Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3009890Fold d.290: AF0104/ALDC/Ptd012-like [117855] (1 superfamily)
    duplication: consists of two similar beta-alpha-beta(4) motifs
  4. 3009891Superfamily d.290.1: AF0104/ALDC/Ptd012-like [117856] (4 families) (S)
    characteristic metal ion (zinc)-binding motif in the putative active site
  5. 3009917Family d.290.1.0: automated matches [191426] (1 protein)
    not a true family
  6. 3009918Protein automated matches [190613] (9 species)
    not a true protein

Species:

  1. 3009919Bacillus subtilis [TaxId:224308] [355553] (1 PDB entry)
  2. 3009922Bacillus subtilis [TaxId:655816] [376686] (1 PDB entry)
  3. 3009925Bacteroides thetaiotaomicron [TaxId:226186] [188947] (1 PDB entry)
  4. 3009929Brevibacillus brevis [TaxId:1393] [419894] (6 PDB entries)
    1. Domain for 4bt2:
    2. Domain for 4bt3:
    3. Domain for 4bt4:
    4. Domain for 4bt5:
    5. Domain for 4bt6:
    6. Domain for 4bt7:
  5. 3009936Klebsiella aerogenes [TaxId:548] [358657] (2 PDB entries)
    1. Domains for 5yho:
      1. 3009939Domain d5yhoa_: 5yho A: [358729]
        automated match to d1xv2a_
        complexed with cl, zn
      2. 3009940Domain d5yhob_: 5yho B: [358717]
        automated match to d1xv2a_
        complexed with cl, zn
    2. Domains for 6j92:
      1. 3009937Domain d6j92a_: 6j92 A: [379206]
        automated match to d1xv2a_
        complexed with cl, zn
      2. 3009938Domain d6j92b_: 6j92 B: [379210]
        automated match to d1xv2a_
        complexed with cl, zn
  6. 3009941Klebsiella pneumoniae [TaxId:573] [362186] (2 PDB entries)
    1. Domain for 6inb:
    2. Domain for 6inc:
  7. 3009944Pyrococcus horikoshii [TaxId:53953] [187635] (1 PDB entry)
  8. 3009946Ralstonia eutropha [TaxId:264198] [196558] (1 PDB entry)
  9. 3009948Vibrio cholerae [TaxId:666] [188821] (1 PDB entry)

More info for Protein automated matches from d.290.1.0: automated matches

Timeline for Protein automated matches from d.290.1.0: automated matches: