Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1113318Fold b.3: Prealbumin-like [49451] (7 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands to common fold
  4. 1113483Superfamily b.3.4: Transthyretin (synonym: prealbumin) [49472] (2 families) (S)
  5. 1113877Family b.3.4.0: automated matches [191441] (1 protein)
    not a true family
  6. 1113878Protein automated matches [190651] (6 species)
    not a true protein

Species:

  1. 1113879Bacillus subtilis [TaxId:1423] [193190] (1 PDB entry)
  2. 1113881Escherichia coli K-12 [TaxId:83333] [188214] (1 PDB entry)
  3. 1113886Escherichia coli [TaxId:562] [187730] (2 PDB entries)
    1. Domains for 2g2n:
      1. 1113887Domain d2g2na_: 2g2n A: [164564]
        automated match to d1tfpa_
        complexed with so4, zn
      2. 1113888Domain d2g2nb_: 2g2n B: [164565]
        automated match to d1tfpa_
        complexed with so4, zn
      3. 1113889Domain d2g2nc_: 2g2n C: [164566]
        automated match to d1tfpa_
        complexed with so4, zn
      4. 1113890Domain d2g2nd_: 2g2n D: [164567]
        automated match to d1tfpa_
        complexed with so4, zn
    2. Domains for 2g2p:
      1. 1113891Domain d2g2pa_: 2g2p A: [164568]
        automated match to d1tfpa_
        complexed with br, so4, zn
      2. 1113892Domain d2g2pb_: 2g2p B: [164569]
        automated match to d1tfpa_
        complexed with br, so4, zn
      3. 1113893Domain d2g2pc_: 2g2p C: [164570]
        automated match to d1tfpa_
        complexed with br, so4, zn
      4. 1113894Domain d2g2pd_: 2g2p D: [164571]
        automated match to d1tfpa_
        complexed with br, so4, zn
  4. 1113895Klebsiella pneumoniae [TaxId:272620] [196215] (1 PDB entry)
  5. 1113897Salmonella enterica [TaxId:98360] [187762] (1 PDB entry)
  6. 1113900Zebrafish (Danio rerio) [TaxId:7955] [187781] (3 PDB entries)
    1. Domains for 2h1x:
      1. 1113909Domain d2h1xa_: 2h1x A: [164916]
        automated match to d1tfpa_
      2. 1113910Domain d2h1xb_: 2h1x B: [164917]
        automated match to d1tfpa_
      3. 1113911Domain d2h1xc_: 2h1x C: [164918]
        automated match to d1tfpa_
      4. 1113912Domain d2h1xd_: 2h1x D: [164919]
        automated match to d1tfpa_
    2. Domains for 2h6u:
      1. 1113901Domain d2h6ua_: 2h6u A: [164975]
        automated match to d1tfpa_
      2. 1113902Domain d2h6ub_: 2h6u B: [164976]
        automated match to d1tfpa_
      3. 1113903Domain d2h6uc_: 2h6u C: [164977]
        automated match to d1tfpa_
      4. 1113904Domain d2h6ud_: 2h6u D: [164978]
        automated match to d1tfpa_
      5. 1113905Domain d2h6ue_: 2h6u E: [164979]
        automated match to d1tfpa_
      6. 1113906Domain d2h6uf_: 2h6u F: [164980]
        automated match to d1tfpa_
      7. 1113907Domain d2h6ug_: 2h6u G: [164981]
        automated match to d1tfpa_
      8. 1113908Domain d2h6uh_: 2h6u H: [164982]
        automated match to d1tfpa_
    3. Domains for 3q1e:
      1. 1113913Domain d3q1ea_: 3q1e A: [184149]
        automated match to d1tfpa_
        complexed with t44; mutant
      2. 1113914Domain d3q1eb_: 3q1e B: [184150]
        automated match to d1tfpa_
        complexed with t44; mutant
      3. 1113915Domain d3q1ec_: 3q1e C: [184151]
        automated match to d1tfpa_
        complexed with t44; mutant
      4. 1113916Domain d3q1ed_: 3q1e D: [184152]
        automated match to d1tfpa_
        complexed with t44; mutant

More info for Protein automated matches from b.3.4.0: automated matches

Timeline for Protein automated matches from b.3.4.0: automated matches: