SCOPe 2.01: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.01
Class a: All alpha proteins [46456] (284 folds)
Fold a.25: Ferritin-like [47239] (6 superfamilies)
core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
Superfamily a.25.2: Cobalamin adenosyltransferase-like [89028] (3 families)
crossover loop goes across a different side of the 4-helical bundle; no internal metal-binding site
Family a.25.2.0: automated matches [191442] (1 protein)
not a true family
Protein automated matches [190652] (3 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [187855] (1 PDB entry)
- Domains for 2idx:
  1. Domain d2idxa_: 2idx A: [165518]
    automated match to d1rtyb_
    complexed with atp, cl, mg, so4
  2. Domain d2idxb_: 2idx B: [165519]
    automated match to d1rtyb_
    complexed with atp, cl, mg, so4
  3. Domain d2idxc_: 2idx C: [165520]
    automated match to d1rtyb_
    complexed with atp, cl, mg, so4
Lactobacillus reuteri [TaxId:1598] [188444] (8 PDB entries)
1. Domains for 2r6t:
  1. Domain d2r6ta_: 2r6t A: [167998]
    automated match to d1rtyb_
    complexed with atp, mg
  2. Domain d2r6tb_: 2r6t B: [167999]
    automated match to d1rtyb_
    complexed with atp, mg
2. Domains for 2r6x:
  1. Domain d2r6xa_: 2r6x A: [168000]
    automated match to d1rtyb_
    complexed with atp, mg
  2. Domain d2r6xb_: 2r6x B: [168001]
    automated match to d1rtyb_
    complexed with atp, mg
3. Domain for 3ci1:
  - Domain d3ci1a_: 3ci1 A: [173245]
    automated match to d1rtyb_
    complexed with atp, b12, k, mg
4. Domain for 3ci3:
  - Domain d3ci3a_: 3ci3 A: [173246]
    automated match to d1rtyb_
    complexed with 3po, 5ad, b12, mg, na
5. Domain for 3ci4:
  - Domain d3ci4a_: 3ci4 A: [173247]
    automated match to d1rtyb_
    complexed with atp, cby, k, mg
6. Domain for 3gah:
  - Domain d3gaha_: 3gah A: [176476]
    automated match to d1rtyb_
    complexed with atp, b12, k, mg
7. Domain for 3gai:
  - Domain d3gaia_: 3gai A: [176477]
    automated match to d1rtyb_
    complexed with atp, b12, cl, gol, k, mg
8. Domain for 3gaj:
  - Domain d3gaja_: 3gaj A: [176478]
    automated match to d1rtyb_
    complexed with atp, b12, k, mg
Mycobacterium tuberculosis [TaxId:1773] [187731] (1 PDB entry)
- Domain for 2g2d:
  - Domain d2g2da_: 2g2d A: [164561]
    automated match to d1rtyb_

More info for Protein automated matches from a.25.2.0: automated matches

Timeline for Protein automated matches from a.25.2.0: automated matches:

Protein automated matches from a.25.2.0: automated matches is new in SCOPe 2.01-stable
Protein automated matches from a.25.2.0: automated matches appears in SCOPe 2.02
Protein automated matches from a.25.2.0: automated matches appears in the current release, SCOPe 2.08