Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2064980Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 2064981Superfamily b.68.1: Sialidases [50939] (3 families) (S)
  5. 2065391Family b.68.1.0: automated matches [191452] (1 protein)
    not a true family
  6. 2065392Protein automated matches [190692] (15 species)
    not a true protein

Species:

  1. 2065393Enterobacteria phage [TaxId:948870] [236008] (1 PDB entry)
  2. 2065397Influenza a virus (a/california/07/2009(h1n1)) [TaxId:641809] [193484] (2 PDB entries)
    1. Domains for 4b7q:
      1. 2065402Domain d4b7qa_: 4b7q A: [251180]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
      2. 2065403Domain d4b7qb_: 4b7q B: [251181]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
      3. 2065404Domain d4b7qc_: 4b7q C: [251182]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
      4. 2065405Domain d4b7qd_: 4b7q D: [251183]
        automated match to d4b7ra_
        complexed with ca, nag, zmr; mutant
    2. Domains for 4b7r:
      1. 2065398Domain d4b7ra_: 4b7r A: [201578]
        automated match to d4b7rb_
        complexed with ca, epe, g39, nag; mutant
      2. 2065399Domain d4b7rb_: 4b7r B: [193485]
        automated match to d3ti4a_
        complexed with ca, epe, g39, nag; mutant
      3. 2065400Domain d4b7rc_: 4b7r C: [201579]
        automated match to d4b7rb_
        complexed with ca, epe, g39, nag; mutant
      4. 2065401Domain d4b7rd_: 4b7r D: [201580]
        automated match to d4b7rb_
        complexed with ca, epe, g39, nag; mutant
  3. 2065406Influenza a virus (a/duck/ukraine/1/1963(h3n8)) [TaxId:385580] [189572] (2 PDB entries)
    1. Domain for 3o9j:
    2. Domain for 3o9k:
  4. 2065409Influenza a virus (a/harbor seal/massachusetts/1/2011(h3n8)) [TaxId:1136533] [311454] (3 PDB entries)
    1. Domain for 4wa3:
    2. Domain for 4wa4:
    3. Domain for 4wa5:
  5. 2065413Influenza a virus (a/mallard duck/alb/60/1976(h12n5)) [TaxId:352705] [258463] (1 PDB entry)
  6. 2065416Influenza a virus (a/netherlands/2631/2010(h1n1)) [TaxId:1027873] [256197] (2 PDB entries)
    1. Domains for 4b7m:
      1. 2065417Domain d4b7ma_: 4b7m A: [251177]
        automated match to d4b7ra_
        complexed with ca, nag, po4; mutant
      2. 2065418Domain d4b7mb_: 4b7m B: [251178]
        automated match to d4b7ra_
        complexed with ca, nag, po4; mutant
    2. Domain for 4b7n:
  7. 2065420Influenza A virus [TaxId:11320] [188445] (31 PDB entries)
    1. Domain for 2ht5:
    2. Domain for 2ht7:
    3. Domain for 2ht8:
    4. Domain for 2htq:
    5. Domain for 2htr:
    6. Domain for 2htu:
    7. Domains for 2htv:
      1. 2065504Domain d2htva_: 2htv A: [165249]
        automated match to d2bata_
        complexed with ca, nag
      2. 2065505Domain d2htvb_: 2htv B: [165250]
        automated match to d2bata_
        complexed with ca, nag
    8. Domains for 2hty:
      1. 2065453Domain d2htya_: 2hty A: [165251]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      2. 2065454Domain d2htyb_: 2hty B: [165252]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      3. 2065455Domain d2htyc_: 2hty C: [165253]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      4. 2065456Domain d2htyd_: 2hty D: [165254]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      5. 2065457Domain d2htye_: 2hty E: [165255]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      6. 2065458Domain d2htyf_: 2hty F: [165256]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      7. 2065459Domain d2htyg_: 2hty G: [165257]
        automated match to d1a14n_
        complexed with ca, nag, ndg
      8. 2065460Domain d2htyh_: 2hty H: [165258]
        automated match to d1a14n_
        complexed with ca, nag, ndg
    9. Domains for 2hu0:
      1. 2065496Domain d2hu0a_: 2hu0 A: [165259]
        automated match to d1a14n_
        complexed with g39
      2. 2065497Domain d2hu0b_: 2hu0 B: [165260]
        automated match to d1a14n_
        complexed with g39
      3. 2065498Domain d2hu0c_: 2hu0 C: [165261]
        automated match to d1a14n_
        complexed with g39
      4. 2065499Domain d2hu0d_: 2hu0 D: [165262]
        automated match to d1a14n_
        complexed with g39
      5. 2065500Domain d2hu0e_: 2hu0 E: [165263]
        automated match to d1a14n_
        complexed with g39
      6. 2065501Domain d2hu0f_: 2hu0 F: [165264]
        automated match to d1a14n_
        complexed with g39
      7. 2065502Domain d2hu0g_: 2hu0 G: [165265]
        automated match to d1a14n_
        complexed with g39
      8. 2065503Domain d2hu0h_: 2hu0 H: [165266]
        automated match to d1a14n_
        complexed with g39
    10. Domains for 2hu4:
      1. 2065473Domain d2hu4a_: 2hu4 A: [165267]
        automated match to d1a14n_
        complexed with g39
      2. 2065474Domain d2hu4b_: 2hu4 B: [165268]
        automated match to d1a14n_
        complexed with g39
      3. 2065475Domain d2hu4c_: 2hu4 C: [165269]
        automated match to d1a14n_
        complexed with g39
      4. 2065476Domain d2hu4d_: 2hu4 D: [165270]
        automated match to d1a14n_
        complexed with g39
      5. 2065477Domain d2hu4e_: 2hu4 E: [165271]
        automated match to d1a14n_
        complexed with g39
      6. 2065478Domain d2hu4f_: 2hu4 F: [165272]
        automated match to d1a14n_
        complexed with g39
      7. 2065479Domain d2hu4g_: 2hu4 G: [165273]
        automated match to d1a14n_
        complexed with g39
      8. 2065480Domain d2hu4h_: 2hu4 H: [165274]
        automated match to d1a14n_
        complexed with g39
    11. Domains for 3b7e:
      1. 2065421Domain d3b7ea_: 3b7e A: [172456]
        automated match to d1nmbn_
        complexed with ca, gol, nag, zmr
      2. 2065422Domain d3b7eb_: 3b7e B: [172457]
        automated match to d1nmbn_
        complexed with ca, gol, nag, zmr
    12. Domains for 3beq:
      1. 2065423Domain d3beqa_: 3beq A: [172573]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
      2. 2065424Domain d3beqb_: 3beq B: [172574]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
    13. Domain for 3ckz:
    14. Domain for 3cl0:
    15. Domains for 3cl2:
      1. 2065481Domain d3cl2a_: 3cl2 A: [173295]
        automated match to d5nn9a_
        complexed with g39
      2. 2065482Domain d3cl2b_: 3cl2 B: [173296]
        automated match to d5nn9a_
        complexed with g39
      3. 2065483Domain d3cl2c_: 3cl2 C: [173297]
        automated match to d5nn9a_
        complexed with g39
      4. 2065484Domain d3cl2d_: 3cl2 D: [173298]
        automated match to d5nn9a_
        complexed with g39
      5. 2065485Domain d3cl2e_: 3cl2 E: [173299]
        automated match to d5nn9a_
        complexed with g39
      6. 2065486Domain d3cl2f_: 3cl2 F: [173300]
        automated match to d5nn9a_
        complexed with g39
      7. 2065487Domain d3cl2g_: 3cl2 G: [173301]
        automated match to d5nn9a_
        complexed with g39
      8. 2065488Domain d3cl2h_: 3cl2 H: [173302]
        automated match to d5nn9a_
        complexed with g39
    16. Domains for 3cye:
      1. 2065425Domain d3cyea_: 3cye A: [173541]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
      2. 2065426Domain d3cyeb_: 3cye B: [173542]
        automated match to d1nmbn_
        complexed with act, ca, gol, nag, po4
    17. Domain for 4b7j:
    18. Domain for 4d8s:
    19. Domains for 4fvk:
      1. 2065444Domain d4fvka_: 4fvk A: [194690]
        automated match to d3b7ea_
        complexed with ca, nag, zn
      2. 2065445Domain d4fvkb_: 4fvk B: [202140]
        automated match to d4fvka_
        complexed with ca, nag, zn
    20. Domain for 4gb1:
    21. Domains for 4gdi:
      1. 2065437Domain d4gdia_: 4gdi A: [202241]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      2. 2065438Domain d4gdib_: 4gdi B: [193498]
        automated match to d3b7ea_
        complexed with ca, gol, nag, no3
      3. 2065439Domain d4gdic_: 4gdi C: [202242]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      4. 2065440Domain d4gdid_: 4gdi D: [202243]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      5. 2065441Domain d4gdie_: 4gdi E: [202244]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
      6. 2065442Domain d4gdif_: 4gdi F: [202245]
        automated match to d4gdib_
        complexed with ca, gol, nag, no3
    22. Domains for 4gdj:
      1. 2065432Domain d4gdja_: 4gdj A: [194626]
        automated match to d3b7ea_
        complexed with ca, nag
      2. 2065433Domain d4gdjb_: 4gdj B: [194624]
        automated match to d3b7ea_
        complexed with ca, nag
      3. 2065434Domain d4gdjc_: 4gdj C: [194623]
        automated match to d3b7ea_
        complexed with ca, nag
      4. 2065435Domain d4gdjd_: 4gdj D: [194625]
        automated match to d3b7ea_
        complexed with ca, nag
    23. Domains for 4gez:
      1. 2065461Domain d4geza_: 4gez A: [202249]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      2. 2065462Domain d4gezb_: 4gez B: [202250]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      3. 2065463Domain d4gezc_: 4gez C: [202251]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      4. 2065464Domain d4gezd_: 4gez D: [202252]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      5. 2065465Domain d4geze_: 4gez E: [202253]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      6. 2065466Domain d4gezf_: 4gez F: [202254]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      7. 2065467Domain d4gezg_: 4gez G: [202255]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      8. 2065468Domain d4gezh_: 4gez H: [202256]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      9. 2065469Domain d4gezi_: 4gez I: [202257]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      10. 2065470Domain d4gezj_: 4gez J: [202258]
        automated match to d4gezk_
        complexed with ca, fuc, nag
      11. 2065471Domain d4gezk_: 4gez K: [193497]
        automated match to d3b7ea_
        complexed with ca, fuc, nag
      12. 2065472Domain d4gezl_: 4gez L: [202259]
        automated match to d4gezk_
        complexed with ca, fuc, nag
    24. Domain for 4hzv:
    25. Domain for 4hzw:
    26. Domain for 4hzx:
    27. Domain for 4hzy:
    28. Domain for 4hzz:
    29. Domain for 4i00:
    30. Domains for 4k3y:
      1. 2065491Domain d4k3ya_: 4k3y A: [228465]
        automated match to d3ti4a_
        complexed with ca
      2. 2065492Domain d4k3yb_: 4k3y B: [235091]
        automated match to d4k3ya_
        complexed with ca
      3. 2065493Domain d4k3yc_: 4k3y C: [235092]
        automated match to d4k3ya_
        complexed with ca
      4. 2065494Domain d4k3yd_: 4k3y D: [228464]
        automated match to d3ti4a_
        complexed with ca
    31. Domains for 4mc7:
      1. 2065506Domain d4mc7a_: 4mc7 A: [228535]
        automated match to d3ti4a_
        complexed with ca, nag
      2. 2065507Domain d4mc7b_: 4mc7 B: [235593]
        automated match to d4mc7a_
        complexed with ca, nag
      3. 2065508Domain d4mc7c_: 4mc7 C: [235591]
        automated match to d4mc7a_
        complexed with ca, nag
      4. 2065509Domain d4mc7d_: 4mc7 D: [235594]
        automated match to d4mc7a_
        complexed with ca, nag
  8. 2065510Influenza a virus [TaxId:385580] [228660] (8 PDB entries)
    1. Domain for 4ks1:
    2. Domain for 4ks2:
    3. Domain for 4ks3:
    4. Domain for 4ks4:
    5. Domain for 4ks5:
    6. Domain for 4m3m:
    7. Domain for 4mju:
    8. Domain for 4mjv:
  9. 2065519Influenza A virus [TaxId:385582] [189809] (3 PDB entries)
    1. Domains for 3sal:
      1. 2065520Domain d3sala_: 3sal A: [200601]
        automated match to d3ti8a_
        complexed with ca, gol
      2. 2065521Domain d3salb_: 3sal B: [193662]
        automated match to d3ti8a_
        complexed with ca, gol
    2. Domains for 3san:
      1. 2065522Domain d3sana_: 3san A: [216263]
        automated match to d3ti8a_
        complexed with ca, gol, nag, zmr
      2. 2065523Domain d3sanb_: 3san B: [216264]
        automated match to d3ti8a_
        complexed with ca, gol, nag, zmr
    3. Domains for 3ti8:
      1. 2065524Domain d3ti8a_: 3ti8 A: [185855]
        automated match to d2aepa1
        complexed with ca, lnv, nag
      2. 2065525Domain d3ti8b_: 3ti8 B: [185856]
        automated match to d2aepa1
        complexed with ca, lnv, nag
  10. 2065526Influenza A virus [TaxId:641501] [189475] (6 PDB entries)
    1. Domains for 3nss:
      1. 2065535Domain d3nssa_: 3nss A: [182526]
        automated match to d1a14n_
        complexed with act, ca, nag
      2. 2065536Domain d3nssb_: 3nss B: [182527]
        automated match to d1a14n_
        complexed with act, ca, nag
    2. Domains for 3ti3:
      1. 2065531Domain d3ti3a_: 3ti3 A: [185847]
        automated match to d1a14n_
        complexed with act, ca, gol, lnv, nag
      2. 2065532Domain d3ti3b_: 3ti3 B: [185848]
        automated match to d1a14n_
        complexed with act, ca, gol, lnv, nag
    3. Domains for 3ti4:
      1. 2065527Domain d3ti4a_: 3ti4 A: [185849]
        automated match to d1a14n_
        complexed with act, ca, gol, lvo, nag
      2. 2065528Domain d3ti4b_: 3ti4 B: [185850]
        automated match to d1a14n_
        complexed with act, ca, gol, lvo, nag
    4. Domains for 3ti5:
      1. 2065533Domain d3ti5a_: 3ti5 A: [185851]
        automated match to d1a14n_
        complexed with act, ca, gol, nag, zmr
      2. 2065534Domain d3ti5b_: 3ti5 B: [185852]
        automated match to d1a14n_
        complexed with act, ca, gol, nag, zmr
    5. Domains for 3ti6:
      1. 2065529Domain d3ti6a_: 3ti6 A: [185853]
        automated match to d1a14n_
        complexed with act, ca, g39, gol, nag
      2. 2065530Domain d3ti6b_: 3ti6 B: [185854]
        automated match to d1a14n_
        complexed with act, ca, g39, gol, nag
    6. Domains for 4qnp:
      1. 2065537Domain d4qnpa_: 4qnp A: [269289]
        Other proteins in same PDB: d4qnpf1, d4qnpf2, d4qnpl1, d4qnpl2
        automated match to d3ti4a_
        complexed with ca, nag
      2. 2065538Domain d4qnpb_: 4qnp B: [269290]
        Other proteins in same PDB: d4qnpf1, d4qnpf2, d4qnpl1, d4qnpl2
        automated match to d3ti4a_
        complexed with ca, nag
  11. 2065539Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [277389] (9 PDB entries)
    1. Domains for 4yw1:
      1. 2065550Domain d4yw1a2: 4yw1 A:274-740 [277410]
        Other proteins in same PDB: d4yw1a1, d4yw1a3, d4yw1b1, d4yw1b3
        automated match to d2slia2
        complexed with dan, gol, peg, po4, sia
      2. 2065551Domain d4yw1b2: 4yw1 B:274-740 [277412]
        Other proteins in same PDB: d4yw1a1, d4yw1a3, d4yw1b1, d4yw1b3
        automated match to d2slia2
        complexed with dan, gol, peg, po4, sia
    2. Domains for 4yw2:
      1. 2065540Domain d4yw2a2: 4yw2 A:274-740 [277396]
        Other proteins in same PDB: d4yw2a1, d4yw2a3, d4yw2b1, d4yw2b3
        automated match to d2slia2
        complexed with gal, gol, peg, po4, sia
      2. 2065541Domain d4yw2b2: 4yw2 B:274-740 [277398]
        Other proteins in same PDB: d4yw2a1, d4yw2a3, d4yw2b1, d4yw2b3
        automated match to d2slia2
        complexed with gal, gol, peg, po4, sia
    3. Domains for 4yw3:
      1. 2065542Domain d4yw3a2: 4yw3 A:274-740 [277402]
        Other proteins in same PDB: d4yw3a1, d4yw3a3, d4yw3b1, d4yw3b3
        automated match to d2slia2
        complexed with dan, gol, po4, sia
      2. 2065543Domain d4yw3b2: 4yw3 B:274-740 [277404]
        Other proteins in same PDB: d4yw3a1, d4yw3a3, d4yw3b1, d4yw3b3
        automated match to d2slia2
        complexed with dan, gol, po4, sia
    4. Domains for 4yw4:
      1. 2273266Domain d4yw4b2: 4yw4 B:274-740 [316567]
        Other proteins in same PDB: d4yw4a1, d4yw4a3, d4yw4b1, d4yw4b3
        automated match to d4yw2a2
        complexed with gol, po4
      2. 2273399Domain d4yw4a2: 4yw4 A:274-740 [316700]
        Other proteins in same PDB: d4yw4a1, d4yw4a3, d4yw4b1, d4yw4b3
        automated match to d4yw2a2
        complexed with gol, po4
    5. Domains for 4yw5:
      1. 2065554Domain d4yw5a2: 4yw5 A:274-740 [277392]
        Other proteins in same PDB: d4yw5a1, d4yw5a3, d4yw5b1, d4yw5b3
        automated match to d2slia2
        complexed with edo, g39, gol
      2. 2065555Domain d4yw5b2: 4yw5 B:274-740 [277390]
        Other proteins in same PDB: d4yw5a1, d4yw5a3, d4yw5b1, d4yw5b3
        automated match to d2slia2
        complexed with edo, g39, gol
    6. Domains for 4yz2:
      1. 2065546Domain d4yz2a2: 4yz2 A:274-740 [277426]
        Other proteins in same PDB: d4yz2a1, d4yz2b1, d4yz2b3
        automated match to d2slia2
        complexed with dan, so4
      2. 2065547Domain d4yz2b2: 4yz2 B:274-740 [277432]
        Other proteins in same PDB: d4yz2a1, d4yz2b1, d4yz2b3
        automated match to d2slia2
        complexed with dan, so4
    7. Domains for 4yz4:
      1. 2065548Domain d4yz4a2: 4yz4 A:274-740 [277436]
        Other proteins in same PDB: d4yz4a1, d4yz4a3, d4yz4b1, d4yz4b3
        automated match to d2slia2
        complexed with sia, so4
      2. 2065549Domain d4yz4b2: 4yz4 B:274-740 [277440]
        Other proteins in same PDB: d4yz4a1, d4yz4a3, d4yz4b1, d4yz4b3
        automated match to d2slia2
        complexed with sia, so4
    8. Domains for 4yz5:
      1. 2065552Domain d4yz5a2: 4yz5 A:274-740 [277438]
        Other proteins in same PDB: d4yz5a1, d4yz5b1, d4yz5b3
        automated match to d2slia2
        complexed with dan, slt, so4
      2. 2065553Domain d4yz5b2: 4yz5 B:274-740 [277445]
        Other proteins in same PDB: d4yz5a1, d4yz5b1, d4yz5b3
        automated match to d2slia2
        complexed with dan, slt, so4
    9. Domains for 5f9t:
      1. 2065544Domain d5f9ta2: 5f9t A:274-740 [310535]
        Other proteins in same PDB: d5f9ta1, d5f9ta3, d5f9tb1, d5f9tb3
        automated match to d2slia2
        complexed with fsi, gol, sfj
      2. 2065545Domain d5f9tb2: 5f9t B:274-740 [310538]
        Other proteins in same PDB: d5f9ta1, d5f9ta3, d5f9tb1, d5f9tb3
        automated match to d2slia2
        complexed with fsi, gol, sfj
  12. 2065556Streptococcus pneumoniae [TaxId:170187] [277429] (2 PDB entries)
    1. Domains for 4yz1:
      1. 2065557Domain d4yz1a2: 4yz1 A:274-740 [277430]
        Other proteins in same PDB: d4yz1a1, d4yz1b1, d4yz1b3
        automated match to d2slia2
        complexed with so4
      2. 2065558Domain d4yz1b2: 4yz1 B:274-740 [277434]
        Other proteins in same PDB: d4yz1a1, d4yz1b1, d4yz1b3
        automated match to d2slia2
        complexed with so4
    2. Domains for 4yz3:
      1. 2273164Domain d4yz3a2: 4yz3 A:274-740 [316466]
        Other proteins in same PDB: d4yz3a1, d4yz3b1, d4yz3b3
        automated match to d4yw2a2
        complexed with g39, so4
      2. 2273165Domain d4yz3b2: 4yz3 B:274-740 [316465]
        Other proteins in same PDB: d4yz3a1, d4yz3b1, d4yz3b3
        automated match to d4yw2a2
        complexed with g39, so4
  13. 2272096Influenza a virus (a/american green-winged teal/washington/195750/2014(h5n1)) [TaxId:1609053] [315397] (1 PDB entry)
  14. 2272209Influenza a virus (a/gyrfalcon/washington/41088-6/2014(h5n8)) [TaxId:1589663] [315510] (1 PDB entry)
  15. 2293528Mojiang virus [TaxId:1474807] [336829] (1 PDB entry)

More info for Protein automated matches from b.68.1.0: automated matches

Timeline for Protein automated matches from b.68.1.0: automated matches: