Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.103: Citrate synthase [48255] (1 superfamily)
    multihelical; consists of two all-alpha domains
  4. Superfamily a.103.1: Citrate synthase [48256] (2 families) (S)
  5. Family a.103.1.1: Citrate synthase [48257] (2 proteins)
    duplication: large domain consists of two structural repeats
    the second repeat is interrupted by the small domain
    automatically mapped to Pfam PF00285
  6. Protein automated matches [190675] (10 species)
    not a true protein

Species:

  1. Acetobacter aceti [TaxId:435] [187782] (1 PDB entry)
  2. Burkholderia thailandensis [TaxId:271848] [269215] (1 PDB entry)
  3. Escherichia coli [TaxId:562] [311311] (2 PDB entries)
    1. Domains for 3l98:
      1. Domain d3l98a_: 3l98 A: [305798]
        automated match to d1nxea_
        complexed with nad, so4
      2. Domain d3l98b_: 3l98 B: [305799]
        automated match to d1nxea_
        complexed with nad, so4
    2. Domains for 3l99:
      1. Domain d3l99a_: 3l99 A: [305800]
        automated match to d1nxea_
        complexed with oaa, so4
      2. Domain d3l99b_: 3l99 B: [305801]
        automated match to d1nxea_
        complexed with oaa, so4
  4. Human (Homo sapiens) [TaxId:9606] [347927] (3 PDB entries)
    1. Domains for 5uzp:
      1. Domain d5uzpa_: 5uzp A: [348181]
        automated match to d3enja_
        complexed with oaa; mutant
      2. Domain d5uzpb_: 5uzp B: [348171]
        automated match to d3enja_
        complexed with oaa; mutant
    2. Domain for 5uzq:
    3. Domains for 5uzr:
      1. Domain d5uzra_: 5uzr A: [348029]
        automated match to d3enja_
        complexed with cl
      2. Domain d5uzrd_: 5uzr D: [347928]
        automated match to d3enja_
        complexed with cl
  5. Metallosphaera sedula [TaxId:399549] [362007] (2 PDB entries)
    1. Domain for 6abv:
    2. Domain for 6abw:
  6. Sulfolobus tokodaii [TaxId:111955] [188060] (1 PDB entry)
  7. Pig (Sus scrofa) [TaxId:9823] [347647] (1 PDB entry)
  8. Thermoplasma acidophilum [TaxId:2303] [188213] (3 PDB entries)
    1. Domains for 2ifc:
      1. Domain d2ifca_: 2ifc A: [165532]
        automated match to d1o7xc_
        complexed with oaa
      2. Domain d2ifcb_: 2ifc B: [165533]
        automated match to d1o7xc_
        complexed with oaa
      3. Domain d2ifcc_: 2ifc C: [165534]
        automated match to d1o7xc_
        complexed with oaa
      4. Domain d2ifcd_: 2ifc D: [165535]
        automated match to d1o7xc_
        complexed with oaa
    2. Domains for 2r26:
      1. Domain d2r26a_: 2r26 A: [167930]
        automated match to d1o7xc_
        complexed with cmc, oaa
      2. Domain d2r26b_: 2r26 B: [167931]
        automated match to d1o7xc_
        complexed with cmc, oaa
      3. Domain d2r26c_: 2r26 C: [167932]
        automated match to d1o7xc_
        complexed with cmc, oaa
      4. Domain d2r26d_: 2r26 D: [167933]
        automated match to d1o7xc_
        complexed with cmc, oaa
    3. Domains for 2r9e:
      1. Domain d2r9ea_: 2r9e A: [168025]
        automated match to d1o7xc_
        complexed with sdx
      2. Domain d2r9eb_: 2r9e B: [168026]
        automated match to d1o7xc_
        complexed with sdx
      3. Domain d2r9ec_: 2r9e C: [168027]
        automated match to d1o7xc_
        complexed with sdx
      4. Domain d2r9ed_: 2r9e D: [168028]
        automated match to d1o7xc_
        complexed with sdx
  9. Thermoplasma acidophilum [TaxId:273075] [276610] (1 PDB entry)
  10. Vibrio vulnificus [TaxId:216895] [195719] (1 PDB entry)

More info for Protein automated matches from a.103.1.1: Citrate synthase

Timeline for Protein automated matches from a.103.1.1: Citrate synthase: