SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.31: ThiG-like [110399] (2 families)
shares the common phosphate-binding site with other superfamilies
Family c.1.31.0: automated matches [191453] (1 protein)
not a true family
Protein automated matches [190693] (3 species)
not a true protein

Species:

Amycolatopsis orientalis [TaxId:797057] [257127] (2 PDB entries)
1. Domain for 4n6e:
  - Domain d4n6ea_: 4n6e A: [257128]
    automated match to d1tyga_
    complexed with so4
2. Domains for 4n6f:
  1. Domain d4n6fa_: 4n6f A: [257129]
    automated match to d1tyga_
    complexed with ca, f6r
  2. Domain d4n6fb_: 4n6f B: [257971]
    automated match to d1tyga_
    complexed with ca, f6r
Mycobacterium tuberculosis [TaxId:83332] [351030] (1 PDB entry)
- Domains for 5z9y:
  1. Domain d5z9ya_: 5z9y A: [351031]
    automated match to d1xm3c_
    complexed with dxp
  2. Domain d5z9yb_: 5z9y B: [351032]
    automated match to d1xm3c_
    complexed with dxp
Thermus thermophilus [TaxId:274] [187825] (1 PDB entry)
- Domains for 2htm:
  1. Domain d2htma_: 2htm A: [161453]
    Other proteins in same PDB: d2htme_, d2htmf_, d2htmg_, d2htmh_
    automated match to d1xm3a_
  2. Domain d2htmb_: 2htm B: [161454]
    Other proteins in same PDB: d2htme_, d2htmf_, d2htmg_, d2htmh_
    automated match to d1xm3a_
  3. Domain d2htmc_: 2htm C: [161455]
    Other proteins in same PDB: d2htme_, d2htmf_, d2htmg_, d2htmh_
    automated match to d1xm3a_
  4. Domain d2htmd_: 2htm D: [161456]
    Other proteins in same PDB: d2htme_, d2htmf_, d2htmg_, d2htmh_
    automated match to d1xm3a_

More info for Protein automated matches from c.1.31.0: automated matches

Timeline for Protein automated matches from c.1.31.0: automated matches:

Protein automated matches from c.1.31.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from c.1.31.0: automated matches appears in SCOPe 2.07