bood_: 6boo D: [360710]
        automated match to d3enja_
        complexed with coa, oaa
  8. Neosartorya fumigata [TaxId:746128] [347633] (5 PDB entries)
    1. Domains for 5uqo:
      1. Domain d5uqoa_: 5uqo A: [347634]
        automated match to d3enja_
      2. Domain d5uqob_: 5uqo B: [347887]
        automated match to d3enja_
    2. Domains for 5uqq:
      1. Domain d5uqqa_: 5uqq A: [347821]
        automated match to d3enja_
        complexed with srt
      2. Domain d5uqqb_: 5uqq B: [347733]
        automated match to d3enja_
        complexed with srt
      3. Domain d5uqqc_: 5uqq C: [347683]
        automated match to d3enja_
        complexed with srt
      4. Domain d5uqqd_: 5uqq D: [347779]
        automated match to d3enja_
        complexed with srt
      5. Domain d5uqqe_: 5uqq E: [347649]
        automated match to d3enja_
        complexed with srt
      6. Domain d5uqqf_: 5uqq F: [347713]
        automated match to d3enja_
        complexed with srt
    3. Domains for 5uqr:
      1. Domain d5uqra1: 5uqr A:29-465 [347798]
        Other proteins in same PDB: d5uqra2
        automated match to d3enja_
        complexed with 8jd, na, oaa
      2. Domain d5uqrb_: 5uqr B: [347661]
        Other proteins in same PDB: d5uqra2
        automated match to d3enja_
        complexed with 8jd, na, oaa
    4. Domains for 5uqu:
      1. Domain d5uqua1: 5uqu A:29-465 [347731]
        Other proteins in same PDB: d5uqua2
        automated match to d3enja_
        complexed with coa, oaa, so4; mutant
      2. Domain d5uqub_: 5uqu B: [347690]
        Other proteins in same PDB: d5uqua2
        automated match to d3enja_
        complexed with coa, oaa, so4; mutant
    5. Domains for 6bop:
      1. Domain d6bopa_: 6bop A: [360681]
        automated match to d3enja_
      2. Domain d6bopb_: 6bop B: [360581]
        automated match to d3enja_
      3. Domain d6bopc_: 6bop C: [360678]
        automated match to d3enja_
      4. Domain d6bopd_: 6bop D: [360715]
        automated match to d3enja_
  9. Pseudomonas aeruginosa [TaxId:208964] [391428] (2 PDB entries)
    1. Domains for 6s6f:
      1. Domain d6s6fa_: 6s6f A: [391439]
        automated match to d1vgpa_
        complexed with cl, gol
      2. Domain d6s6fb_: 6s6f B: [391429]
        automated match to d1vgpa_
        complexed with cl, gol
    2. Domains for 6s87:
      1. Domain d6s87a_: 6s87 A: [391455]
        automated match to d1vgpa_
        complexed with gol, oaa
      2. Domain d6s87b_: 6s87 B: [391449]
        automated match to d1vgpa_
        complexed with gol, oaa
      3. Domain d6s87c_: 6s87 C: [391464]
        automated match to d1vgpa_
        complexed with gol, oaa
      4. Domain d6s87d_: 6s87 D: [391440]
        automated match to d1vgpa_
        complexed with gol, oaa
  10. Salmonella enterica [TaxId:90371] [226106] (1 PDB entry)
  11. Sulfolobus tokodaii [TaxId:111955] [188057] (1 PDB entry)
  12. Thermotoga maritima [TaxId:2336] [187976] (1 PDB entry)

More info for Protein automated matches from a.103.1.0: automated matches

Timeline for Protein automated matches from a.103.1.0: automated matches: