Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2042196Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2042197Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2043924Family b.29.1.14: vp4 sialic acid binding domain [74907] (2 protein domains)
    automatically mapped to Pfam PF00426
  6. 2043933Protein automated matches [190699] (3 species)
    not a true protein

Species:

  1. 2043934Porcine rotavirus [TaxId:31578] [189719] (3 PDB entries)
    1. Domains for 3sis:
      1. 2043939Domain d3sisa1: 3sis A:64-224 [185416]
        Other proteins in same PDB: d3sisa2
        automated match to d1kqra_
        complexed with mn0, mpd, na
      2. 2043940Domain d3sisb_: 3sis B: [185417]
        Other proteins in same PDB: d3sisa2
        automated match to d1kqra_
        complexed with mn0, mpd, na
    2. Domains for 3sit:
      1. 2043935Domain d3sita1: 3sit A:64-224 [185418]
        Other proteins in same PDB: d3sita2
        automated match to d1kqra_
        complexed with mrd, na
      2. 2043936Domain d3sitb_: 3sit B: [185419]
        Other proteins in same PDB: d3sita2
        automated match to d1kqra_
        complexed with mrd, na
    3. Domains for 3tay:
      1. 2043937Domain d3taya1: 3tay A:64-224 [192512]
        Other proteins in same PDB: d3taya2, d3tayb2
        automated match to d2i2sa_
        complexed with ben, epe, mn0, mpd, na, so4
      2. 2043938Domain d3tayb1: 3tay B:64-224 [192819]
        Other proteins in same PDB: d3taya2, d3tayb2
        automated match to d2i2sa_
        complexed with ben, epe, mn0, mpd, na, so4
  2. 2043941Rotavirus c [TaxId:10913] [187837] (1 PDB entry)
  3. 2274789Porcine rotavirus (serotype 5 / strain tfr-41) [TaxId:31581] [318090] (1 PDB entry)

More info for Protein automated matches from b.29.1.14: vp4 sialic acid binding domain

Timeline for Protein automated matches from b.29.1.14: vp4 sialic acid binding domain: