Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2031889Superfamily b.1.13: Superoxide reductase-like [49367] (2 families) (S)
  5. 2031890Family b.1.13.1: Superoxide reductase-like [49368] (3 protein domains)
    binds iron in the site that is topologically equivalent to the copper-binding site of cupredoxins
    automatically mapped to Pfam PF01880
  6. 2031913Protein automated matches [190694] (3 species)
    not a true protein

Species:

  1. 2031914Archaeoglobus fulgidus [TaxId:2234] [237934] (4 PDB entries)
    1. Domains for 4bfj:
      1. 2031921Domain d4bfja_: 4bfj A: [240013]
        automated match to d4bfjb_
        complexed with fe; mutant
      2. 2031922Domain d4bfjb_: 4bfj B: [237935]
        automated match to d1dqia_
        complexed with fe; mutant
    2. Domains for 4bfk:
      1. 2031915Domain d4bfka_: 4bfk A: [237936]
        automated match to d1dqia_
        complexed with fe; mutant
      2. 2031916Domain d4bfkb_: 4bfk B: [237937]
        automated match to d1dqia_
        complexed with fe; mutant
      3. 2031917Domain d4bfkc_: 4bfk C: [237938]
        automated match to d1dqia_
        complexed with fe; mutant
      4. 2031918Domain d4bfkd_: 4bfk D: [237939]
        automated match to d1dqia_
        complexed with fe; mutant
    3. Domains for 4c4b:
      1. 2031919Domain d4c4ba_: 4c4b A: [257731]
        automated match to d4bfkb_
        complexed with edo, fe2
      2. 2031920Domain d4c4bb_: 4c4b B: [257732]
        automated match to d4bfkb_
        complexed with edo, fe2
    4. Domains for 4c4u:
      1. 2031923Domain d4c4ua_: 4c4u A: [258633]
        automated match to d4bfkb_
        complexed with fe2; mutant
      2. 2031924Domain d4c4ub_: 4c4u B: [258640]
        automated match to d4bfkb_
        complexed with fe2; mutant
      3. 2031925Domain d4c4uc_: 4c4u C: [258637]
        automated match to d4bfkb_
        complexed with fe2; mutant
      4. 2031926Domain d4c4ud_: 4c4u D: [258636]
        automated match to d4bfkb_
        complexed with fe2; mutant
      5. 2031927Domain d4c4ue_: 4c4u E: [258634]
        automated match to d4bfkb_
        complexed with fe2; mutant
      6. 2031928Domain d4c4uf_: 4c4u F: [258631]
        automated match to d4bfkb_
        complexed with fe2; mutant
      7. 2031929Domain d4c4ug_: 4c4u G: [258638]
        automated match to d4bfkb_
        complexed with fe2; mutant
      8. 2031930Domain d4c4uh_: 4c4u H: [258632]
        automated match to d4bfkb_
        complexed with fe2; mutant
      9. 2031931Domain d4c4ui_: 4c4u I: [258639]
        automated match to d4bfkb_
        complexed with fe2; mutant
      10. 2031932Domain d4c4uj_: 4c4u J: [258635]
        automated match to d4bfkb_
        complexed with fe2; mutant
      11. 2031933Domain d4c4uk_: 4c4u K: [258641]
        automated match to d4bfkb_
        complexed with fe2; mutant
      12. 2031934Domain d4c4ul_: 4c4u L: [258644]
        automated match to d4bfkb_
        complexed with fe2; mutant
      13. 2031935Domain d4c4um_: 4c4u M: [258646]
        automated match to d4bfkb_
        complexed with fe2; mutant
      14. 2031936Domain d4c4un_: 4c4u N: [258643]
        automated match to d4bfkb_
        complexed with fe2; mutant
      15. 2031937Domain d4c4uo_: 4c4u O: [258642]
        automated match to d4bfkb_
        complexed with fe2; mutant
      16. 2031938Domain d4c4up_: 4c4u P: [258645]
        automated match to d4bfkb_
        complexed with fe2; mutant
  2. 2031939Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId:887] [255263] (3 PDB entries)
    1. Domains for 2ji1:
      1. 2031944Domain d2ji1a1: 2ji1 A:38-126 [138331]
        Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
        automated match to d1vzga1
        complexed with ca, fe, fe2
      2. 2031945Domain d2ji1b1: 2ji1 B:38-126 [138333]
        Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
        automated match to d1vzga1
        complexed with ca, fe, fe2
      3. 2031946Domain d2ji1c1: 2ji1 C:38-126 [138335]
        Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
        automated match to d1vzga1
        complexed with ca, fe, fe2
      4. 2031947Domain d2ji1d1: 2ji1 D:38-126 [138337]
        Other proteins in same PDB: d2ji1a2, d2ji1b2, d2ji1c2, d2ji1d2
        automated match to d1vzga1
        complexed with ca, fe, fe2
    2. Domains for 2ji2:
      1. 2031940Domain d2ji2a1: 2ji2 A:38-126 [138339]
        Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
        automated match to d1vzga1
        complexed with ca, fe, fe2, no3; mutant
      2. 2031941Domain d2ji2b1: 2ji2 B:38-126 [138341]
        Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
        automated match to d1vzga1
        complexed with ca, fe, fe2, no3; mutant
      3. 2031942Domain d2ji2c1: 2ji2 C:38-126 [138343]
        Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
        automated match to d1vzga1
        complexed with ca, fe, fe2, no3; mutant
      4. 2031943Domain d2ji2d1: 2ji2 D:38-126 [138345]
        Other proteins in same PDB: d2ji2a2, d2ji2b2, d2ji2c2, d2ji2d2
        automated match to d1vzga1
        complexed with ca, fe, fe2, no3; mutant
    3. Domains for 2ji3:
      1. 2031948Domain d2ji3a1: 2ji3 A:38-126 [138347]
        Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
        automated match to d1vzga1
        complexed with ca, fe, no3, per; mutant
      2. 2031949Domain d2ji3b1: 2ji3 B:38-126 [138349]
        Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
        automated match to d1vzga1
        complexed with ca, fe, no3, per; mutant
      3. 2031950Domain d2ji3c1: 2ji3 C:38-126 [138351]
        Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
        automated match to d1vzga1
        complexed with ca, fe, no3, per; mutant
      4. 2031951Domain d2ji3d1: 2ji3 D:38-126 [138353]
        Other proteins in same PDB: d2ji3a2, d2ji3b2, d2ji3c2, d2ji3d2
        automated match to d1vzga1
        complexed with ca, fe, no3, per; mutant
  3. 2031952Pyrococcus horikoshii OT3 [TaxId:70601] [187828] (1 PDB entry)

More info for Protein automated matches from b.1.13.1: Superoxide reductase-like

Timeline for Protein automated matches from b.1.13.1: Superoxide reductase-like: