Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2173456Superfamily d.58.5: GlnB-like [54913] (6 families) (S)
    form timeric structures with the orthogonally packed beta-sheets
  5. 2173457Family d.58.5.1: Prokaryotic signal transducing protein [54914] (4 protein domains)
  6. 2173531Protein automated matches [190670] (6 species)
    not a true protein

Species:

  1. 2173532Azospirillum brasilense [TaxId:192] [189362] (11 PDB entries)
    1. Domains for 3mhy:
      1. 2173536Domain d3mhya_: 3mhy A: [181233]
        automated match to d1gnka_
        complexed with akg, atp, mes, mg, pg6
      2. 2173537Domain d3mhyb_: 3mhy B: [181234]
        automated match to d1gnka_
        complexed with akg, atp, mes, mg, pg6
      3. 2173538Domain d3mhyc_: 3mhy C: [181235]
        automated match to d1gnka_
        complexed with akg, atp, mes, mg, pg6
    2. Domain for 3o5t:
    3. Domain for 4cny:
    4. Domains for 4cnz:
      1. 2173547Domain d4cnza_: 4cnz A: [257744]
        automated match to d3mhya_
        complexed with adp
      2. 2173548Domain d4cnzb_: 4cnz B: [257746]
        automated match to d3mhya_
        complexed with adp
      3. 2173549Domain d4cnzc_: 4cnz C: [257745]
        automated match to d3mhya_
        complexed with adp
      4. 2173550Domain d4cnzd_: 4cnz D: [258896]
        automated match to d3mhya_
        complexed with adp
      5. 2173551Domain d4cnze_: 4cnz E: [262601]
        automated match to d3mhya_
        complexed with adp
      6. 2173552Domain d4cnzf_: 4cnz F: [262602]
        automated match to d3mhya_
        complexed with adp
    5. Domains for 4co0:
      1. 2173544Domain d4co0a_: 4co0 A: [266004]
        automated match to d3mhya_
        complexed with adp, tla
      2. 2173545Domain d4co0b_: 4co0 B: [266005]
        automated match to d3mhya_
        complexed with adp, tla
    6. Domains for 4co1:
      1. 2173539Domain d4co1a_: 4co1 A: [266006]
        automated match to d3mhya_
        complexed with adp
      2. 2173540Domain d4co1b_: 4co1 B: [266007]
        automated match to d3mhya_
        complexed with adp
    7. Domains for 4co2:
      1. 2173553Domain d4co2a_: 4co2 A: [266008]
        automated match to d3mhya_
        complexed with adp, pg4
      2. 2173554Domain d4co2b_: 4co2 B: [266009]
        automated match to d3mhya_
        complexed with adp, pg4
    8. Domains for 4co3:
      1. 2173533Domain d4co3a_: 4co3 A: [266010]
        automated match to d3mhya_
        complexed with atp
      2. 2173534Domain d4co3b_: 4co3 B: [266011]
        automated match to d3mhya_
        complexed with atp
    9. Domains for 4co4:
      1. 2173541Domain d4co4a_: 4co4 A: [266012]
        automated match to d3mhya_
        complexed with amp, atp, po4
      2. 2173542Domain d4co4b_: 4co4 B: [266013]
        automated match to d3mhya_
        complexed with amp, atp, po4
      3. 2173543Domain d4co4c_: 4co4 C: [266014]
        automated match to d3mhya_
        complexed with amp, atp, po4
    10. Domain for 4co5:
    11. Domain for 5ovo:
  2. 2173556Mycobacterium tuberculosis [TaxId:1773] [189389] (1 PDB entry)
  3. 2173560Neisseria meningitidis [TaxId:122586] [187774] (1 PDB entry)
  4. 2173562Streptococcus mutans [TaxId:1309] [189585] (1 PDB entry)
  5. 2173569Synechococcus elongatus PCC 7942 [TaxId:1140] [189437] (4 PDB entries)
    1. Domain for 2xbp:
    2. Domains for 2xul:
      1. 2173589Domain d2xula1: 2xul A:1-112 [170400]
        Other proteins in same PDB: d2xula2, d2xulb2, d2xulc2, d2xuld2, d2xulf2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      2. 2173590Domain d2xulb1: 2xul B:1-112 [170401]
        Other proteins in same PDB: d2xula2, d2xulb2, d2xulc2, d2xuld2, d2xulf2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      3. 2173591Domain d2xulc1: 2xul C:1-112 [170402]
        Other proteins in same PDB: d2xula2, d2xulb2, d2xulc2, d2xuld2, d2xulf2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      4. 2173592Domain d2xuld1: 2xul D:1-112 [170403]
        Other proteins in same PDB: d2xula2, d2xulb2, d2xulc2, d2xuld2, d2xulf2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      5. 2173593Domain d2xule_: 2xul E: [170404]
        Other proteins in same PDB: d2xula2, d2xulb2, d2xulc2, d2xuld2, d2xulf2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      6. 2173594Domain d2xulf1: 2xul F:1-112 [170405]
        Other proteins in same PDB: d2xula2, d2xulb2, d2xulc2, d2xuld2, d2xulf2
        automated match to d1qy7a_
        complexed with akg, atp, mg
    3. Domains for 2xun:
      1. 2173571Domain d2xuna1: 2xun A:1-112 [304646]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      2. 2173572Domain d2xunb1: 2xun B:1-112 [304648]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      3. 2173573Domain d2xunc1: 2xun C:1-112 [304650]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      4. 2173574Domain d2xund1: 2xun D:1-112 [304652]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      5. 2173575Domain d2xune_: 2xun E: [304654]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      6. 2173576Domain d2xunf1: 2xun F:1-112 [304655]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      7. 2173577Domain d2xung1: 2xun G:1-112 [304657]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      8. 2173578Domain d2xunh_: 2xun H: [304659]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
      9. 2173579Domain d2xuni_: 2xun I: [304660]
        Other proteins in same PDB: d2xuna2, d2xunb2, d2xunc2, d2xund2, d2xunf2, d2xung2
        automated match to d2xzwa_
        complexed with akg, atp, mg
    4. Domains for 2xzw:
      1. 2173580Domain d2xzwa1: 2xzw A:1-112 [170497]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      2. 2173581Domain d2xzwb1: 2xzw B:1-112 [170498]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      3. 2173582Domain d2xzwc1: 2xzw C:1-112 [170499]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      4. 2173583Domain d2xzwd1: 2xzw D:1-112 [170500]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      5. 2173584Domain d2xzwe_: 2xzw E: [170501]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      6. 2173585Domain d2xzwf1: 2xzw F:1-112 [170502]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      7. 2173586Domain d2xzwg1: 2xzw G:1-112 [170503]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      8. 2173587Domain d2xzwh_: 2xzw H: [170504]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
      9. 2173588Domain d2xzwi_: 2xzw I: [170505]
        Other proteins in same PDB: d2xzwa2, d2xzwb2, d2xzwc2, d2xzwd2, d2xzwf2, d2xzwg2
        automated match to d1qy7a_
        complexed with akg, atp, mg
  6. 2173595Synechococcus elongatus [TaxId:32046] [189889] (2 PDB entries)
    1. Domain for 4aff:
    2. Domains for 4c3k:
      1. 2173597Domain d4c3ka1: 4c3k A:1-112 [265973]
        Other proteins in same PDB: d4c3ka2, d4c3kd2, d4c3kf2
        automated match to d2xzwa_
        complexed with adp, po4
      2. 2173598Domain d4c3kb_: 4c3k B: [265974]
        Other proteins in same PDB: d4c3ka2, d4c3kd2, d4c3kf2
        automated match to d2xzwa_
        complexed with adp, po4
      3. 2173599Domain d4c3kc_: 4c3k C: [265975]
        Other proteins in same PDB: d4c3ka2, d4c3kd2, d4c3kf2
        automated match to d2xzwa_
        complexed with adp, po4
      4. 2173600Domain d4c3kd1: 4c3k D:1-112 [265976]
        Other proteins in same PDB: d4c3ka2, d4c3kd2, d4c3kf2
        automated match to d2xzwa_
        complexed with adp, po4
      5. 2173601Domain d4c3ke_: 4c3k E: [265977]
        Other proteins in same PDB: d4c3ka2, d4c3kd2, d4c3kf2
        automated match to d2xzwa_
        complexed with adp, po4
      6. 2173602Domain d4c3kf1: 4c3k F:1-112 [265978]
        Other proteins in same PDB: d4c3ka2, d4c3kd2, d4c3kf2
        automated match to d2xzwa_
        complexed with adp, po4

More info for Protein automated matches from d.58.5.1: Prokaryotic signal transducing protein

Timeline for Protein automated matches from d.58.5.1: Prokaryotic signal transducing protein: