Species:

1. Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [226572] (3 PDB entries)

   1. Domains for 3kz2:

      1. Domain d3kz2a_: 3kz2 A: [305751] automated match to d4iqea_

      2. Domain d3kz2b_: 3kz2 B: [305752] automated match to d4iqea_

   2. Domains for 4iqd:

      1. Domain d4iqda_: 4iqd A: [223308] automated match to d3eoob_ complexed with pyr

      2. Domain d4iqdb_: 4iqd B: [223309] automated match to d3eoob_ complexed with pyr

   3. Domains for 4iqe:

      1. Domain d4iqea_: 4iqe A: [223310] automated match to d3eoob_

      2. Domain d4iqeb_: 4iqe B: [223311] automated match to d3eoob_

2. Aspergillus niger [TaxId:5061] [255825] (2 PDB entries)

   1. Domains for 3fa3:

      1. Domain d3fa3a_: 3fa3 A: [246044] automated match to d3m0ja_ complexed with gol, mn, oaf

      2. Domain d3fa3b_: 3fa3 B: [246045] automated match to d3m0ja_ complexed with gol, mn, oaf

      3. Domain d3fa3c_: 3fa3 C: [246046] automated match to d3m0ja_ complexed with gol, mn, oaf

      4. Domain d3fa3d_: 3fa3 D: [246047] automated match to d3m0ja_ complexed with gol, mn, oaf

      5. Domain d3fa3e_: 3fa3 E: [246048] automated match to d3m0ja_ complexed with gol, mn, oaf

      6. Domain d3fa3f_: 3fa3 F: [246049] automated match to d3m0ja_ complexed with gol, mn, oaf

      7. Domain d3fa3g_: 3fa3 G: [246050] automated match to d3m0ja_ complexed with gol, mn, oaf

      8. Domain d3fa3h_: 3fa3 H: [246051] automated match to d3m0ja_ complexed with gol, mn, oaf

      9. Domain d3fa3i_: 3fa3 I: [246052] automated match to d3m0ja_ complexed with gol, mn, oaf

      10. Domain d3fa3j_: 3fa3 J: [246053] automated match to d3m0ja_ complexed with gol, mn, oaf

      11. Domain d3fa3k_: 3fa3 K: [246054] automated match to d3m0ja_ complexed with gol, mn, oaf

      12. Domain d3fa3l_: 3fa3 L: [246055] automated match to d3m0ja_ complexed with gol, mn, oaf

      13. Domain d3fa3m_: 3fa3 M: [246056] automated match to d3m0ja_ complexed with gol, mn, oaf

      14. Domain d3fa3n_: 3fa3 N: [246057] automated match to d3m0ja_ complexed with gol, mn, oaf

      15. Domain d3fa3o_: 3fa3 O: [246058] automated match to d3m0ja_ complexed with gol, mn, oaf

      16. Domain d3fa3p_: 3fa3 P: [246059] automated match to d3m0ja_ complexed with gol, mn, oaf

   2. Domains for 3fa4:

      1. Domain d3fa4a_: 3fa4 A: [246060] automated match to d3m0ja_ complexed with mg

      2. Domain d3fa4b_: 3fa4 B: [246061] automated match to d3m0ja_ complexed with mg

      3. Domain d3fa4c_: 3fa4 C: [246062] automated match to d3m0ja_ complexed with mg

      4. Domain d3fa4d_: 3fa4 D: [246063] automated match to d3m0ja_ complexed with mg

      5. Domain d3fa4e_: 3fa4 E: [246064] automated match to d3m0ja_ complexed with mg

      6. Domain d3fa4f_: 3fa4 F: [246065] automated match to d3m0ja_ complexed with mg

      7. Domain d3fa4g_: 3fa4 G: [246066] automated match to d3m0ja_ complexed with mg

      8. Domain d3fa4h_: 3fa4 H: [246067] automated match to d3m0ja_ complexed with mg

      9. Domain d3fa4i_: 3fa4 I: [246068] automated match to d3m0ja_ complexed with mg

      10. Domain d3fa4j_: 3fa4 J: [246069] automated match to d3m0ja_ complexed with mg

      11. Domain d3fa4k_: 3fa4 K: [246070] automated match to d3m0ja_ complexed with mg

      12. Domain d3fa4l_: 3fa4 L: [246071] automated match to d3m0ja_ complexed with mg

3. Bacillus anthracis [TaxId:261594] [311297] (1 PDB entry)

   • Domains for 3ih1:

     1. Domain d3ih1a_: 3ih1 A: [305553] automated match to d4iqea_ complexed with pyr

     2. Domain d3ih1b_: 3ih1 B: [305554] automated match to d4iqea_ complexed with pyr

4. Burkholderia cenocepacia [TaxId:216591] [227802] (1 PDB entry)

   • Domains for 4mf4:

     1. Domain d4mf4a_: 4mf4 A: [235605] automated match to d4mf4f_ complexed with edo

     2. Domain d4mf4b_: 4mf4 B: [235606] automated match to d4mf4f_ complexed with edo

     3. Domain d4mf4c_: 4mf4 C: [235607] automated match to d4mf4f_ complexed with edo

     4. Domain d4mf4d_: 4mf4 D: [235608] automated match to d4mf4f_ complexed with edo

     5. Domain d4mf4e_: 4mf4 E: [227804] automated match to d3qz6a_ complexed with edo

     6. Domain d4mf4f_: 4mf4 F: [227803] automated match to d3qz6a_ complexed with edo

5. Clove pink (Dianthus caryophyllus) [TaxId:3570] [255010] (1 PDB entry)

   • Domains for 1zlp:

     1. Domain d1zlpa_: 1zlp A: [241143] automated match to d1pymb_ complexed with gaq, mg

     2. Domain d1zlpb_: 1zlp B: [241144] automated match to d1pymb_ complexed with gaq, mg

6. Cryphonectria parasitica [TaxId:5116] [232864] (3 PDB entries)

   1. Domain for 3lye:

      • Domain d3lyea_: 3lye A: [232865] automated match to d4iqda_ complexed with ca

   2. Domain for 3m0j:

      • Domain d3m0ja_: 3m0j A: [232868] automated match to d4iqda_ complexed with ca, mn, oaf

   3. Domain for 3m0k:

      • Domain d3m0ka_: 3m0k A: [232869] automated match to d4iqda_ complexed with ca, mn, oxl

7. Desulfitobacterium hafniense [TaxId:272564] [189673] (1 PDB entry)

   • Domain for 3qz6:

     • Domain d3qz6a1: 3qz6 A:1-258 [184716] Other proteins in same PDB: d3qz6a2 automated match to d1dxea_ complexed with zn

8. Escherichia coli K-12 [TaxId:83333] [188593] (2 PDB entries)

   1. Domains for 2vws:

      1. Domain d2vwsa_: 2vws A: [168886] automated match to d1dxea_ complexed with gol, po4

      2. Domain d2vwsb_: 2vws B: [168887] automated match to d1dxea_ complexed with gol, po4

      3. Domain d2vwsc_: 2vws C: [168888] automated match to d1dxea_ complexed with gol, po4

   2. Domains for 2vwt:

      1. Domain d2vwta_: 2vwt A: [168889] automated match to d1dxea_ complexed with gol, mg, po4, pyr

      2. Domain d2vwtb_: 2vwt B: [168890] automated match to d1dxea_ complexed with gol, mg, po4, pyr

      3. Domain d2vwtc_: 2vwt C: [168891] automated match to d1dxea_ complexed with gol, mg, po4, pyr

9. Flaveria pringlei [TaxId:4226] [332632] (1 PDB entry)

   • Domain for 5jvn:

     • Domain d5jvna3: 5jvn A:514-874 [332633] Other proteins in same PDB: d5jvna1, d5jvna2, d5jvna4 automated match to d2x0sa1 complexed with 6nq, mg, pep

10. Flaveria trinervia [TaxId:4227] [332556] (3 PDB entries)

    1. Domains for 5jvj:

       1. Domain d5jvja3: 5jvj A:516-874 [332825] Other proteins in same PDB: d5jvja1, d5jvja2, d5jvjb1, d5jvjb2 automated match to d1vbga1 complexed with mg, pep

       2. Domain d5jvjb3: 5jvj B:516-874 [332557] Other proteins in same PDB: d5jvja1, d5jvja2, d5jvjb1, d5jvjb2 automated match to d1vbga1 complexed with mg, pep

    2. Domains for 5jvl:

       1. Domain d5jvla3: 5jvl A:516-874 [332563] Other proteins in same PDB: d5jvla1, d5jvla2, d5jvlc1, d5jvlc2, d5jvld1, d5jvld2 automated match to d1vbga1 complexed with 6nq, mg, pep

       2. Domain d5jvlb1: 5jvl B:516-874 [332656] Other proteins in same PDB: d5jvla1, d5jvla2, d5jvlc1, d5jvlc2, d5jvld1, d5jvld2 automated match to d1vbga1 complexed with 6nq, mg, pep

       3. Domain d5jvlc3: 5jvl C:516-874 [332698] Other proteins in same PDB: d5jvla1, d5jvla2, d5jvlc1, d5jvlc2, d5jvld1, d5jvld2 automated match to d1vbga1 complexed with 6nq, mg, pep

       4. Domain d5jvld3: 5jvl D:516-874 [332597] Other proteins in same PDB: d5jvla1, d5jvla2, d5jvlc1, d5jvlc2, d5jvld1, d5jvld2 automated match to d1vbga1 complexed with 6nq, mg, pep

    3. Domains for 5lu4:

       1. Domain d5lu4a3: 5lu4 A:516-872 [334490] Other proteins in same PDB: d5lu4a1, d5lu4a2, d5lu4b1, d5lu4b2 automated match to d1vbga1 complexed with adp, mg, pyr

       2. Domain d5lu4b3: 5lu4 B:516-872 [334481] Other proteins in same PDB: d5lu4a1, d5lu4a2, d5lu4b1, d5lu4b2 automated match to d1vbga1 complexed with adp, mg, pyr

11. Staphylococcus aureus [TaxId:426430] [260815] (2 PDB entries)

    1. Domain for 4tv5:

       • Domain d4tv5a_: 4tv5 A: [260819] automated match to d3qz6a_ complexed with ca

    2. Domain for 4tv6:

       • Domain d4tv6a_: 4tv6 A: [260816] automated match to d3qz6a_ complexed with oaa

12. Streptomyces platensis [TaxId:58346] [330207] (1 PDB entry)

    • Domains for 5unc:

      1. Domain d5unca_: 5unc A: [330301] automated match to d4iqea_ complexed with fmt, tla, xys

      2. Domain d5uncb_: 5unc B: [330292] automated match to d4iqea_ complexed with fmt, tla, xys

      3. Domain d5uncc_: 5unc C: [330278] automated match to d4iqea_ complexed with fmt, tla, xys

      4. Domain d5uncd_: 5unc D: [330208] automated match to d4iqea_ complexed with fmt, tla, xys

13. Trypanosome (Trypanosoma brucei) [TaxId:5691] [311143] (1 PDB entry)

    • Domain for 1h6z:

      • Domain d1h6za6: 1h6z A:538-903 [302458] Other proteins in same PDB: d1h6za4, d1h6za5 automated match to d2x0sa1

14. Variovorax sp. [TaxId:218557] [187638] (3 PDB entries)

    1. Domain for 2dua:

       • Domain d2duaa_: 2dua A: [163699] automated match to d1s2vb_ complexed with cl, mg, na, oxl, xys

    2. Domain for 2hjp:

       • Domain d2hjpa_: 2hjp A: [165131] automated match to d1s2vb_ complexed with cl, mg, na, ppr, xys

    3. Domain for 2hrw:

       • Domain d2hrwa_: 2hrw A: [165225] automated match to d1s2vb_ complexed with cl, na

15. Yersinia pestis [TaxId:632] [256040] (1 PDB entry)

    • Domains for 3qll:

      1. Domain d3qlla_: 3qll A: [248928] automated match to d1sgja_

      2. Domain d3qllb_: 3qll B: [248929] automated match to d1sgja_

      3. Domain d3qllc_: 3qll C: [248930] automated match to d1sgja_

More info for Protein automated matches from c.1.12.0: automated matches

Timeline for Protein automated matches from c.1.12.0: automated matches:

• Protein automated matches from c.1.12.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.1.12.0: automated matches appears in SCOPe 2.05
  
• Protein automated matches from c.1.12.0: automated matches appears in SCOPe 2.07
  
• Protein automated matches from c.1.12.0: automated matches appears in the current release, SCOPe 2.08