Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410018Superfamily b.121.3: Nucleoplasmin-like core domain [69203] (2 families) (S)
    oligomerizes into a pentameric ring structure
  5. 2410019Family b.121.3.1: Nucleoplasmin-like core domain [69204] (4 proteins)
    automatically mapped to Pfam PF03066
  6. 2410056Protein automated matches [190762] (3 species)
    not a true protein

Species:

  1. 2410057African clawed frog (Xenopus laevis) [TaxId:8355] [188719] (1 PDB entry)
  2. 2410068Human (Homo sapiens) [TaxId:9606] [187973] (2 PDB entries)
    1. Domains for 2p1b:
      1. 2410069Domain d2p1ba_: 2p1b A: [166935]
        automated match to d1xb9a_
      2. 2410070Domain d2p1bb_: 2p1b B: [166936]
        automated match to d1xb9a_
      3. 2410071Domain d2p1bc_: 2p1b C: [166937]
        automated match to d1xb9a_
      4. 2410072Domain d2p1bd_: 2p1b D: [166938]
        automated match to d1xb9a_
      5. 2410073Domain d2p1be_: 2p1b E: [166939]
        automated match to d1xb9a_
      6. 2410074Domain d2p1bf_: 2p1b F: [166940]
        automated match to d1xb9a_
      7. 2410075Domain d2p1bg_: 2p1b G: [166941]
        automated match to d1xb9a_
      8. 2410076Domain d2p1bh_: 2p1b H: [166942]
        automated match to d1xb9a_
      9. 2410077Domain d2p1bi_: 2p1b I: [166943]
        automated match to d1xb9a_
      10. 2410078Domain d2p1bj_: 2p1b J: [166944]
        automated match to d1xb9a_
    2. Domains for 5ehd:
      1. 2410079Domain d5ehda_: 5ehd A: [325332]
        automated match to d4n8ma_
        complexed with cl
      2. 2410080Domain d5ehdb_: 5ehd B: [324850]
        automated match to d4n8ma_
        complexed with cl
      3. 2410081Domain d5ehdc_: 5ehd C: [325040]
        automated match to d4n8ma_
        complexed with cl
      4. 2410082Domain d5ehdd_: 5ehd D: [325003]
        automated match to d4n8ma_
        complexed with cl
      5. 2410083Domain d5ehde_: 5ehd E: [324956]
        automated match to d4n8ma_
        complexed with cl
      6. 2410084Domain d5ehdf_: 5ehd F: [325331]
        automated match to d4n8ma_
        complexed with cl
      7. 2410085Domain d5ehdg_: 5ehd G: [324862]
        automated match to d4n8ma_
        complexed with cl
      8. 2410086Domain d5ehdh_: 5ehd H: [325340]
        automated match to d4n8ma_
        complexed with cl
      9. 2410087Domain d5ehdi_: 5ehd I: [325050]
        automated match to d4n8ma_
        complexed with cl
      10. 2410088Domain d5ehdj_: 5ehd J: [325336]
        automated match to d4n8ma_
        complexed with cl
  3. 2410089Mouse (Mus musculus) [TaxId:10090] [237668] (1 PDB entry)

More info for Protein automated matches from b.121.3.1: Nucleoplasmin-like core domain

Timeline for Protein automated matches from b.121.3.1: Nucleoplasmin-like core domain: