SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.2: Transferrin [53888] (4 proteins)
further duplication: composed of two two-domain lobes
Protein automated matches [190754] (1 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [187949] (3 PDB entries)
1. Domains for 2o7u:
  1. Domain d2o7ua_: 2o7u A: [166571]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  2. Domain d2o7ub_: 2o7u B: [166572]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  3. Domain d2o7uc_: 2o7u C: [166573]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  4. Domain d2o7ud_: 2o7u D: [166574]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  5. Domain d2o7ue_: 2o7u E: [166575]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  6. Domain d2o7uf_: 2o7u F: [166576]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  7. Domain d2o7ug_: 2o7u G: [166577]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  8. Domain d2o7uh_: 2o7u H: [166578]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
  9. Domain d2o7ui_: 2o7u I: [166579]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
2. Domain for 3fgs:
  - Domain d3fgsa_: 3fgs A: [175775]
    automated match to d1bp5c_
    complexed with co3, fe; mutant
3. Domain for 3skp:
  - Domain d3skpa_: 3skp A: [196028]
    automated match to d2haua1
    complexed with so4

More info for Protein automated matches from c.94.1.2: Transferrin

Timeline for Protein automated matches from c.94.1.2: Transferrin:

Protein automated matches from c.94.1.2: Transferrin first appeared in SCOPe 2.01
Protein automated matches from c.94.1.2: Transferrin appears in SCOPe 2.06
Protein automated matches from c.94.1.2: Transferrin appears in the current release, SCOPe 2.08