![]() | Class b: All beta proteins [48724] (178 folds) |
![]() | Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily) barrel, closed; n=6, S=8; greek-key duplication: consists of two domains of the same fold |
![]() | Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) ![]() |
![]() | Family b.47.1.3: Viral proteases [50596] (5 proteins) beta sheet in the first domain is opened rather than forms a barrel |
![]() | Protein automated matches [190658] (12 species) not a true protein |
![]() | Aura virus [TaxId:44158] [194195] (5 PDB entries) |
![]() | Domain d4agja_: 4agj A: [194196] automated match to d2snwa_ complexed with dio |
![]() | Domain d4agka_: 4agk A: [194197] automated match to d1kxfa_ |
![]() | Domain d4ausa1: 4aus A:110-261 [307031] Other proteins in same PDB: d4ausa2 automated match to d1kxfa_ complexed with gol |
![]() | Domain d4ausb_: 4aus B: [307033] Other proteins in same PDB: d4ausa2 automated match to d1kxfa_ complexed with gol |
![]() | Domain d4uona1: 4uon A:110-261 [257700] Other proteins in same PDB: d4uona2 automated match to d1kxfa_ complexed with gol |
![]() | Domain d4uonb_: 4uon B: [260594] Other proteins in same PDB: d4uona2 automated match to d1kxfa_ complexed with gol |
![]() | Domain d5g4ba_: 5g4b A: [319769] automated match to d1kxfa_ complexed with pze |
![]() | Chikungunya virus [TaxId:37124] [346472] (1 PDB entry) |
![]() | Domain d5h23a_: 5h23 A: [346474] automated match to d1kxfa_ complexed with bog, edo, gol, peg |
![]() | Domain d5h23b_: 5h23 B: [346634] automated match to d1kxfa_ complexed with bog, edo, gol, peg |
![]() | Hepacivirus c [TaxId:11103] [355696] (21 PDB entries) |
![]() | Domain d6cvwa1: 6cvw A:1004-1179 [355731] Other proteins in same PDB: d6cvwa2 automated match to d5epna_ complexed with fh1, so4, zn |
![]() | Domain d6cvxa1: 6cvx A:1004-1179 [355698] Other proteins in same PDB: d6cvxa2 automated match to d5epna_ complexed with fh4, gol, so4, zn |
![]() | Domain d6cvya1: 6cvy A:1004-1180 [355697] Other proteins in same PDB: d6cvya2 automated match to d5epna_ complexed with fhd, gol, so4, zn |
![]() | Domain d6diqa1: 6diq A:1004-1179 [372259] Other proteins in same PDB: d6diqa2 automated match to d5epna_ complexed with gk7, gol, so4, zn |
![]() | Domain d6dira1: 6dir A:1004-1179 [372253] Other proteins in same PDB: d6dira2 automated match to d5epna_ complexed with gka, so4, zn |
![]() | Domain d6disa1: 6dis A:1004-1180 [372206] Other proteins in same PDB: d6disa2 automated match to d5epna_ complexed with gkg, gol, so4, zn |
![]() | Domain d6dita1: 6dit A:1004-1179 [372311] Other proteins in same PDB: d6dita2 automated match to d5epna_ complexed with gkj, zn |
![]() | Domain d6diua1: 6diu A:1004-1180 [372207] Other proteins in same PDB: d6diua2 automated match to d5epna_ complexed with gkm, gol, so4, zn |
![]() | Domain d6diva1: 6div A:1004-1179 [372249] Other proteins in same PDB: d6diva2 automated match to d5epna_ complexed with gka, gol, so4, zn |
![]() | Domain d6diwa1: 6diw A:1004-1180 [372236] Other proteins in same PDB: d6diwa2 automated match to d5epna_ complexed with gkg, gol, so4, zn |
![]() | Domain d6piua1: 6piu A:1004-1179 [381777] Other proteins in same PDB: d6piua2 automated match to d5epna_ complexed with edo, ol7, zn |
![]() | Domain d6piva1: 6piv A:1004-1179 [381803] Other proteins in same PDB: d6piva2 automated match to d5epna_ complexed with edo, olj, so4, zn |
![]() | Domain d6piwa1: 6piw A:1004-1179 [381751] Other proteins in same PDB: d6piwa2 automated match to d5epna_ complexed with edo, olv, zn |
![]() | Domain d6pixa1: 6pix A:1004-1179 [381762] Other proteins in same PDB: d6pixa2 automated match to d5epna_ complexed with edo, oly, so4, zn |
![]() | Domain d6piya1: 6piy A:1004-1179 [381747] Other proteins in same PDB: d6piya2 automated match to d5epna_ complexed with edo, oms, so4, zn |
![]() | Domain d6piza1: 6piz A:1004-1179 [381790] Other proteins in same PDB: d6piza2 automated match to d5epna_ complexed with edo, gol, on4, so4, zn |
![]() | Domain d6pj0a1: 6pj0 A:1004-1179 [381784] Other proteins in same PDB: d6pj0a2 automated match to d5epna_ complexed with edo, omv, so4, zn |
![]() | Domain d6pj1a1: 6pj1 A:1004-1179 [381753] Other proteins in same PDB: d6pj1a2 automated match to d5epna_ complexed with edo, gkm, so4, zn |
![]() | Domain d6pj2a1: 6pj2 A:1004-1179 [381749] Other proteins in same PDB: d6pj2a2 automated match to d5epna_ complexed with edo, om7, so4, zn |
![]() | Domain d6ue3a1: 6ue3 A:1004-1179 [382026] Other proteins in same PDB: d6ue3a2 automated match to d5epna_ complexed with 9h4, edo, gol, so4, zn |
![]() | Domain d6vdoa1: 6vdo A:1004-1181 [397803] Other proteins in same PDB: d6vdoa2 automated match to d5epna_ complexed with bme, so4, zn; mutant |
![]() | Hepatitis c virus genotype 1a (isolate 1) [TaxId:11104] [387152] (7 PDB entries) |
![]() | Domain d6p6la1: 6p6l A:990-1179 [387175] Other proteins in same PDB: d6p6la2 automated match to d5epna_ complexed with edo, o31, so4, zn |
![]() | Domain d6p6ma1: 6p6m A:990-1180 [387163] Other proteins in same PDB: d6p6ma2 automated match to d5epna_ complexed with cl, o31, so4, zn |
![]() | Domain d6p6oa1: 6p6o A:990-1181 [387161] Other proteins in same PDB: d6p6oa2 automated match to d5epna_ complexed with cl, o31, so4, zn |
![]() | Domain d6p6ra1: 6p6r A:990-1181 [387153] Other proteins in same PDB: d6p6ra2 automated match to d5epna_ complexed with cl, edo, o31, so4, zn |
![]() | Domain d6vdla1: 6vdl A:990-1179 [397760] Other proteins in same PDB: d6vdla2 automated match to d5epna_ complexed with gol, o31, so4, zn; mutant |
![]() | Domain d6vdma1: 6vdm A:990-1181 [397906] Other proteins in same PDB: d6vdma2 automated match to d5epna_ complexed with gol, o31, so4, zn; mutant |
![]() | Domain d6vdna1: 6vdn A:990-1180 [397809] Other proteins in same PDB: d6vdna2 automated match to d5epna_ complexed with gol, so4, zn; mutant |
![]() | Hepatitis c virus genotype 3a (isolate nzl1) [TaxId:356415] [387173] (1 PDB entry) |
![]() | Domain d6p6sa_: 6p6s A: [387174] automated match to d5epna_ complexed with edo, o31, zn |
![]() | Hepatitis c virus genotype 4a (isolate ed43) [TaxId:356418] [387155] (2 PDB entries) |
![]() | Domain d6p6ta_: 6p6t A: [387165] automated match to d5epna_ complexed with o31, zn |
![]() | Domain d6p6za_: 6p6z A: [387156] automated match to d5epna_ complexed with o31, zn |
![]() | Hepatitis c virus genotype 5a (isolate sa13) [TaxId:356390] [387159] (1 PDB entry) |
![]() | Domain d6p6va_: 6p6v A: [387160] automated match to d5epna_ complexed with cl, edo, o31, zn |
![]() | Hepatitis C virus subtype 1a [TaxId:31646] [226463] (22 PDB entries) |
![]() | Domain d3su0a1: 3su0 A:986-1180 [233631] Other proteins in same PDB: d3su0a2 automated match to d3sv8a_ complexed with so4, tsv, zn |
![]() | Domain d3su1a1: 3su1 A:986-1180 [233632] Other proteins in same PDB: d3su1a2 automated match to d3sv8a_ complexed with so4, tsv, zn |
![]() | Domain d3su2a1: 3su2 A:986-1179 [233633] Other proteins in same PDB: d3su2a2 automated match to d3sv8a_ complexed with so4, tsv, zn |
![]() | Domain d3su3a1: 3su3 A:986-1180 [265370] Other proteins in same PDB: d3su3a2 automated match to d3sv6a_ complexed with so4, su3, zn |
![]() | Domain d3su5a1: 3su5 A:986-1181 [249575] Other proteins in same PDB: d3su5a2 automated match to d3su1a_ complexed with so4, su3, zn |
![]() | Domain d3su6a1: 3su6 A:986-1179 [249576] Other proteins in same PDB: d3su6a2 automated match to d3su2a_ complexed with gol, so4, su3, zn |
![]() | Domain d3suda_: 3sud A: [265371] automated match to d3sv6a_ complexed with so4, sue, zn |
![]() | Domain d3sudb_: 3sud B: [265372] automated match to d3sv6a_ complexed with so4, sue, zn |
![]() | Domain d3sudc_: 3sud C: [265373] automated match to d3sv6a_ complexed with so4, sue, zn |
![]() | Domain d3sudd_: 3sud D: [265374] automated match to d3sv6a_ complexed with so4, sue, zn |
![]() | Domain d3suea_: 3sue A: [233636] automated match to d3sv8a_ complexed with sue, zn |
![]() | Domain d3sueb_: 3sue B: [239775] automated match to d3suea_ complexed with sue, zn |
![]() | Domain d3suec_: 3sue C: [239776] automated match to d3suea_ complexed with sue, zn |
![]() | Domain d3sued_: 3sue D: [239777] automated match to d3suea_ complexed with sue, zn |
![]() | Domain d3sufa_: 3suf A: [233637] automated match to d3sv8a_ complexed with so4, sue, zn |
![]() | Domain d3sufb_: 3suf B: [239778] automated match to d3sufa_ complexed with so4, sue, zn |
![]() | Domain d3sufc_: 3suf C: [239779] automated match to d3sufa_ complexed with so4, sue, zn |
![]() | Domain d3sufd_: 3suf D: [239780] automated match to d3sufa_ complexed with so4, sue, zn |
![]() | Domain d3suga1: 3sug A:986-1181 [249577] Other proteins in same PDB: d3suga2 automated match to d3su2a_ complexed with so4, sue, zn |
![]() | Domain d3sv6a1: 3sv6 A:986-1181 [233642] Other proteins in same PDB: d3sv6a2 automated match to d3sv8a_ complexed with gol, so4, sv6, zn |
![]() | Domain d3sv7a1: 3sv7 A:986-1180 [249583] Other proteins in same PDB: d3sv7a2 automated match to d3suea_ complexed with so4, sv6, zn |
![]() | Domain d3sv8a_: 3sv8 A: [216562] automated match to d1a1qa_ complexed with gol, sv6, zn |
![]() | Domain d3sv9a1: 3sv9 A:986-1180 [233643] Other proteins in same PDB: d3sv9a2 automated match to d3sv8a_ complexed with gol, so4, sv6, zn |
![]() | Domain d4nwka_: 4nwk A: [238032] automated match to d3sv8a_ complexed with 2r8, gol, so4, zn |
![]() | Domain d4nwla1: 4nwl A:-10-182 [254029] Other proteins in same PDB: d4nwla2, d4nwlb2 automated match to d4nwka_ complexed with 2r9, zn |
![]() | Domain d4nwlb1: 4nwl B:-10-182 [254030] Other proteins in same PDB: d4nwla2, d4nwlb2 automated match to d4nwka_ complexed with 2r9, zn |
![]() | Domain d4wh6a1: 4wh6 A:1004-1180 [260293] Other proteins in same PDB: d4wh6a2 automated match to d3sv7a_ complexed with 2r9, so4, zn |
![]() | Domain d4wh8a1: 4wh8 A:1004-1179 [260466] Other proteins in same PDB: d4wh8a2, d4wh8b2 automated match to d3m5la_ complexed with 3m7, so4, zn |
![]() | Domain d4wh8b1: 4wh8 B:1004-1179 [261475] Other proteins in same PDB: d4wh8a2, d4wh8b2 automated match to d3m5la_ complexed with 3m7, so4, zn |
![]() | Domain d5voja1: 5voj A:990-1180 [335859] Other proteins in same PDB: d5voja2 automated match to d3sv8a_ complexed with 9h4, so4, zn |
![]() | Domain d5vp9a1: 5vp9 A:990-1180 [335884] Other proteins in same PDB: d5vp9a2 automated match to d3sv8a_ complexed with 9h7, so4, zn |
![]() | Domain d6c2na1: 6c2n A:990-1179 [362056] Other proteins in same PDB: d6c2na2 automated match to d5epna_ complexed with so4, tsv, zn; mutant |
![]() | Domain d6nzva1: 6nzv A:1004-1179 [370944] Other proteins in same PDB: d6nzva2 automated match to d5epna_ complexed with l9j, so4, zn |
![]() | Hepatitis C virus [TaxId:11103] [189262] (15 PDB entries) |
![]() | Domain d2k1qa1: 2k1q A:22-180 [242347] Other proteins in same PDB: d2k1qa2 automated match to d1a1qa_ protein/RNA complex; complexed with zn |
![]() | Domain d3keea_: 3kee A: [179300] automated match to d1a1qa_ complexed with 30b, gol, zn |
![]() | Domain d3keeb_: 3kee B: [179301] automated match to d1a1qa_ complexed with 30b, gol, zn |
![]() | Domain d3keec_: 3kee C: [179302] automated match to d1a1qa_ complexed with 30b, gol, zn |
![]() | Domain d3keed_: 3kee D: [179303] automated match to d1a1qa_ complexed with 30b, gol, zn |
![]() | Domain d3su4a_: 3su4 A: [233634] automated match to d3sv8a_ complexed with so4, su3, zn |
![]() | Domain d3su4b_: 3su4 B: [233635] automated match to d3sv8a_ complexed with so4, su3, zn |
![]() | Domain d4k8ba_: 4k8b A: [237959] automated match to d1a1qa_ complexed with 1rr, so4, zn |
![]() | Domain d4k8bb_: 4k8b B: [237960] automated match to d1a1qa_ complexed with 1rr, so4, zn |
![]() | Domain d4wf8a1: 4wf8 A:1004-1180 [260289] Other proteins in same PDB: d4wf8a2 automated match to d3sv6a_ complexed with 2r9, cl, zn |
![]() | Domain d5epna_: 5epn A: [280351] automated match to d3sv6a_ complexed with 5r2, so4, zn |
![]() | Domain d5epya1: 5epy A:1004-1179 [280352] Other proteins in same PDB: d5epya2 automated match to d3suga_ complexed with 5r2, so4, zn |
![]() | Domain d5eqqa1: 5eqq A:1004-1179 [280353] Other proteins in same PDB: d5eqqa2 automated match to d4wh8a_ complexed with 5rs, so4, zn |
![]() | Domain d5eqra1: 5eqr A:1004-1179 [326384] Other proteins in same PDB: d5eqra2 automated match to d5epna_ complexed with so4, tsv, zn |
![]() | Domain d5eqsa1: 5eqs A:1004-1179 [326433] Other proteins in same PDB: d5eqsa2 automated match to d5epna_ complexed with 2r9, zn |
![]() | Domain d5esba1: 5esb A:1004-1179 [326695] Other proteins in same PDB: d5esba2 automated match to d5epna_ complexed with so4, su3, zn |
![]() | Domain d5etxa1: 5etx A:1005-1180 [280361] Other proteins in same PDB: d5etxa2, d5etxb2, d5etxc2, d5etxd2 automated match to d3sv9a_ complexed with 5rs, cl, zn |
![]() | Domain d5etxb1: 5etx B:1004-1180 [280360] Other proteins in same PDB: d5etxa2, d5etxb2, d5etxc2, d5etxd2 automated match to d3sv9a_ complexed with 5rs, cl, zn |
![]() | Domain d5etxc1: 5etx C:1004-1179 [280362] Other proteins in same PDB: d5etxa2, d5etxb2, d5etxc2, d5etxd2 automated match to d3sv9a_ complexed with 5rs, cl, zn |
![]() | Domain d5etxd1: 5etx D:1006-1180 [280363] Other proteins in same PDB: d5etxa2, d5etxb2, d5etxc2, d5etxd2 automated match to d3sv9a_ complexed with 5rs, cl, zn |
![]() | Domain d6c2ma1: 6c2m A:1004-1179 [362073] Other proteins in same PDB: d6c2ma2, d6c2mb2, d6c2mc2, d6c2md2 automated match to d5epna_ complexed with so4, sue, zn |
![]() | Domain d6c2mb1: 6c2m B:1004-1179 [362179] Other proteins in same PDB: d6c2ma2, d6c2mb2, d6c2mc2, d6c2md2 automated match to d5epna_ complexed with so4, sue, zn |
![]() | Domain d6c2mc1: 6c2m C:1004-1179 [362027] Other proteins in same PDB: d6c2ma2, d6c2mb2, d6c2mc2, d6c2md2 automated match to d5epna_ complexed with so4, sue, zn |
![]() | Domain d6c2md1: 6c2m D:1004-1179 [362010] Other proteins in same PDB: d6c2ma2, d6c2mb2, d6c2mc2, d6c2md2 automated match to d5epna_ complexed with so4, sue, zn |
![]() | Domain d6c2oa1: 6c2o A:1004-1179 [362086] Other proteins in same PDB: d6c2oa2 automated match to d5epna_ complexed with gol, tsv, zn |
![]() | Domain d6nzta1: 6nzt A:1004-1179 [370937] Other proteins in same PDB: d6nzta2 automated match to d5epna_ complexed with l9p, so4, zn |
![]() | West Nile virus [TaxId:11082] [187751] (2 PDB entries) |
![]() | Domain d2ggvb_: 2ggv B: [164689] Other proteins in same PDB: d2ggva_ automated match to d2ijob1 mutant |
![]() | Domain d3e90b_: 3e90 B: [174762] Other proteins in same PDB: d3e90a_, d3e90c_ automated match to d2ijob1 protein/RNA complex; complexed with nkk |
![]() | Domain d3e90d_: 3e90 D: [174763] Other proteins in same PDB: d3e90a_, d3e90c_ automated match to d2ijob1 protein/RNA complex; complexed with nkk |
![]() | Zika virus (strain mr 766) [TaxId:64320] [324405] (8 PDB entries) |
![]() | Domain d5gj4b_: 5gj4 B: [324406] Other proteins in same PDB: d5gj4a1, d5gj4c1, d5gj4e1, d5gj4g1 automated match to d3e90d_ complexed with cl |
![]() | Domain d5gj4d_: 5gj4 D: [324411] Other proteins in same PDB: d5gj4a1, d5gj4c1, d5gj4e1, d5gj4g1 automated match to d3e90d_ complexed with cl |
![]() | Domain d5gj4f_: 5gj4 F: [324428] Other proteins in same PDB: d5gj4a1, d5gj4c1, d5gj4e1, d5gj4g1 automated match to d3e90d_ complexed with cl |
![]() | Domain d5gj4h_: 5gj4 H: [324474] Other proteins in same PDB: d5gj4a1, d5gj4c1, d5gj4e1, d5gj4g1 automated match to d3e90d_ complexed with cl |
![]() | Domain d5h6vb_: 5h6v B: [335407] Other proteins in same PDB: d5h6va_ automated match to d3e90b_ complexed with 7hs |
![]() | Domain d6kk2b_: 6kk2 B: [387727] Other proteins in same PDB: d6kk2a_ automated match to d3e90b_ complexed with d9u |
![]() | Domain d6kk4b_: 6kk4 B: [387746] Other proteins in same PDB: d6kk4a_ automated match to d3e90b_ complexed with de0, gol |
![]() | Domain d6kk5b_: 6kk5 B: [387733] Other proteins in same PDB: d6kk5a_ automated match to d3e90b_ complexed with de6 |
![]() | Domain d6kk6b_: 6kk6 B: [387718] Other proteins in same PDB: d6kk6a_ automated match to d3e90b_ complexed with dv0, gol, so4 |
![]() | Domain d6kpqb_: 6kpq B: [387721] Other proteins in same PDB: d6kpqa_ automated match to d3e90b_ complexed with dt0 |
![]() | Domain d6l50b_: 6l50 B: [389249] Other proteins in same PDB: d6l50a_, d6l50c_, d6l50e_, d6l50g_ automated match to d3e90b_ complexed with e60 |
![]() | Domain d6l50d_: 6l50 D: [389244] Other proteins in same PDB: d6l50a_, d6l50c_, d6l50e_, d6l50g_ automated match to d3e90b_ complexed with e60 |
![]() | Domain d6l50f_: 6l50 F: [389252] Other proteins in same PDB: d6l50a_, d6l50c_, d6l50e_, d6l50g_ automated match to d3e90b_ complexed with e60 |
![]() | Domain d6l50h_: 6l50 H: [389242] Other proteins in same PDB: d6l50a_, d6l50c_, d6l50e_, d6l50g_ automated match to d3e90b_ complexed with e60 |
![]() | Zika virus [TaxId:64320] [327129] (7 PDB entries) |
![]() | Domain d5gpib_: 5gpi B: [327170] Other proteins in same PDB: d5gpia_, d5gpic_, d5gpie_, d5gpig_ automated match to d3e90b_ |
![]() | Domain d5gpid_: 5gpi D: [327131] Other proteins in same PDB: d5gpia_, d5gpic_, d5gpie_, d5gpig_ automated match to d3e90b_ |
![]() | Domain d5gpif_: 5gpi F: [327130] Other proteins in same PDB: d5gpia_, d5gpic_, d5gpie_, d5gpig_ automated match to d3e90b_ |
![]() | Domain d5gpih_: 5gpi H: [327150] Other proteins in same PDB: d5gpia_, d5gpic_, d5gpie_, d5gpig_ automated match to d3e90b_ |
![]() | Domain d5h4ib_: 5h4i B: [327175] Other proteins in same PDB: d5h4ia_ automated match to d3e90b_ complexed with 7hq, act |
![]() | Domain d5yodb_: 5yod B: [348917] Other proteins in same PDB: d5yoda_, d5yodc_, d5yode_, d5yodg_ automated match to d3e90b_ complexed with bez |
![]() | Domain d5yodd_: 5yod D: [348898] Other proteins in same PDB: d5yoda_, d5yodc_, d5yode_, d5yodg_ automated match to d3e90b_ complexed with bez |
![]() | Domain d5yodf_: 5yod F: [348924] Other proteins in same PDB: d5yoda_, d5yodc_, d5yode_, d5yodg_ automated match to d3e90b_ complexed with bez |
![]() | Domain d5yodh_: 5yod H: [348876] Other proteins in same PDB: d5yoda_, d5yodc_, d5yode_, d5yodg_ automated match to d3e90b_ complexed with bez |
![]() | Domain d5yofb_: 5yof B: [348928] Other proteins in same PDB: d5yofa_ automated match to d3e90b_ complexed with 7hs |
![]() | Domain d6kk3b_: 6kk3 B: [387752] Other proteins in same PDB: d6kk3a_ automated match to d5gpih_ complexed with duu |
![]() | Domain d6l4zb_: 6l4z B: [389284] Other proteins in same PDB: d6l4za_, d6l4zc_, d6l4ze_, d6l4zg_ automated match to d5gpih_ complexed with e5x |
![]() | Domain d6l4zd_: 6l4z D: [389238] Other proteins in same PDB: d6l4za_, d6l4zc_, d6l4ze_, d6l4zg_ automated match to d5gpih_ complexed with e5x |
![]() | Domain d6l4zf_: 6l4z F: [389288] Other proteins in same PDB: d6l4za_, d6l4zc_, d6l4ze_, d6l4zg_ automated match to d5gpih_ complexed with e5x |
![]() | Domain d6l4zh_: 6l4z H: [389255] Other proteins in same PDB: d6l4za_, d6l4zc_, d6l4ze_, d6l4zg_ automated match to d5gpih_ complexed with e5x |
![]() | Domain d6y3bb_: 6y3b B: [389104] Other proteins in same PDB: d6y3ba_ automated match to d3e90b_ complexed with gol, o7n, so4 |
Timeline for Protein automated matches from b.47.1.3: Viral proteases: