Class b: All beta proteins [48724] (176 folds) |
Fold b.42: beta-Trefoil [50352] (8 superfamilies) barrel, closed; n=6, S=12; and a hairpin triplet; meander duplication: has internal pseudo threefold symmetry |
Superfamily b.42.2: Ricin B-like lectins [50370] (4 families) |
Family b.42.2.1: Ricin B-like [50371] (11 proteins) |
Protein automated matches [190608] (3 species) not a true protein |
Clostridium botulinum [TaxId:1491] [230685] (3 PDB entries) |
Domain d2e4ma1: 2e4m A:2-148 [230686] automated match to d1qxma1 |
Domain d2e4ma2: 2e4m A:149-286 [230687] automated match to d1qxma2 |
Domain d2e4mb1: 2e4m B:2-148 [230688] automated match to d1qxma1 |
Domain d2e4mb2: 2e4m B:149-286 [230689] automated match to d1qxma2 |
Domain d3aj5a1: 3aj5 A:4-148 [231795] automated match to d1qxma1 complexed with nga |
Domain d3aj5a2: 3aj5 A:149-286 [231800] automated match to d1qxma2 complexed with nga |
Domain d3aj5b1: 3aj5 B:4-148 [231796] automated match to d1qxma1 complexed with nga |
Domain d3aj5b2: 3aj5 B:149-286 [231801] automated match to d1qxma2 complexed with nga |
Domain d3aj6a1: 3aj6 A:4-148 [231797] automated match to d1qxma1 complexed with nga; mutant |
Domain d3aj6a2: 3aj6 A:149-286 [231799] automated match to d1qxma2 complexed with nga; mutant |
Domain d3aj6b1: 3aj6 B:3-148 [231798] automated match to d1qxma1 complexed with nga; mutant |
Domain d3aj6b2: 3aj6 B:149-286 [231802] automated match to d1qxma2 complexed with nga; mutant |
Common earthworm (Lumbricus terrestris) [TaxId:6398] [187630] (3 PDB entries) |
Domain d2drya_: 2dry A: [163668] automated match to d2zqna1 complexed with pge, so4; mutant |
Domain d2dryb_: 2dry B: [163669] automated match to d2zqna1 complexed with pge, so4; mutant |
Domain d2drza_: 2drz A: [163670] automated match to d2zqna1 complexed with so4; mutant |
Domain d2drzb_: 2drz B: [163671] automated match to d2zqna1 complexed with so4; mutant |
Domain d2ds0a_: 2ds0 A: [163672] automated match to d2zqna1 complexed with so4; mutant |
Domain d2ds0b_: 2ds0 B: [163673] automated match to d2zqna1 complexed with so4; mutant |
European mistletoe (Viscum album) [TaxId:3972] [225471] (5 PDB entries) |
Domain d2rg9b1: 2rg9 B:1-137 [152008] Other proteins in same PDB: d2rg9a_ automated match to d2rg9b1 complexed with azi, cl, gol, nag, so4 |
Domain d2rg9b2: 2rg9 B:138-263 [152009] Other proteins in same PDB: d2rg9a_ automated match to d1sz6b2 complexed with azi, cl, gol, nag, so4 |
Domain d3d7wb1: 3d7w B:249-384 [157434] Other proteins in same PDB: d3d7wa_ automated match to d2rg9b1 complexed with gol, nag, so4, zea, zez |
Domain d3d7wb2: 3d7w B:385-510 [157435] Other proteins in same PDB: d3d7wa_ automated match to d1sz6b2 complexed with gol, nag, so4, zea, zez |
Domain d3o5wb1: 3o5w B:249-384 [200012] Other proteins in same PDB: d3o5wa_ automated match to d1oqlb1 complexed with gol, h35, nag, so4 |
Domain d3o5wb2: 3o5w B:385-510 [200013] Other proteins in same PDB: d3o5wa_ automated match to d1oqlb2 complexed with gol, h35, nag, so4 |
Domain d4eb2b1: 4eb2 B:1-137 [201825] Other proteins in same PDB: d4eb2a_ automated match to d2rg9b1 complexed with azi, cl, edo, gol, nag, peg, so4 |
Domain d4eb2b2: 4eb2 B:138-263 [201826] Other proteins in same PDB: d4eb2a_ automated match to d1sz6b2 complexed with azi, cl, edo, gol, nag, peg, so4 |
Domain d4jkxb1: 4jkx B:1-137 [256794] Other proteins in same PDB: d4jkxa_ automated match to d1sz6b1 complexed with azi, cl, dio, edo, gol, h35, nag, so4 |
Domain d4jkxb2: 4jkx B:138-263 [256795] Other proteins in same PDB: d4jkxa_ automated match to d1sz6b2 complexed with azi, cl, dio, edo, gol, h35, nag, so4 |
Timeline for Protein automated matches from b.42.2.1: Ricin B-like: