Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 901762Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 901763Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 904007Family a.1.1.0: automated matches [191420] (1 protein)
    not a true family
  6. 904008Protein automated matches [190590] (10 species)
    not a true protein

Species:

  1. 904009Agrobacterium tumefaciens [TaxId:358] [189552] (1 PDB entry)
  2. 904012Campylobacter jejuni [TaxId:197] [187859] (2 PDB entries)
    1. Domains for 2ig3:
      1. 904014Domain d2ig3a_: 2ig3 A: [165538]
        automated match to d1ux8a_
        complexed with act, cyn, hem, so4
      2. 904015Domain d2ig3b_: 2ig3 B: [165539]
        automated match to d1ux8a_
        complexed with act, cyn, hem, so4
    2. Domain for 2wy4:
  3. 904016Clam (Lucina pectinata) [TaxId:244486] [188300] (3 PDB entries)
    1. Domains for 2olp:
      1. 904018Domain d2olpa_: 2olp A: [166763]
        automated match to d1b0ba_
        complexed with hem, oxy, so4
      2. 904019Domain d2olpb_: 2olp B: [166764]
        automated match to d1b0ba_
        complexed with hem, oxy, so4
    2. Domain for 3pt7:
    3. Domain for 3pt8:
  4. 904021Fasciola hepatica [TaxId:6192] [188561] (1 PDB entry)
  5. 904023Fruit fly (Drosophila melanogaster) [TaxId:7227] [187733] (1 PDB entry)
  6. 904025Lucina pectinata [TaxId:244486] [189795] (1 PDB entry)
  7. 904028Nematode (Caenorhabditis elegans) [TaxId:6239] [189323] (2 PDB entries)
    1. Domain for 2wtg:
    2. Domains for 2wth:
      1. 904030Domain d2wtha_: 2wth A: [169616]
        automated match to d1asha_
        complexed with gol, hem, oxy, so4
      2. 904031Domain d2wthb_: 2wth B: [169617]
        automated match to d1asha_
        complexed with gol, hem, oxy, so4
  8. 904032Oligobrachia mashikoi [TaxId:55676] [187601] (4 PDB entries)
    1. Domains for 2d2m:
      1. 904045Domain d2d2ma_: 2d2m A: [163559]
        automated match to d1x9fb_
        complexed with hem, oxy
      2. 904046Domain d2d2mb_: 2d2m B: [163560]
        automated match to d1x9fb_
        complexed with hem, oxy
      3. 904047Domain d2d2mc_: 2d2m C: [163561]
        automated match to d1x9fa_
        complexed with hem, oxy
      4. 904048Domain d2d2md_: 2d2m D: [163562]
        automated match to d1x9fa_
        complexed with hem, oxy
    2. Domains for 2zfo:
      1. 904041Domain d2zfoa_: 2zfo A: [171194]
        automated match to d1x9fb_
        complexed with gol, hem, oxy
      2. 904042Domain d2zfob_: 2zfo B: [171195]
        automated match to d1x9fb_
        complexed with gol, hem, oxy
      3. 904043Domain d2zfoc_: 2zfo C: [171196]
        automated match to d1x9fa_
        complexed with gol, hem, oxy
      4. 904044Domain d2zfod_: 2zfo D: [171197]
        automated match to d1x9fa_
        complexed with gol, hem, oxy
    3. Domains for 2zs0:
      1. 904033Domain d2zs0a_: 2zs0 A: [171448]
        automated match to d1x9fb_
        complexed with ca, cl, gol, hem, oxy
      2. 904034Domain d2zs0b_: 2zs0 B: [171449]
        automated match to d1x9fb_
        complexed with ca, cl, gol, hem, oxy
      3. 904035Domain d2zs0c_: 2zs0 C: [171450]
        automated match to d1x9fa_
        complexed with ca, cl, gol, hem, oxy
      4. 904036Domain d2zs0d_: 2zs0 D: [171451]
        automated match to d1x9fa_
        complexed with ca, cl, gol, hem, oxy
    4. Domains for 2zs1:
      1. 904037Domain d2zs1a_: 2zs1 A: [171452]
        automated match to d1x9fb_
        complexed with cl, gol, hem, mg, oxy
      2. 904038Domain d2zs1b_: 2zs1 B: [171453]
        automated match to d1x9fb_
        complexed with cl, gol, hem, mg, oxy
      3. 904039Domain d2zs1c_: 2zs1 C: [171454]
        automated match to d1x9fa_
        complexed with cl, gol, hem, mg, oxy
      4. 904040Domain d2zs1d_: 2zs1 D: [171455]
        automated match to d1x9fa_
        complexed with cl, gol, hem, mg, oxy
  9. 904049Phacoides pectinatus [TaxId:244486] [189796] (2 PDB entries)
    1. Domains for 3pi2:
      1. 904050Domain d3pi2a_: 3pi2 A: [183752]
        automated match to d1b0ba_
        complexed with ace, fmt, hem, oxy
      2. 904051Domain d3pi2b_: 3pi2 B: [183753]
        automated match to d1b0ba_
        complexed with ace, fmt, hem, oxy
    2. Domains for 3pi3:
      1. 904052Domain d3pi3a_: 3pi3 A: [183754]
        automated match to d1b0ba_
        complexed with hem, oxy
      2. 904053Domain d3pi3b_: 3pi3 B: [183755]
        automated match to d1b0ba_
        complexed with hem, oxy
  10. 904054Tokunagayusurika akamusi [TaxId:28383] [188112] (1 PDB entry)

More info for Protein automated matches from a.1.1.0: automated matches

Timeline for Protein automated matches from a.1.1.0: automated matches: