Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1143363Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1143364Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1143365Superfamily c.1.1: Triosephosphate isomerase (TIM) [51351] (2 families) (S)
  5. 1143683Family c.1.1.0: automated matches [191424] (1 protein)
    not a true family
  6. 1143684Protein automated matches [190605] (3 species)
    not a true protein

Species:

  1. 1143685Giardia intestinalis [TaxId:5741] [187625] (8 PDB entries)
    1. Domain for 2dp3:
    2. Domain for 2yc6:
    3. Domain for 2yc7:
    4. Domain for 2yc8:
    5. Domain for 3pf3:
    6. Domains for 4bi5:
      1. 1143691Domain d4bi5a_: 4bi5 A: [197226]
        automated match to d2yc8r_
        mutant
      2. 1143692Domain d4bi5b_: 4bi5 B: [197227]
        automated match to d2yc8r_
        mutant
      3. 1143693Domain d4bi5c_: 4bi5 C: [197228]
        automated match to d2yc8r_
        mutant
      4. 1143694Domain d4bi5d_: 4bi5 D: [197229]
        automated match to d2yc8r_
        mutant
      5. 1143695Domain d4bi5e_: 4bi5 E: [197230]
        automated match to d2yc8r_
        mutant
    7. Domain for 4bi6:
    8. Domain for 4bi7:
  2. 1143698Mycobacterium tuberculosis [TaxId:83332] [189828] (2 PDB entries)
    1. Domains for 3ta6:
      1. 1143699Domain d3ta6a_: 3ta6 A: [185739]
        automated match to d1b9bb_
        complexed with flc
      2. 1143700Domain d3ta6b_: 3ta6 B: [185740]
        automated match to d1b9bb_
        complexed with flc
    2. Domains for 3tao:
      1. 1143701Domain d3taoa_: 3tao A: [185742]
        automated match to d1b9bb_
        complexed with pgh
      2. 1143702Domain d3taob_: 3tao B: [185743]
        automated match to d1b9bb_
        complexed with pgh
  3. 1143703Trichomonas vaginalis [TaxId:5722] [195009] (2 PDB entries)
    1. Domain for 3qsr:
    2. Domain for 3qst:

More info for Protein automated matches from c.1.1.0: automated matches

Timeline for Protein automated matches from c.1.1.0: automated matches: