Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2167405Fold d.37: CBS-domain pair [54630] (1 superfamily)
    duplication: tandem repeat of two beta-X-beta-alpha-beta(2)-alpha motifs of similar sequences; 4 layers: a/b/b/a
  4. 2167406Superfamily d.37.1: CBS-domain pair [54631] (2 families) (S)
  5. 2167407Family d.37.1.1: CBS-domain pair [54632] (21 protein domains)
    Pfam PF00571; pairs of CBS domains dimerize to form a stable globular domain, a.k.a. Bateman domain
  6. 2167533Protein automated matches [190627] (7 species)
    not a true protein

Species:

  1. 2167534Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [231218] (4 PDB entries)
    1. Domains for 2qr1:
      1. 2167539Domain d2qr1e1: 2qr1 E:3-181 [231219]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_, d2qr1g3
        automated match to d2ooxe1
        complexed with adp
      2. 2167540Domain d2qr1e2: 2qr1 E:182-334 [231226]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_, d2qr1g3
        automated match to d2ooxe2
        complexed with adp
      3. 2167541Domain d2qr1g1: 2qr1 G:3-181 [231220]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_, d2qr1g3
        automated match to d2ooxe1
        complexed with adp
      4. 2167542Domain d2qr1g2: 2qr1 G:182-334 [231225]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_, d2qr1g3
        automated match to d2ooxe2
        complexed with adp
    2. Domains for 2qrc:
      1. 2167543Domain d2qrce1: 2qrc E:3-181 [231221]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_, d2qrcg3
        automated match to d2ooxe1
        complexed with adp, amp
      2. 2167544Domain d2qrce2: 2qrc E:182-334 [231228]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_, d2qrcg3
        automated match to d2ooxe2
        complexed with adp, amp
      3. 2167545Domain d2qrcg1: 2qrc G:3-181 [231222]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_, d2qrcg3
        automated match to d2ooxe1
        complexed with adp, amp
      4. 2167546Domain d2qrcg2: 2qrc G:182-334 [231229]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_, d2qrcg3
        automated match to d2ooxe2
        complexed with adp, amp
    3. Domains for 2qrd:
      1. 2167535Domain d2qrde1: 2qrd E:3-181 [231224]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_, d2qrde3, d2qrdg3
        automated match to d2ooxe1
        complexed with adp, atp
      2. 2167536Domain d2qrde2: 2qrd E:182-334 [231230]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_, d2qrde3, d2qrdg3
        automated match to d2ooxe2
        complexed with adp, atp
      3. 2167537Domain d2qrdg1: 2qrd G:3-181 [231223]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_, d2qrde3, d2qrdg3
        automated match to d2ooxe1
        complexed with adp, atp
      4. 2167538Domain d2qrdg2: 2qrd G:182-334 [231227]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_, d2qrde3, d2qrdg3
        automated match to d2ooxe2
        complexed with adp, atp
    4. Domains for 2qre:
      1. 2167547Domain d2qree1: 2qre E:3-181 [238834]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_, d2qree3, d2qreg3
        automated match to d2ooxe1
        complexed with amz
      2. 2167548Domain d2qree2: 2qre E:182-316 [238835]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_, d2qree3, d2qreg3
        automated match to d2ooxe2
        complexed with amz
      3. 2167549Domain d2qreg1: 2qre G:3-181 [238836]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_, d2qree3, d2qreg3
        automated match to d2ooxe1
        complexed with amz
      4. 2167550Domain d2qreg2: 2qre G:182-316 [238837]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_, d2qree3, d2qreg3
        automated match to d2ooxe2
        complexed with amz
  2. 2167551Geobacillus kaustophilus [TaxId:235909] [188209] (1 PDB entry)
  3. 2167554Human (Homo sapiens) [TaxId:9606] [187902] (3 PDB entries)
    1. Domains for 2j9l:
      1. 2167555Domain d2j9lb1: 2j9l B:578-746 [161469]
        Other proteins in same PDB: d2j9la1, d2j9la2, d2j9lb2, d2j9lc2, d2j9ld2, d2j9le2, d2j9lf2
        automated match to d2j9la1
        complexed with atp, cl
      2. 2167556Domain d2j9lc1: 2j9l C:578-746 [161470]
        Other proteins in same PDB: d2j9la1, d2j9la2, d2j9lb2, d2j9lc2, d2j9ld2, d2j9le2, d2j9lf2
        automated match to d2j9la1
        complexed with atp, cl
      3. 2167557Domain d2j9ld1: 2j9l D:578-746 [161471]
        Other proteins in same PDB: d2j9la1, d2j9la2, d2j9lb2, d2j9lc2, d2j9ld2, d2j9le2, d2j9lf2
        automated match to d2j9la1
        complexed with atp, cl
      4. 2167558Domain d2j9le1: 2j9l E:578-746 [161472]
        Other proteins in same PDB: d2j9la1, d2j9la2, d2j9lb2, d2j9lc2, d2j9ld2, d2j9le2, d2j9lf2
        automated match to d2j9la1
        complexed with atp, cl
      5. 2167559Domain d2j9lf1: 2j9l F:578-746 [161473]
        Other proteins in same PDB: d2j9la1, d2j9la2, d2j9lb2, d2j9lc2, d2j9ld2, d2j9le2, d2j9lf2
        automated match to d2j9la1
        complexed with atp, cl
    2. Domains for 2ja3:
      1. 2167564Domain d2ja3a1: 2ja3 A:578-746 [242201]
        Other proteins in same PDB: d2ja3a2, d2ja3b2, d2ja3c2, d2ja3d2, d2ja3e2, d2ja3f2
        automated match to d2j9lc_
        complexed with adp
      2. 2167565Domain d2ja3b1: 2ja3 B:578-746 [242202]
        Other proteins in same PDB: d2ja3a2, d2ja3b2, d2ja3c2, d2ja3d2, d2ja3e2, d2ja3f2
        automated match to d2j9lc_
        complexed with adp
      3. 2167566Domain d2ja3c1: 2ja3 C:578-746 [242203]
        Other proteins in same PDB: d2ja3a2, d2ja3b2, d2ja3c2, d2ja3d2, d2ja3e2, d2ja3f2
        automated match to d2j9lc_
        complexed with adp
      4. 2167567Domain d2ja3d1: 2ja3 D:578-746 [242204]
        Other proteins in same PDB: d2ja3a2, d2ja3b2, d2ja3c2, d2ja3d2, d2ja3e2, d2ja3f2
        automated match to d2j9lc_
        complexed with adp
      5. 2167568Domain d2ja3e1: 2ja3 E:578-746 [242205]
        Other proteins in same PDB: d2ja3a2, d2ja3b2, d2ja3c2, d2ja3d2, d2ja3e2, d2ja3f2
        automated match to d2j9lc_
        complexed with adp
      6. 2167569Domain d2ja3f1: 2ja3 F:578-746 [242206]
        Other proteins in same PDB: d2ja3a2, d2ja3b2, d2ja3c2, d2ja3d2, d2ja3e2, d2ja3f2
        automated match to d2j9lc_
        complexed with adp
    3. Domains for 4cfe:
      1. 2167560Domain d4cfee1: 4cfe E:27-182 [251370]
        automated match to d2v8qe2
        complexed with 992, amp, stu
      2. 2167561Domain d4cfee2: 4cfe E:183-325 [251371]
        automated match to d2v8qe1
        complexed with 992, amp, stu
      3. 2167562Domain d4cfef1: 4cfe F:27-182 [251372]
        automated match to d2v8qe2
        complexed with 992, amp, stu
      4. 2167563Domain d4cfef2: 4cfe F:183-325 [251373]
        automated match to d2v8qe1
        complexed with 992, amp, stu
  4. 2167570Pyrococcus horikoshii [TaxId:53953] [188263] (1 PDB entry)
  5. 2167572Sulfolobus tokodaii [TaxId:273063] [187663] (1 PDB entry)
  6. 2167574Thermus thermophilus HB8 [TaxId:300852] [231686] (1 PDB entry)
  7. 2294762Thermus thermophilus [TaxId:300852] [338063] (1 PDB entry)

More info for Protein automated matches from d.37.1.1: CBS-domain pair

Timeline for Protein automated matches from d.37.1.1: CBS-domain pair: