Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1802176Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 1802177Superfamily b.68.1: Sialidases [50939] (3 families) (S)
  5. 1802584Family b.68.1.0: automated matches [191452] (1 protein)
    not a true family
  6. 1802585Protein automated matches [190692] (11 species)
    not a true protein

Species:

  1. 1802586Enterobacteria phage [TaxId:948870] [236008] (1 PDB entry)
  2. 1802590Influenza a virus (a/california/07/2009(h1n1)) [TaxId:641809] [193484] (2 PDB entries)
    1. Domains for 4b7q:
      1. 1802595Domain d4b7qa_: 4b7q A: [251180]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
      2. 1802596Domain d4b7qb_: 4b7q B: [251181]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
      3. 1802597Domain d4b7qc_: 4b7q C: [251182]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
      4. 1802598Domain d4b7qd_: 4b7q D: [251183]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
    2. Domains for 4b7r:
      1. 1802591Domain d4b7ra_: 4b7r A: [201578]
        automated match to d4b7rb_
        complexed with ca, epe, g39, nag; mutant
      2. 1802592Domain d4b7rb_: 4b7r B: [193485]
        automated match to d3ti4a_
        complexed with ca, epe, g39, nag; mutant
      3. 1802593Domain d4b7rc_: 4b7r C: [201579]
        automated match to d4b7rb_
        complexed with ca, epe, g39, nag; mutant
      4. 1802594Domain d4b7rd_: 4b7r D: [201580]
        automated match to d4b7rb_
        complexed with ca, epe, g39, nag; mutant
  3. 1802599Influenza a virus (a/duck/ukraine/1/1963(h3n8)) [TaxId:385580] [189572] (2 PDB entries)
    1. Domain for 3o9j:
    2. Domain for 3o9k:
  4. 1802602Influenza a virus (a/mallard duck/alb/60/1976(h12n5)) [TaxId:352705] [258463] (1 PDB entry)
  5. 1802605Influenza a virus (a/netherlands/2631/2010(h1n1)) [TaxId:1027873] [256197] (2 PDB entries)
    1. Domains for 4b7m:
      1. 1802606Domain d4b7ma_: 4b7m A: [251177]
        automated match to d4b7ra_
        complexed with ca, nag, po4; mutant
      2. 1802607Domain d4b7mb_: 4b7m B: [251178]
        automated match to d4b7ra_
        complexed with ca, nag, po4; mutant
    2. Domain for 4b7n:
  6. 1802609Influenza A virus [TaxId:11320] [188445] (31 PDB entries)
    1. Domain for 2ht5:
    2. Domain for 2ht7:
    3. Domain for 2ht8:
    4. Domain for 2htq:
    5. Domain for 2htr:
    6. Domain for 2htu:
    7. Domains for 2htv:
      1. 1802693Domain d2htva_: 2htv A: [165249]
        automated match to d2bata_
        complexed with ca, nag
      2. 1802694Domain d2htvb_: 2htv B: [165250]
        automated match to d2bata_
        complexed with ca, nag
    8. Domains for 2hty:
      1. 1802642Domain d2htya_: 2hty A: [165251]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      2. 1802643Domain d2htyb_: 2hty B: [165252]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      3. 1802644Domain d2htyc_: 2hty C: [165253]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      4. 1802645Domain d2htyd_: 2hty D: [165254]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      5. 1802646Domain d2htye_: 2hty E: [165255]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      6. 1802647Domain d2htyf_: 2hty F: [165256]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      7. 1802648Domain d2htyg_: 2hty G: [165257]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      8. 1802649Domain d2htyh_: 2hty H: [165258]
        automated match to d1a14n_
        complexed with ca, nag, ndg
    9. Domains for 2hu0:
      1. 1802685Domain d2hu0a_: 2hu0 A: [165259]
        automated match to d1a14n_
        complexed with g39
      2. 1802686Domain d2hu0b_: 2hu0 B: [165260]
        automated match to d1a14n_
        complexed with g39
      3. 1802687Domain d2hu0c_: 2hu0 C: [165261]
        automated match to d1a14n_
        complexed with g39
      4. 1802688Domain d2hu0d_: 2hu0 D: [165262]
        automated match to d1a14n_
        complexed with g39
      5. 1802689Domain d2hu0e_: 2hu0 E: [165263]
        automated match to d1a14n_
        complexed with g39
      6. 1802690Domain d2hu0f_: 2hu0 F: [165264]
        automated match to d1a14n_
        complexed with g39
      7. 1802691Domain d2hu0g_: 2hu0 G: [165265]
        automated match to d1a14n_
        complexed with g39
      8. 1802692Domain d2hu0h_: 2hu0 H: [165266]
        automated match to d1a14n_
        complexed with g39
    10. Domains for 2hu4:
      1. 1802662Domain d2hu4a_: 2hu4 A: [165267]
        automated match to d1a14n_
        complexed with g39
      2. 1802663Domain d2hu4b_: 2hu4 B: [165268]
        automated match to d1a14n_
        complexed with g39
      3. 1802664Domain d2hu4c_: 2hu4 C: [165269]
        automated match to d1a14n_
        complexed with g39
      4. 1802665Domain d2hu4d_: 2hu4 D: [165270]
        automated match to d1a14n_
        complexed with g39
      5. 1802666Domain d2hu4e_: 2hu4 E: [165271]
        automated match to d1a14n_
        complexed with g39
      6. 1802667Domain d2hu4f_: 2hu4 F: [165272]
        automated match to d1a14n_
        complexed with g39
      7. 1802668Domain d2hu4g_: 2hu4 G: [165273]
        automated match to d1a14n_
        complexed with g39
      8. 1802669Domain d2hu4h_: 2hu4 H: [165274]
        automated match to d1a14n_
        complexed with g39
    11. Domains for 3b7e:
      1. 1802610Domain d3b7ea_: 3b7e A: [172456]
        automated match to d1nmbn_
        complexed with ca, gol, nag, zmr
      2. 1802611Domain d3b7eb_: 3b7e B: [172457]
        automated match to d1nmbn_
        complexed with ca, gol, nag, zmr
    12. Domains for 3beq:
      1. 1802612Domain d3beqa_: 3beq A: [172573]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
      2. 1802613Domain d3beqb_: 3beq B: [172574]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
    13. Domain for 3ckz:
    14. Domain for 3cl0:
    15. Domains for 3cl2:
      1. 1802670Domain d3cl2a_: 3cl2 A: [173295]
        automated match to d5nn9a_
        complexed with g39
      2. 1802671Domain d3cl2b_: 3cl2 B: [173296]
        automated match to d5nn9a_
        complexed with g39
      3. 1802672Domain d3cl2c_: 3cl2 C: [173297]
        automated match to d5nn9a_
        complexed with g39
      4. 1802673Domain d3cl2d_: 3cl2 D: [173298]
        automated match to d5nn9a_
        complexed with g39
      5. 1802674Domain d3cl2e_: 3cl2 E: [173299]
        automated match to d5nn9a_
        complexed with g39
      6. 1802675Domain d3cl2f_: 3cl2 F: [173300]
        automated match to d5nn9a_
        complexed with g39
      7. 1802676Domain d3cl2g_: 3cl2 G: [173301]
        automated match to d5nn9a_
        complexed with g39
      8. 1802677Domain d3cl2h_: 3cl2 H: [173302]
        automated match to d5nn9a_
        complexed with g39
    16. Domains for 3cye:
      1. 1802614Domain d3cyea_: 3cye A: [173541]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
      2. 1802615Domain d3cyeb_: 3cye B: [173542]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
    17. Domain for 4b7j:
    18. Domain for 4d8s:
    19. Domains for 4fvk:
      1. 1802633Domain d4fvka_: 4fvk A: [194690]
        automated match to d3b7ea_
        complexed with ca, nag, zn
      2. 1802634Domain d4fvkb_: 4fvk B: [202140]
        automated match to d4fvka_
        complexed with ca, nag, zn
    20. Domain for 4gb1:
    21. Domains for 4gdi:
      1. 1802626Domain d4gdia_: 4gdi A: [202241]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      2. 1802627Domain d4gdib_: 4gdi B: [193498]
        automated match to d3b7ea_
        complexed with ca, gol, nag, no3
      3. 1802628Domain d4gdic_: 4gdi C: [202242]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      4. 1802629Domain d4gdid_: 4gdi D: [202243]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      5. 1802630Domain d4gdie_: 4gdi E: [202244]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      6. 1802631Domain d4gdif_: 4gdi F: [202245]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
    22. Domains for 4gdj:
      1. 1802621Domain d4gdja_: 4gdj A: [194626]
        automated match to d3b7ea_
        complexed with ca, nag
      2. 1802622Domain d4gdjb_: 4gdj B: [194624]
        automated match to d3b7ea_
        complexed with ca, nag
      3. 1802623Domain d4gdjc_: 4gdj C: [194623]
        automated match to d3b7ea_
        complexed with ca, nag
      4. 1802624Domain d4gdjd_: 4gdj D: [194625]
        automated match to d3b7ea_
        complexed with ca, nag
    23. Domains for 4gez:
      1. 1802650Domain d4geza_: 4gez A: [202249]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      2. 1802651Domain d4gezb_: 4gez B: [202250]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      3. 1802652Domain d4gezc_: 4gez C: [202251]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      4. 1802653Domain d4gezd_: 4gez D: [202252]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      5. 1802654Domain d4geze_: 4gez E: [202253]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      6. 1802655Domain d4gezf_: 4gez F: [202254]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      7. 1802656Domain d4gezg_: 4gez G: [202255]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      8. 1802657Domain d4gezh_: 4gez H: [202256]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      9. 1802658Domain d4gezi_: 4gez I: [202257]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      10. 1802659Domain d4gezj_: 4gez J: [202258]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      11. 1802660Domain d4gezk_: 4gez K: [193497]
        automated match to d3b7ea_
        complexed with ca, fuc, nag
      12. 1802661Domain d4gezl_: 4gez L: [202259]
        automated match to d4gezk_
        complexed with ca, fuc, nag
    24. Domain for 4hzv:
    25. Domain for 4hzw:
    26. Domain for 4hzx:
    27. Domain for 4hzy:
    28. Domain for 4hzz:
    29. Domain for 4i00:
    30. Domains for 4k3y:
      1. 1802680Domain d4k3ya_: 4k3y A: [228465]
        automated match to d3ti4a_
        complexed with ca
      2. 1802681Domain d4k3yb_: 4k3y B: [235091]
        automated match to d4k3ya_
        complexed with ca
      3. 1802682Domain d4k3yc_: 4k3y C: [235092]
        automated match to d4k3ya_
        complexed with ca
      4. 1802683Domain d4k3yd_: 4k3y D: [228464]
        automated match to d3ti4a_
        complexed with ca
    31. Domains for 4mc7:
      1. 1802695Domain d4mc7a_: 4mc7 A: [228535]
        automated match to d3ti4a_
        complexed with ca, nag
      2. 1802696Domain d4mc7b_: 4mc7 B: [235593]
        automated match to d4mc7a_
        complexed with ca, nag
      3. 1802697Domain d4mc7c_: 4mc7 C: [235591]
        automated match to d4mc7a_
        complexed with ca, nag
      4. 1802698Domain d4mc7d_: 4mc7 D: [235594]
        automated match to d4mc7a_
        complexed with ca, nag
  7. 1802699Influenza a virus [TaxId:385580] [228660] (8 PDB entries)
    1. Domain for 4ks1:
    2. Domain for 4ks2:
    3. Domain for 4ks3:
    4. Domain for 4ks4:
    5. Domain for 4ks5:
    6. Domain for 4m3m:
    7. Domain for 4mju:
    8. Domain for 4mjv:
  8. 1802708Influenza A virus [TaxId:385582] [189809] (3 PDB entries)
    1. Domains for 3sal:
      1. 1802709Domain d3sala_: 3sal A: [200601]
        automated match to d3ti8a_
        complexed with ca, gol
      2. 1802710Domain d3salb_: 3sal B: [193662]
        automated match to d3ti8a_
        complexed with ca, gol
    2. Domains for 3san:
      1. 1802711Domain d3sana_: 3san A: [216263]
        automated match to d3ti8a_
        complexed with ca, gol, nag, zmr
      2. 1802712Domain d3sanb_: 3san B: [216264]
        automated match to d3ti8a_
        complexed with ca, gol, nag, zmr
    3. Domains for 3ti8:
      1. 1802713Domain d3ti8a_: 3ti8 A: [185855]
        automated match to d2aepa1
        complexed with ca, lnv, nag
      2. 1802714Domain d3ti8b_: 3ti8 B: [185856]
        automated match to d2aepa1
        complexed with ca, lnv, nag
  9. 1802715Influenza A virus [TaxId:641501] [189475] (6 PDB entries)
    1. Domains for 3nss:
      1. 1802724Domain d3nssa_: 3nss A: [182526]
        automated match to d1a14n_
        complexed with act, ca, nag
      2. 1802725Domain d3nssb_: 3nss B: [182527]
        automated match to d1a14n_
        complexed with act, ca, nag
    2. Domains for 3ti3:
      1. 1802720Domain d3ti3a_: 3ti3 A: [185847]
        automated match to d1a14n_
        complexed with act, ca, gol, lnv, nag
      2. 1802721Domain d3ti3b_: 3ti3 B: [185848]
        automated match to d1a14n_
        complexed with act, ca, gol, lnv, nag
    3. Domains for 3ti4:
      1. 1802716Domain d3ti4a_: 3ti4 A: [185849]
        automated match to d1a14n_
        complexed with act, ca, gol, lvo, nag
      2. 1802717Domain d3ti4b_: 3ti4 B: [185850]
        automated match to d1a14n_
        complexed with act, ca, gol, lvo, nag
    4. Domains for 3ti5:
      1. 1802722Domain d3ti5a_: 3ti5 A: [185851]
        automated match to d1a14n_
        complexed with act, ca, gol, nag, zmr
      2. 1802723Domain d3ti5b_: 3ti5 B: [185852]
        automated match to d1a14n_
        complexed with act, ca, gol, nag, zmr
    5. Domains for 3ti6:
      1. 1802718Domain d3ti6a_: 3ti6 A: [185853]
        automated match to d1a14n_
        complexed with act, ca, g39, gol, nag
      2. 1802719Domain d3ti6b_: 3ti6 B: [185854]
        automated match to d1a14n_
        complexed with act, ca, g39, gol, nag
    6. Domains for 4qnp:
      1. 1802726Domain d4qnpa_: 4qnp A: [269289]
        Other proteins in same PDB: d4qnpf1, d4qnpf2, d4qnpl1, d4qnpl2
        automated match to d3ti4a_
        complexed with ca, nag
      2. 1802727Domain d4qnpb_: 4qnp B: [269290]
        Other proteins in same PDB: d4qnpf1, d4qnpf2, d4qnpl1, d4qnpl2
        automated match to d3ti4a_
        complexed with ca, nag
  10. 1802728Streptococcus pneumoniae [TaxId:1313] [277389] (8 PDB entries)
    1. Domains for 4yw0:
      1. 1802733Domain d4yw0a2: 4yw0 A:274-741 [277408]
        Other proteins in same PDB: d4yw0a1, d4yw0b1
        automated match to d2slia2
        complexed with fsi, gol, sfj
      2. 1802734Domain d4yw0b2: 4yw0 B:274-741 [277406]
        Other proteins in same PDB: d4yw0a1, d4yw0b1
        automated match to d2slia2
        complexed with fsi, gol, sfj
    2. Domains for 4yw1:
      1. 1802739Domain d4yw1a2: 4yw1 A:274-741 [277410]
        Other proteins in same PDB: d4yw1a1, d4yw1b1
        automated match to d2slia2
        complexed with dan, gol, peg, po4, sia
      2. 1802740Domain d4yw1b2: 4yw1 B:274-741 [277412]
        Other proteins in same PDB: d4yw1a1, d4yw1b1
        automated match to d2slia2
        complexed with dan, gol, peg, po4, sia
    3. Domains for 4yw2:
      1. 1802729Domain d4yw2a2: 4yw2 A:274-741 [277396]
        Other proteins in same PDB: d4yw2a1, d4yw2b1
        automated match to d2slia2
        complexed with gal, gol, peg, po4, sia
      2. 1802730Domain d4yw2b2: 4yw2 B:274-741 [277398]
        Other proteins in same PDB: d4yw2a1, d4yw2b1
        automated match to d2slia2
        complexed with gal, gol, peg, po4, sia
    4. Domains for 4yw3:
      1. 1802731Domain d4yw3a2: 4yw3 A:274-741 [277402]
        Other proteins in same PDB: d4yw3a1, d4yw3b1
        automated match to d2slia2
        complexed with dan, gol, po4, sia
      2. 1802732Domain d4yw3b2: 4yw3 B:274-741 [277404]
        Other proteins in same PDB: d4yw3a1, d4yw3b1
        automated match to d2slia2
        complexed with dan, gol, po4, sia
    5. Domains for 4yw5:
      1. 1802743Domain d4yw5a2: 4yw5 A:274-741 [277392]
        Other proteins in same PDB: d4yw5a1, d4yw5b1
        automated match to d2slia2
        complexed with edo, g39, gol
      2. 1802744Domain d4yw5b2: 4yw5 B:274-741 [277390]
        Other proteins in same PDB: d4yw5a1, d4yw5b1
        automated match to d2slia2
        complexed with edo, g39, gol
    6. Domains for 4yz2:
      1. 1802735Domain d4yz2a2: 4yz2 A:274-740 [277426]
        Other proteins in same PDB: d4yz2a1, d4yz2b1
        automated match to d2slia2
        complexed with dan, so4
      2. 1802736Domain d4yz2b2: 4yz2 B:274-740 [277432]
        Other proteins in same PDB: d4yz2a1, d4yz2b1
        automated match to d2slia2
        complexed with dan, so4
    7. Domains for 4yz4:
      1. 1802737Domain d4yz4a2: 4yz4 A:274-740 [277436]
        Other proteins in same PDB: d4yz4a1, d4yz4b1
        automated match to d2slia2
        complexed with sia, so4
      2. 1802738Domain d4yz4b2: 4yz4 B:274-740 [277440]
        Other proteins in same PDB: d4yz4a1, d4yz4b1
        automated match to d2slia2
        complexed with sia, so4
    8. Domains for 4yz5:
      1. 1802741Domain d4yz5a2: 4yz5 A:274-740 [277438]
        Other proteins in same PDB: d4yz5a1, d4yz5b1
        automated match to d2slia2
        complexed with dan, slt, so4
      2. 1802742Domain d4yz5b2: 4yz5 B:274-740 [277445]
        Other proteins in same PDB: d4yz5a1, d4yz5b1
        automated match to d2slia2
        complexed with dan, slt, so4
  11. 1802745Streptococcus pneumoniae [TaxId:170187] [277429] (1 PDB entry)

More info for Protein automated matches from b.68.1.0: automated matches

Timeline for Protein automated matches from b.68.1.0: automated matches: