Species:

1. Bacillus subtilis [TaxId:1423] [188288] (2 PDB entries)

   1. Domains for 3bem:

      1. Domain d3bema_: 3bem A: [172571] automated match to d2b67a1 complexed with act, fmn, ni, pgo

      2. Domain d3bemb_: 3bem B: [172572] automated match to d2b67a1 complexed with act, fmn, ni, pgo

   2. Domains for 3n2s:

      1. Domain d3n2sa_: 3n2s A: [181848] automated match to d1bkja_ complexed with cl, fmn

      2. Domain d3n2sb_: 3n2s B: [181849] automated match to d1bkja_ complexed with cl, fmn

      3. Domain d3n2sc_: 3n2s C: [181850] automated match to d1bkja_ complexed with cl, fmn

      4. Domain d3n2sd_: 3n2s D: [181851] automated match to d1bkja_ complexed with cl, fmn

2. Bacteroides fragilis [TaxId:272559] [188633] (1 PDB entry)

   • Domains for 3eof:

     1. Domain d3eofa_: 3eof A: [175116] automated match to d1zcha1 complexed with fmn

     2. Domain d3eofb_: 3eof B: [175117] automated match to d1zcha1 complexed with fmn

3. Bacteroides thetaiotaomicron [TaxId:226186] [232733] (1 PDB entry)

   • Domain for 3kwk:

     • Domain d3kwka_: 3kwk A: [232734] automated match to d4dn2b_ complexed with cl, fmn, unl

4. Bartonella henselae [TaxId:283166] [267839] (1 PDB entry)

   • Domains for 3gr3:

     1. Domain d3gr3a_: 3gr3 A: [264811] automated match to d3gbhc_ complexed with act, cl, edo, fmn, unl

     2. Domain d3gr3b_: 3gr3 B: [264812] automated match to d3gbhc_ complexed with act, cl, edo, fmn, unl

5. Clostridium acetobutylicum [TaxId:1488] [255806] (1 PDB entry)

   • Domains for 3e10:

     1. Domain d3e10a_: 3e10 A: [245744] automated match to d3kwka_ complexed with edo, epe, fmn

     2. Domain d3e10b_: 3e10 B: [245745] automated match to d3kwka_ complexed with edo, epe, fmn

6. Clostridium difficile [TaxId:272563] [196092] (3 PDB entries)

   1. Domains for 3eo8:

      1. Domain d3eo8a_: 3eo8 A: [199349] automated match to d3eo8f_ complexed with act, cl, fmn, gol

      2. Domain d3eo8b_: 3eo8 B: [199350] automated match to d3eo8f_ complexed with act, cl, fmn, gol

      3. Domain d3eo8c_: 3eo8 C: [199351] automated match to d3eo8f_ complexed with act, cl, fmn, gol

      4. Domain d3eo8d_: 3eo8 D: [199352] automated match to d3eo8f_ complexed with act, cl, fmn, gol

      5. Domain d3eo8e_: 3eo8 E: [199353] automated match to d3eo8f_ complexed with act, cl, fmn, gol

      6. Domain d3eo8f_: 3eo8 F: [196093] automated match to d2hayc_ complexed with act, cl, fmn, gol

   2. Domain for 3h4o:

      • Domain d3h4oa_: 3h4o A: [210878] automated match to d2b67a1 complexed with fmn, mpd, mrd

   3. Domains for 3koq:

      1. Domain d3koqa_: 3koq A: [212479] automated match to d2b67a1 complexed with cl, fmn, gol

      2. Domain d3koqb_: 3koq B: [212480] automated match to d2b67a1 complexed with cl, fmn, gol

      3. Domain d3koqc_: 3koq C: [212481] automated match to d2b67a1 complexed with cl, fmn, gol

      4. Domain d3koqd_: 3koq D: [212482] automated match to d2b67a1 complexed with cl, fmn, gol

7. Clostridium novyi [TaxId:386415] [225610] (1 PDB entry)

   • Domains for 3g14:

     1. Domain d3g14a_: 3g14 A: [210305] automated match to d3gbhc_ complexed with act, gol, so4

     2. Domain d3g14b_: 3g14 B: [210306] automated match to d3gbhc_ complexed with act, gol, so4

8. Desulfitobacterium hafniense [TaxId:272564] [233297] (1 PDB entry)

   • Domains for 3pxv:

     1. Domain d3pxva_: 3pxv A: [233298] automated match to d3eo8f_ complexed with fmn

     2. Domain d3pxvb_: 3pxv B: [233299] automated match to d3eo8f_ complexed with fmn

     3. Domain d3pxvc_: 3pxv C: [233300] automated match to d3eo8f_ complexed with fmn

     4. Domain d3pxvd_: 3pxv D: [233301] automated match to d3eo8f_ complexed with fmn

9. Exiguobacterium sibiricum [TaxId:262543] [188806] (1 PDB entry)

   • Domains for 3ge6:

     1. Domain d3ge6a_: 3ge6 A: [176567] automated match to d2b67a1 complexed with fmn

     2. Domain d3ge6b_: 3ge6 B: [176568] automated match to d2b67a1 complexed with fmn

10. Geobacter metallireducens [TaxId:269799] [226309] (1 PDB entry)

    • Domains for 4dn2:

      1. Domain d4dn2a_: 4dn2 A: [219867] automated match to d3bema_ complexed with fmn

      2. Domain d4dn2b_: 4dn2 B: [219868] automated match to d3bema_ complexed with fmn

11. Geobacter sulfurreducens [TaxId:243231] [226431] (1 PDB entry)

    • Domains for 4g8s:

      1. Domain d4g8sa_: 4g8s A: [221787] automated match to d2b67a1 complexed with fmn, gol

      2. Domain d4g8sb_: 4g8s B: [221788] automated match to d2b67a1 complexed with fmn, gol

12. Helicobacter pylori [TaxId:210] [187778] (2 PDB entries)

    1. Domain for 2h0u:

       • Domain d2h0ua_: 2h0u A: [164891] automated match to d1v5ya1 complexed with fmn

    2. Domains for 3qdl:

       1. Domain d3qdla_: 3qdl A: [215186] automated match to d3ge6a_ complexed with fmn, gol

       2. Domain d3qdlb_: 3qdl B: [215187] automated match to d3ge6a_ complexed with fmn, gol

       3. Domain d3qdlc_: 3qdl C: [215188] automated match to d3ge6a_ complexed with fmn, gol

       4. Domain d3qdld_: 3qdl D: [215189] automated match to d3ge6a_ complexed with fmn, gol

13. Idiomarina loihiensis [TaxId:135577] [189444] (1 PDB entry)

    • Domains for 3of4:

      1. Domain d3of4a_: 3of4 A: [182988] automated match to d1kqba_ complexed with act, fad, fmn, gol, so4, unl

      2. Domain d3of4b_: 3of4 B: [182989] automated match to d1kqba_ complexed with act, fad, fmn, gol, so4, unl

      3. Domain d3of4c_: 3of4 C: [182990] automated match to d1kqba_ complexed with act, fad, fmn, gol, so4, unl

14. Lactobacillus plantarum [TaxId:1590] [269281] (2 PDB entries)

    1. Domains for 4qlx:

       1. Domain d4qlxa_: 4qlx A: [269288] automated match to d3gbha_ complexed with cl, fmn, ktc

       2. Domain d4qlxb_: 4qlx B: [269287] automated match to d3gbha_ complexed with cl, fmn, ktc

    2. Domains for 4qly:

       1. Domain d4qlya_: 4qly A: [269284] automated match to d3gbha_ complexed with fmn

       2. Domain d4qlyb_: 4qly B: [269283] automated match to d3gbha_ complexed with fmn

       3. Domain d4qlyc_: 4qly C: [269286] automated match to d3gbha_ complexed with fmn

       4. Domain d4qlyd_: 4qly D: [269282] automated match to d3gbha_ complexed with fmn

15. Lactococcus lactis [TaxId:1358] [189386] (6 PDB entries)

    1. Domain for 2wqf:

       • Domain d2wqfa_: 2wqf A: [169566] automated match to d2ifaa1 complexed with fmn

    2. Domain for 4bn6:

       • Domain d4bn6a_: 4bn6 A: [256565] automated match to d2wqfa_ complexed with clm, fmn

    3. Domain for 4bn7:

       • Domain d4bn7a_: 4bn7 A: [265940] automated match to d2wqfa_ complexed with fmn, rlm

    4. Domain for 4bn8:

       • Domain d4bn8a_: 4bn8 A: [265941] automated match to d2wqfa_ complexed with fmn, npo

    5. Domain for 4bn9:

       • Domain d4bn9a_: 4bn9 A: [265942] automated match to d2wqfa_ complexed with fmn, nio

    6. Domain for 4bnb:

       • Domain d4bnba_: 4bnb A: [265943] automated match to d2wqfa_ complexed with fmn, yhx

16. Parabacteroides distasonis [TaxId:435591] [232883] (1 PDB entry)

    • Domains for 3m5k:

      1. Domain d3m5ka_: 3m5k A: [232884] automated match to d4dn2b_ complexed with cl, fmn, unl

      2. Domain d3m5kb_: 3m5k B: [239456] automated match to d3m5ka_ complexed with cl, fmn, unl

17. Porphyromonas gingivalis [TaxId:242619] [232279] (1 PDB entry)

    • Domains for 3ge5:

      1. Domain d3ge5a_: 3ge5 A: [232280] automated match to d4dn2a_ complexed with edo, fmn, so4, unl

      2. Domain d3ge5b_: 3ge5 B: [232281] automated match to d4dn2a_ complexed with edo, fmn, so4, unl

18. Saccharomyces cerevisiae [TaxId:4932] [271985] (1 PDB entry)

    • Domains for 4urp:

      1. Domain d4urpa_: 4urp A: [271986] automated match to d1ywqa1 mutant

      2. Domain d4urpb_: 4urp B: [271987] automated match to d1ywqa1 mutant

19. Staphylococcus epidermidis [TaxId:176280] [188805] (1 PDB entry)

    • Domains for 3gbh:

      1. Domain d3gbha_: 3gbh A: [176492] automated match to d2b67a1 complexed with ca, fmn, gol, pge, unl

      2. Domain d3gbhb_: 3gbh B: [176493] automated match to d2b67a1 complexed with ca, fmn, gol, pge, unl

      3. Domain d3gbhc_: 3gbh C: [176494] automated match to d2b67a1 complexed with ca, fmn, gol, pge, unl

      4. Domain d3gbhd_: 3gbh D: [176495] automated match to d2b67a1 complexed with ca, fmn, gol, pge, unl

20. Streptococcus mutans [TaxId:1309] [188802] (1 PDB entry)

    • Domains for 3gag:

      1. Domain d3gaga_: 3gag A: [176472] automated match to d2b67a1 complexed with fmn, gol, so4

      2. Domain d3gagb_: 3gag B: [176473] automated match to d2b67a1 complexed with fmn, gol, so4

      3. Domain d3gagc_: 3gag C: [176474] automated match to d2b67a1 complexed with fmn, gol, so4

      4. Domain d3gagd_: 3gag D: [176475] automated match to d2b67a1 complexed with fmn, gol, so4

21. Streptococcus pyogenes [TaxId:301447] [187797] (1 PDB entry)

    • Domains for 2hay:

      1. Domain d2haya_: 2hay A: [165038] automated match to d1v5ya1 complexed with fmn, so4

      2. Domain d2hayb_: 2hay B: [165039] automated match to d1v5ya1 complexed with fmn, so4

      3. Domain d2hayc_: 2hay C: [165040] automated match to d1v5ya1 complexed with fmn, so4

      4. Domain d2hayd_: 2hay D: [165041] automated match to d1v5ya1 complexed with fmn, so4

More info for Protein automated matches from d.90.1.0: automated matches

Timeline for Protein automated matches from d.90.1.0: automated matches:

• Protein automated matches from d.90.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from d.90.1.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from d.90.1.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from d.90.1.0: automated matches appears in the current release, SCOPe 2.08