SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.34: SH3-like barrel [50036] (21 superfamilies)
barrel, partly opened; n*=4, S*=8; meander
the last strand is interrupted by a turn of 3-10 helix
Superfamily b.34.9: Tudor/PWWP/MBT [63748] (5 families)
Family b.34.9.1: Tudor domain [63749] (9 proteins)
Pfam PF00567
Protein automated matches [190752] (1 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [187947] (8 PDB entries)
1. Domain for 2o4x:
  - Domain d2o4xb_: 2o4x B: [166549]
    automated match to d2hqxa1
2. Domain for 4a4e:
  - Domain d4a4ea_: 4a4e A: [250920]
    automated match to d1mhna_
    protein/RNA complex; complexed with 2mr
3. Domain for 4a4g:
  - Domain d4a4ga_: 4a4g A: [250922]
    automated match to d1mhna_
    protein/RNA complex; complexed with da2
4. Domain for 4qq6:
  - Domain d4qq6a_: 4qq6 A: [258805]
    automated match to d4a4ga_
    protein/RNA complex; complexed with 36x, unx
5. Domains for 5d6w:
  1. Domain d5d6wa1: 5d6w A:897-955 [310378]
    automated match to d2gfaa2
    complexed with srt
  2. Domain d5d6wa2: 5d6w A:956-1011 [310379]
    automated match to d2qqra2
    complexed with srt
  3. Domain d5d6wb1: 5d6w B:897-955 [310380]
    automated match to d2gfaa2
    complexed with srt
  4. Domain d5d6wb2: 5d6w B:956-1011 [310381]
    automated match to d2qqra2
    complexed with srt
  5. Domain d5d6wc1: 5d6w C:897-955 [310382]
    automated match to d2gfaa2
    complexed with srt
  6. Domain d5d6wc2: 5d6w C:956-1011 [310383]
    automated match to d2qqra2
    complexed with srt
  7. Domain d5d6wd1: 5d6w D:897-955 [310384]
    automated match to d2gfaa2
    complexed with srt
  8. Domain d5d6wd2: 5d6w D:956-1011 [310385]
    automated match to d2qqra2
    complexed with srt
6. Domains for 5d6x:
  1. Domain d5d6xa1: 5d6x A:897-955 [310386]
    automated match to d2gfaa2
    complexed with so4
  2. Domain d5d6xa2: 5d6x A:956-1011 [310387]
    automated match to d2qqra2
    complexed with so4
  3. Domain d5d6xb1: 5d6x B:897-955 [310388]
    automated match to d2gfaa2
    complexed with so4
  4. Domain d5d6xb2: 5d6x B:956-1011 [310389]
    automated match to d2qqra2
    complexed with so4
7. Domains for 5var:
  1. Domain d5vara1: 5var A:897-955 [348237]
    automated match to d2qqra1
    complexed with 92y
  2. Domain d5vara2: 5var A:956-1004 [348238]
    automated match to d2qqra2
    complexed with 92y
8. Domains for 7d4a:
  1. Domain d7d4aa1: 7d4a A:898-955 [390091]
    Other proteins in same PDB: d7d4aa3
    automated match to d2qqra1
    complexed with so4
  2. Domain d7d4aa2: 7d4a A:956-1011 [390092]
    Other proteins in same PDB: d7d4aa3
    automated match to d2qqra2
    complexed with so4

More info for Protein automated matches from b.34.9.1: Tudor domain

Timeline for Protein automated matches from b.34.9.1: Tudor domain:

Protein automated matches from b.34.9.1: Tudor domain first appeared in SCOPe 2.01
Protein automated matches from b.34.9.1: Tudor domain appears in SCOPe 2.07