SCOPe 2.03: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.110: DTD-like [69499] (1 superfamily)
beta(2)-(alpha-beta)2-beta(3); 3 layers, a/b/b; some topological similarity to the N-terminal domain of MinC
Superfamily c.110.1: DTD-like [69500] (2 families)
active form is a dimer
Family c.110.1.0: automated matches [191422] (1 protein)
not a true family
Protein automated matches [190596] (2 species)
not a true protein

Species:

Aquifex aeolicus [TaxId:224324] [187612] (1 PDB entry)
- Domain for 2dbo:
  - Domain d2dboa_: 2dbo A: [163608]
    automated match to d1j7ga_
Plasmodium falciparum [TaxId:36329] [196467] (11 PDB entries)
1. Domains for 3ko3:
  1. Domain d3ko3a_: 3ko3 A: [212433]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  2. Domain d3ko3b_: 3ko3 B: [212434]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  3. Domain d3ko3c_: 3ko3 C: [212435]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  4. Domain d3ko3d_: 3ko3 D: [212436]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  5. Domain d3ko3e_: 3ko3 E: [212437]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  6. Domain d3ko3f_: 3ko3 F: [212438]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
2. Domains for 3ko4:
  1. Domain d3ko4a_: 3ko4 A: [212439]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  2. Domain d3ko4b_: 3ko4 B: [212440]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  3. Domain d3ko4c_: 3ko4 C: [212441]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  4. Domain d3ko4d_: 3ko4 D: [212442]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  5. Domain d3ko4e_: 3ko4 E: [212443]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  6. Domain d3ko4f_: 3ko4 F: [212444]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
3. Domains for 3ko5:
  1. Domain d3ko5a_: 3ko5 A: [212445]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  2. Domain d3ko5b_: 3ko5 B: [212446]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  3. Domain d3ko5c_: 3ko5 C: [212447]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  4. Domain d3ko5d_: 3ko5 D: [212448]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  5. Domain d3ko5e_: 3ko5 E: [212449]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
  6. Domain d3ko5f_: 3ko5 F: [212450]
    automated match to d3lmvf_
    protein/RNA complex; complexed with adp
4. Domains for 3ko7:
  1. Domain d3ko7a_: 3ko7 A: [212451]
    automated match to d3lmvf_
    complexed with dly
  2. Domain d3ko7b_: 3ko7 B: [212452]
    automated match to d3lmvf_
    complexed with dly
  3. Domain d3ko7c_: 3ko7 C: [212453]
    automated match to d3lmvf_
    complexed with dly
  4. Domain d3ko7d_: 3ko7 D: [212454]
    automated match to d3lmvf_
    complexed with dly
  5. Domain d3ko7e_: 3ko7 E: [212455]
    automated match to d3lmvf_
    complexed with dly
  6. Domain d3ko7f_: 3ko7 F: [212456]
    automated match to d3lmvf_
    complexed with dly
5. Domains for 3ko9:
  1. Domain d3ko9a_: 3ko9 A: [212457]
    automated match to d3lmvf_
    complexed with dar
  2. Domain d3ko9b_: 3ko9 B: [212458]
    automated match to d3lmvf_
    complexed with dar
  3. Domain d3ko9c_: 3ko9 C: [212459]
    automated match to d3lmvf_
    complexed with dar
  4. Domain d3ko9d_: 3ko9 D: [212460]
    automated match to d3lmvf_
    complexed with dar
  5. Domain d3ko9e_: 3ko9 E: [212461]
    automated match to d3lmvf_
    complexed with dar
  6. Domain d3ko9f_: 3ko9 F: [212462]
    automated match to d3lmvf_
    complexed with dar
6. Domains for 3kob:
  1. Domain d3koba_: 3kob A: [212463]
    automated match to d3lmvf_
    complexed with dgl
  2. Domain d3kobb_: 3kob B: [212464]
    automated match to d3lmvf_
    complexed with dgl
  3. Domain d3kobc_: 3kob C: [212465]
    automated match to d3lmvf_
    complexed with dgl
  4. Domain d3kobd_: 3kob D: [212466]
    automated match to d3lmvf_
    complexed with dgl
  5. Domain d3kobe_: 3kob E: [212467]
    automated match to d3lmvf_
    complexed with dgl
  6. Domain d3kobf_: 3kob F: [212468]
    automated match to d3lmvf_
    complexed with dgl
7. Domains for 3koc:
  1. Domain d3koca_: 3koc A: [212469]
    automated match to d3lmvf_
    complexed with dhi
  2. Domain d3kocb_: 3koc B: [212470]
    automated match to d3lmvf_
    complexed with dhi
  3. Domain d3kocc_: 3koc C: [212471]
    automated match to d3lmvf_
    complexed with dhi
  4. Domain d3kocd_: 3koc D: [212472]
    automated match to d3lmvf_
    complexed with dhi
  5. Domain d3koce_: 3koc E: [212473]
    automated match to d3lmvf_
    complexed with dhi
  6. Domain d3kocf_: 3koc F: [212474]
    automated match to d3lmvf_
    complexed with dhi
8. Domains for 3lmt:
  1. Domain d3lmta_: 3lmt A: [212938]
    automated match to d3lmvf_
    complexed with iod
  2. Domain d3lmtb_: 3lmt B: [212939]
    automated match to d3lmvf_
    complexed with iod
  3. Domain d3lmtc_: 3lmt C: [212940]
    automated match to d3lmvf_
    complexed with iod
  4. Domain d3lmtd_: 3lmt D: [212941]
    automated match to d3lmvf_
    complexed with iod
  5. Domain d3lmte_: 3lmt E: [212942]
    automated match to d3lmvf_
    complexed with iod
  6. Domain d3lmtf_: 3lmt F: [212943]
    automated match to d3lmvf_
    complexed with iod
9. Domains for 3lmv:
  1. Domain d3lmva_: 3lmv A: [199747]
    automated match to d3lmvf_
    protein/RNA complex; complexed with epe, so3
  2. Domain d3lmvb_: 3lmv B: [199748]
    automated match to d3lmvf_
    protein/RNA complex; complexed with epe, so3
  3. Domain d3lmvc_: 3lmv C: [199749]
    automated match to d3lmvf_
    protein/RNA complex; complexed with epe, so3
  4. Domain d3lmvd_: 3lmv D: [199750]
    automated match to d3lmvf_
    protein/RNA complex; complexed with epe, so3
  5. Domain d3lmve_: 3lmv E: [199751]
    automated match to d3lmvf_
    protein/RNA complex; complexed with epe, so3
  6. Domain d3lmvf_: 3lmv F: [196468]
    automated match to d2dboa_
    protein/RNA complex; complexed with epe, so3
10. Domains for 4nbi:
  1. Domain d4nbia_: 4nbi A: [229940]
    automated match to d3ko5c_
    protein/RNA complex; complexed with d3y, pge
  2. Domain d4nbib_: 4nbi B: [229941]
    automated match to d3ko3d_
    protein/RNA complex; complexed with d3y, pge
11. Domains for 4nbj:
  1. Domain d4nbja_: 4nbj A: [229942]
    automated match to d3ko3d_
    protein/RNA complex; complexed with d3y
  2. Domain d4nbjb_: 4nbj B: [229943]
    automated match to d3ko3e_
    protein/RNA complex; complexed with d3y
  3. Domain d4nbjc_: 4nbj C: [229944]
    automated match to d3ko3d_
    protein/RNA complex; complexed with d3y
  4. Domain d4nbjd_: 4nbj D: [229945]
    automated match to d3ko3e_
    protein/RNA complex; complexed with d3y
  5. Domain d4nbje_: 4nbj E: [229946]
    automated match to d3ko3d_
    protein/RNA complex; complexed with d3y
  6. Domain d4nbjf_: 4nbj F: [229947]
    automated match to d3ko3e_
    protein/RNA complex; complexed with d3y
  7. Domain d4nbjg_: 4nbj G: [229948]
    automated match to d3ko3e_
    protein/RNA complex; complexed with d3y
  8. Domain d4nbjh_: 4nbj H: [229949]
    automated match to d3ko3d_
    protein/RNA complex; complexed with d3y

More info for Protein automated matches from c.110.1.0: automated matches

Timeline for Protein automated matches from c.110.1.0: automated matches:

Protein automated matches from c.110.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from c.110.1.0: automated matches appears in SCOPe 2.02
Protein automated matches from c.110.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from c.110.1.0: automated matches appears in the current release, SCOPe 2.08