Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1267072Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 1267073Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. 1267143Family a.29.2.0: automated matches [191428] (1 protein)
    not a true family
  6. 1267144Protein automated matches [190615] (4 species)
    not a true protein

Species:

  1. 1267145Cryptosporidium parvum [TaxId:353152] [224846] (1 PDB entry)
  2. 1267148Human (Homo sapiens) [TaxId:9606] [187641] (145 PDB entries)
    1. Domains for 1x0j:
      1. 1267254Domain d1x0ja_: 1x0j A: [162015]
        automated match to d1jm4b_
        complexed with dtt, mes
      2. 1267255Domain d1x0jb_: 1x0j B: [162016]
        automated match to d1jm4b_
        complexed with dtt, mes
      3. 1267256Domain d1x0jc_: 1x0j C: [162017]
        automated match to d1jm4b_
        complexed with dtt, mes
    2. Domains for 2dvq:
      1. 1267328Domain d2dvqa_: 2dvq A: [163719]
        automated match to d1jm4b_
      2. 1267329Domain d2dvqb_: 2dvq B: [163720]
        automated match to d1jm4b_
      3. 1267330Domain d2dvqc_: 2dvq C: [163721]
        automated match to d1jm4b_
    3. Domains for 2dvr:
      1. 1267340Domain d2dvra_: 2dvr A: [163722]
        automated match to d1jm4b_
      2. 1267341Domain d2dvrb_: 2dvr B: [163723]
        automated match to d1jm4b_
      3. 1267342Domain d2dvrc_: 2dvr C: [163724]
        automated match to d1jm4b_
    4. Domains for 2dvs:
      1. 1267322Domain d2dvsa_: 2dvs A: [163725]
        automated match to d1jm4b_
      2. 1267323Domain d2dvsb_: 2dvs B: [163726]
        automated match to d1jm4b_
      3. 1267324Domain d2dvsc_: 2dvs C: [163727]
        automated match to d1jm4b_
    5. Domain for 2dvv:
    6. Domain for 2grc:
    7. Domains for 2nxb:
      1. 1267160Domain d2nxba_: 2nxb A: [166409]
        automated match to d1jm4b_
        complexed with edo, na
      2. 1267161Domain d2nxbb_: 2nxb B: [166410]
        automated match to d1jm4b_
        complexed with edo, na
    8. Domains for 2oo1:
      1. 1267215Domain d2oo1a_: 2oo1 A: [205343]
        automated match to d3jvma_
        complexed with 7pe, edo, na
      2. 1267216Domain d2oo1b_: 2oo1 B: [205344]
        automated match to d3jvma_
        complexed with 7pe, edo, na
      3. 1267217Domain d2oo1c_: 2oo1 C: [205345]
        automated match to d3jvma_
        complexed with 7pe, edo, na
      4. 1267218Domain d2oo1d_: 2oo1 D: [205346]
        automated match to d3jvma_
        complexed with 7pe, edo, na
    9. Domain for 2oss:
    10. Domain for 2ouo:
    11. Domains for 2rfj:
      1. 1267317Domain d2rfja1: 2rfj A:27-135 [168085]
        automated match to d1jm4b_
      2. 1267318Domain d2rfjb1: 2rfj B:29-135 [168086]
        automated match to d1jm4b_
      3. 1267319Domain d2rfjc_: 2rfj C: [168087]
        automated match to d1jm4b_
    12. Domains for 2ydw:
      1. 1267289Domain d2ydwa_: 2ydw A: [207558]
        automated match to d3zyub_
        complexed with so4, wsh
      2. 1267290Domain d2ydwb_: 2ydw B: [207559]
        automated match to d3zyub_
        complexed with so4, wsh
      3. 1267291Domain d2ydwc_: 2ydw C: [207560]
        automated match to d3zyub_
        complexed with so4, wsh
    13. Domains for 2yek:
      1. 1267266Domain d2yeka_: 2yek A: [207561]
        automated match to d3zyub_
        complexed with eam, so4
      2. 1267267Domain d2yekb_: 2yek B: [207562]
        automated match to d3zyub_
        complexed with eam, so4
      3. 1267268Domain d2yekc_: 2yek C: [207563]
        automated match to d3zyub_
        complexed with eam, so4
    14. Domain for 2yel:
    15. Domains for 2yem:
      1. 1267333Domain d2yema_: 2yem A: [197054]
        automated match to d2nxbb_
        complexed with wsh
      2. 1267334Domain d2yemb_: 2yem B: [198713]
        automated match to d2yema_
        complexed with wsh
    16. Domains for 2yyn:
      1. 1267370Domain d2yyna_: 2yyn A: [231675]
        automated match to d3uv2a_
      2. 1267371Domain d2yynb_: 2yyn B: [231674]
        automated match to d3uv2a_
      3. 1267372Domain d2yync_: 2yyn C: [231676]
        automated match to d3uv2a_
      4. 1267373Domain d2yynd_: 2yyn D: [231677]
        automated match to d3uv2a_
    17. Domains for 3aqa:
      1. 1267344Domain d3aqaa_: 3aqa A: [172302]
        automated match to d1jm4b_
        complexed with byh, mes
      2. 1267345Domain d3aqab_: 3aqa B: [172303]
        automated match to d1jm4b_
        complexed with byh, mes
      3. 1267346Domain d3aqac_: 3aqa C: [172304]
        automated match to d1jm4b_
        complexed with byh, mes
    18. Domain for 3dai:
    19. Domains for 3g0j:
      1. 1267257Domain d3g0ja_: 3g0j A: [210293]
        automated match to d2grca_
        complexed with edo, no3
      2. 1267258Domain d3g0jb_: 3g0j B: [210294]
        automated match to d2grca_
        complexed with edo, no3
    20. Domain for 3g0l:
    21. Domains for 3hme:
      1. 1267338Domain d3hmea_: 3hme A: [232486]
        automated match to d4nqna_
      2. 1267339Domain d3hmeb_: 3hme B: [232487]
        automated match to d4nqna_
    22. Domain for 3hmf:
    23. Domain for 3iu5:
    24. Domains for 3k2j:
      1. 1267365Domain d3k2ja_: 3k2j A: [212155]
        automated match to d3gg3a_
        complexed with cl, so4
      2. 1267366Domain d3k2jb_: 3k2j B: [212156]
        automated match to d3gg3a_
        complexed with cl, so4
    25. Domains for 3ljw:
      1. 1267173Domain d3ljwa_: 3ljw A: [199731]
        automated match to d3ljwb_
        complexed with act, na
      2. 1267174Domain d3ljwb_: 3ljw B: [196449]
        automated match to d3uvda_
        complexed with act, na
    26. Domains for 3lxj:
      1. 1267360Domain d3lxja_: 3lxj A: [232859]
        automated match to d3daia_
        complexed with ipa
      2. 1267361Domain d3lxjb_: 3lxj B: [232860]
        automated match to d3daia_
        complexed with ipa
      3. 1267362Domain d3lxjc_: 3lxj C: [232858]
        automated match to d3daia_
        complexed with ipa
      4. 1267363Domain d3lxjd_: 3lxj D: [232861]
        automated match to d3daia_
        complexed with ipa
    27. Domain for 3mb3:
    28. Domains for 3mb4:
      1. 1267219Domain d3mb4a_: 3mb4 A: [213173]
        automated match to d2grca_
        complexed with cl, edo, mb3
      2. 1267220Domain d3mb4b_: 3mb4 B: [213174]
        automated match to d2grca_
        complexed with cl, edo, mb3
    29. Domains for 3mqm:
      1. 1267367Domain d3mqma_: 3mqm A: [232948]
        automated match to d3ljwb_
      2. 1267368Domain d3mqmb_: 3mqm B: [232949]
        automated match to d3ljwb_
    30. Domain for 3mxf:
    31. Domains for 3nxb:
      1. 1267249Domain d3nxba_: 3nxb A: [182608]
        automated match to d1f68a_
        complexed with edo
      2. 1267250Domain d3nxbb_: 3nxb B: [182609]
        automated match to d1f68a_
        complexed with edo
    32. Domain for 3oni:
    33. Domain for 3p5o:
    34. Domain for 3q2e:
    35. Domain for 3q2f:
    36. Domain for 3qzs:
    37. Domain for 3qzt:
    38. Domains for 3rcw:
      1. 1267347Domain d3rcwa_: 3rcw A: [215723]
        automated match to d3uvda_
        complexed with act, edo, mb3
      2. 1267348Domain d3rcwb_: 3rcw B: [215724]
        automated match to d3uvda_
        complexed with act, edo, mb3
      3. 1267349Domain d3rcwc_: 3rcw C: [215725]
        automated match to d3uvda_
        complexed with act, edo, mb3
      4. 1267350Domain d3rcwd_: 3rcw D: [215726]
        automated match to d3uvda_
        complexed with act, edo, mb3
      5. 1267351Domain d3rcwe_: 3rcw E: [215727]
        automated match to d3uvda_
        complexed with act, edo, mb3
      6. 1267352Domain d3rcwf_: 3rcw F: [215728]
        automated match to d3uvda_
        complexed with act, edo, mb3
      7. 1267353Domain d3rcwg_: 3rcw G: [215729]
        automated match to d3uvda_
        complexed with act, edo, mb3
      8. 1267354Domain d3rcwh_: 3rcw H: [215730]
        automated match to d3uvda_
        complexed with act, edo, mb3
    39. Domain for 3s91:
    40. Domain for 3s92:
    41. Domain for 3svf:
    42. Domain for 3svg:
    43. Domain for 3u5j:
    44. Domains for 3u5k:
      1. 1267279Domain d3u5ka_: 3u5k A: [186083]
        automated match to d1jm4b_
        complexed with 08j
      2. 1267280Domain d3u5kb_: 3u5k B: [186084]
        automated match to d1jm4b_
        complexed with 08j
      3. 1267281Domain d3u5kc_: 3u5k C: [186085]
        automated match to d1jm4b_
        complexed with 08j
      4. 1267282Domain d3u5kd_: 3u5k D: [186086]
        automated match to d1jm4b_
        complexed with 08j
    45. Domain for 3u5l:
    46. Domain for 3uv2:
    47. Domain for 3uv5:
    48. Domain for 3uvd:
    49. Domain for 3uvw:
    50. Domain for 3uvx:
    51. Domain for 3uvy:
    52. Domains for 3zyu:
      1. 1267170Domain d3zyua_: 3zyu A: [186663]
        automated match to d1jm4b_
        complexed with 1gh, edo
      2. 1267171Domain d3zyub_: 3zyu B: [186664]
        automated match to d1jm4b_
        complexed with 1gh, edo
    53. Domains for 4a9e:
      1. 1267261Domain d4a9ea_: 4a9e A: [218720]
        automated match to d3zyub_
        complexed with 3pf, edo, so4
      2. 1267262Domain d4a9eb_: 4a9e B: [218721]
        automated match to d3zyub_
        complexed with 3pf, edo, so4
      3. 1267263Domain d4a9ec_: 4a9e C: [218722]
        automated match to d3zyub_
        complexed with 3pf, edo, so4
    54. Domains for 4a9f:
      1. 1267221Domain d4a9fa_: 4a9f A: [218723]
        automated match to d3zyub_
        complexed with edo, mb3, so4
      2. 1267222Domain d4a9fb_: 4a9f B: [218724]
        automated match to d3zyub_
        complexed with edo, mb3, so4
      3. 1267223Domain d4a9fc_: 4a9f C: [218725]
        automated match to d3zyub_
        complexed with edo, mb3, so4
    55. Domains for 4a9h:
      1. 1267285Domain d4a9ha_: 4a9h A: [218726]
        automated match to d3zyub_
        complexed with edo, so4, tvp
      2. 1267286Domain d4a9hb_: 4a9h B: [218727]
        automated match to d3zyub_
        complexed with edo, so4, tvp
      3. 1267287Domain d4a9hc_: 4a9h C: [218728]
        automated match to d3zyub_
        complexed with edo, so4, tvp
    56. Domains for 4a9i:
      1. 1267335Domain d4a9ia_: 4a9i A: [218729]
        automated match to d3zyub_
        complexed with edo, p9i, so4
      2. 1267336Domain d4a9ib_: 4a9i B: [218730]
        automated match to d3zyub_
        complexed with edo, p9i, so4
      3. 1267337Domain d4a9ic_: 4a9i C: [218731]
        automated match to d3zyub_
        complexed with edo, p9i, so4
    57. Domains for 4a9j:
      1. 1267274Domain d4a9ja_: 4a9j A: [218732]
        automated match to d3zyub_
        complexed with edo, so4, tyl
      2. 1267275Domain d4a9jb_: 4a9j B: [218733]
        automated match to d3zyub_
        complexed with edo, so4, tyl
      3. 1267276Domain d4a9jc_: 4a9j C: [218734]
        automated match to d3zyub_
        complexed with edo, so4, tyl
    58. Domain for 4a9l:
    59. Domains for 4a9m:
      1. 1267305Domain d4a9ma_: 4a9m A: [218735]
        automated match to d3zyub_
        complexed with p9m, so4
      2. 1267306Domain d4a9mb_: 4a9m B: [218736]
        automated match to d3zyub_
        complexed with p9m, so4
      3. 1267307Domain d4a9mc_: 4a9m C: [218737]
        automated match to d3zyub_
        complexed with p9m, so4
    60. Domains for 4a9n:
      1. 1267251Domain d4a9na_: 4a9n A: [218738]
        automated match to d3zyub_
        complexed with a9n, dms, edo, so4
      2. 1267252Domain d4a9nb_: 4a9n B: [218739]
        automated match to d3zyub_
        complexed with a9n, dms, edo, so4
      3. 1267253Domain d4a9nc_: 4a9n C: [218740]
        automated match to d3zyub_
        complexed with a9n, dms, edo, so4
    61. Domains for 4a9o:
      1. 1267228Domain d4a9oa_: 4a9o A: [218741]
        automated match to d3zyub_
        complexed with a9o, edo, so4
      2. 1267229Domain d4a9ob_: 4a9o B: [218742]
        automated match to d3zyub_
        complexed with a9o, edo, so4
      3. 1267230Domain d4a9oc_: 4a9o C: [218743]
        automated match to d3zyub_
        complexed with a9o, edo, so4
    62. Domains for 4akn:
      1. 1267233Domain d4akna_: 4akn A: [219012]
        automated match to d3zyub_
        complexed with dms, edo, s5b, so4
      2. 1267234Domain d4aknb_: 4akn B: [219013]
        automated match to d3zyub_
        complexed with dms, edo, s5b, so4
      3. 1267235Domain d4aknc_: 4akn C: [219014]
        automated match to d3zyub_
        complexed with dms, edo, s5b, so4
    63. Domain for 4alg:
    64. Domains for 4alh:
      1. 1267271Domain d4alha_: 4alh A: [219029]
        automated match to d3zyub_
        complexed with a9p, edo, so4
      2. 1267272Domain d4alhb_: 4alh B: [219030]
        automated match to d3zyub_
        complexed with a9p, edo, so4
      3. 1267273Domain d4alhc_: 4alh C: [219031]
        automated match to d3zyub_
        complexed with a9p, edo, so4
    65. Domain for 4bw1:
    66. Domain for 4bw2:
    67. Domain for 4bw3:
    68. Domain for 4bw4:
    69. Domain for 4c67:
    70. Domain for 4cfk:
    71. Domain for 4cfl:
    72. Domain for 4cup:
    73. Domain for 4cuq:
    74. Domain for 4cur:
    75. Domain for 4cus:
    76. Domain for 4cut:
    77. Domain for 4e96:
    78. Domain for 4f3i:
    79. Domains for 4flp:
      1. 1267357Domain d4flpa_: 4flp A: [202045]
        automated match to d2rfja1
        complexed with jq1, k
      2. 1267358Domain d4flpb_: 4flp B: [194983]
        automated match to d2rfja1
        complexed with jq1, k
    80. Domain for 4gpj:
    81. Domain for 4hbv:
    82. Domain for 4hbw:
    83. Domain for 4hbx:
    84. Domain for 4hby:
    85. Domain for 4hxk:
    86. Domain for 4hxl:
    87. Domain for 4hxm:
    88. Domain for 4hxn:
    89. Domain for 4hxo:
    90. Domain for 4hxp:
    91. Domain for 4hxr:
    92. Domain for 4hxs:
    93. Domain for 4ioo:
    94. Domain for 4ioq:
    95. Domain for 4ior:
    96. Domain for 4ir3:
    97. Domain for 4ir4:
    98. Domain for 4ir5:
    99. Domain for 4ir6:
    100. Domain for 4j0r:
    101. Domain for 4j0s:
    102. Domain for 4j1p:
    103. Domain for 4j3i:
    104. Domains for 4kcx:
      1. 1267331Domain d4kcxa_: 4kcx A: [230069]
        automated match to d4kcxb_
        complexed with 1qk, cl
      2. 1267332Domain d4kcxb_: 4kcx B: [227962]
        automated match to d4a9ib_
        complexed with 1qk, cl
    105. Domain for 4lc2:
    106. Domain for 4lr6:
    107. Domain for 4lrg:
    108. Domain for 4lyi:
    109. Domain for 4lz2:
    110. Domain for 4lzs:
    111. Domain for 4men:
    112. Domain for 4meo:
    113. Domain for 4mep:
    114. Domain for 4meq:
    115. Domain for 4mr3:
    116. Domain for 4mr4:
    117. Domain for 4mr5:
    118. Domain for 4mr6:
    119. Domain for 4nqm:
    120. Domain for 4nqn:
    121. Domain for 4nr8:
    122. Domain for 4nr9:
    123. Domain for 4nra:
    124. Domain for 4nrb:
    125. Domain for 4nrc:
    126. Domain for 4nuc:
    127. Domain for 4nud:
    128. Domain for 4nue:
    129. Domains for 4o70:
      1. 1267237Domain d4o70a_: 4o70 A: [237382]
        automated match to d3p5oa_
        complexed with 1qk, edo
      2. 1267238Domain d4o70b_: 4o70 B: [237380]
        automated match to d3p5oa_
        complexed with 1qk, edo
    130. Domains for 4o71:
      1. 1267165Domain d4o71a_: 4o71 A: [237387]
        automated match to d3p5oa_
        complexed with cpb, edo
      2. 1267166Domain d4o71b_: 4o71 B: [237386]
        automated match to d3p5oa_
        complexed with cpb, edo
    131. Domain for 4o72:
    132. Domains for 4o73:
      1. 1267184Domain d4o73a_: 4o73 A: [237383]
        automated match to d3p5oa_
        complexed with 2r5, edo, so4
      2. 1267185Domain d4o73b_: 4o73 B: [237381]
        automated match to d3p5oa_
        complexed with 2r5, edo, so4
    133. Domains for 4o74:
      1. 1267192Domain d4o74a_: 4o74 A: [237379]
        automated match to d3p5oa_
        complexed with edo, peg, r78
      2. 1267193Domain d4o74b_: 4o74 B: [237366]
        automated match to d3p5oa_
        complexed with edo, peg, r78
    134. Domain for 4o75:
    135. Domains for 4o76:
      1. 1267245Domain d4o76a_: 4o76 A: [237378]
        automated match to d3p5oa_
        complexed with 1m3, edo
      2. 1267246Domain d4o76b_: 4o76 B: [237372]
        automated match to d3p5oa_
        complexed with 1m3, edo
      3. 1267247Domain d4o76c_: 4o76 C: [237370]
        automated match to d3p5oa_
        complexed with 1m3, edo
      4. 1267248Domain d4o76d_: 4o76 D: [237377]
        automated match to d3p5oa_
        complexed with 1m3, edo
    136. Domains for 4o77:
      1. 1267326Domain d4o77a_: 4o77 A: [237367]
        automated match to d3p5oa_
        complexed with 2re
      2. 1267327Domain d4o77b_: 4o77 B: [237375]
        automated match to d3p5oa_
        complexed with 2re
    137. Domain for 4o78:
    138. Domain for 4o7a:
    139. Domain for 4o7b:
    140. Domain for 4o7c:
    141. Domains for 4o7e:
      1. 1267300Domain d4o7ea_: 4o7e A: [237389]
        automated match to d3p5oa_
        complexed with 2rn, edo
      2. 1267301Domain d4o7eb_: 4o7e B: [237388]
        automated match to d3p5oa_
        complexed with 2rn, edo
    142. Domains for 4o7f:
      1. 1267277Domain d4o7fa_: 4o7f A: [237392]
        automated match to d3p5oa_
        complexed with 2rq, cl, edo
      2. 1267278Domain d4o7fb_: 4o7f B: [237393]
        automated match to d3p5oa_
        complexed with 2rq, cl, edo
    143. Domains for 4ogi:
      1. 1267293Domain d4ogia_: 4ogi A: [237210]
        automated match to d3p5oa_
        complexed with edo, r78
      2. 1267294Domain d4ogib_: 4ogi B: [237213]
        automated match to d3p5oa_
        complexed with edo, r78
    144. Domains for 4ogj:
      1. 1267242Domain d4ogja_: 4ogj A: [237212]
        automated match to d3p5oa_
        complexed with 2ta, edo
      2. 1267243Domain d4ogjb_: 4ogj B: [237211]
        automated match to d3p5oa_
        complexed with 2ta, edo
    145. Domains for 4ps5:
      1. 1267186Domain d4ps5a_: 4ps5 A: [237887]
        automated match to d3p5oa_
        complexed with 2ta, act, edo
      2. 1267187Domain d4ps5b_: 4ps5 B: [237888]
        automated match to d3p5oa_
        complexed with 2ta, act, edo
  3. 1267374Mouse (Mus musculus) [TaxId:10090] [196526] (4 PDB entries)
    1. Domain for 2dww:
    2. Domain for 3jvj:
    3. Domain for 3jvl:
    4. Domain for 3jvm:
  4. 1267379Plasmodium falciparum [TaxId:36329] [237857] (1 PDB entry)

More info for Protein automated matches from a.29.2.0: automated matches

Timeline for Protein automated matches from a.29.2.0: automated matches: