Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1841351Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 1841352Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families) (S)
  5. 1841353Family c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain [52375] (13 proteins)
    contains a conserved all-alpha subdomain at the C-terminal extension
  6. 1841582Protein automated matches [190581] (8 species)
    not a true protein

Species:

  1. 1841583Archaeoglobus fulgidus [TaxId:2234] [187585] (1 PDB entry)
  2. 1841586Escherichia coli [TaxId:562] [188048] (3 PDB entries)
    1. Domains for 1vbm:
      1. 1841590Domain d1vbma_: 1vbm A: [161842]
        automated match to d1tyae_
        protein/RNA complex; complexed with so4, ysa
      2. 1841591Domain d1vbmb_: 1vbm B: [161843]
        automated match to d1tyae_
        protein/RNA complex; complexed with so4, ysa
    2. Domains for 1vbn:
      1. 1841588Domain d1vbna_: 1vbn A: [161844]
        automated match to d1tyae_
        protein/RNA complex; complexed with ysa; mutant
      2. 1841589Domain d1vbnb_: 1vbn B: [161845]
        automated match to d1tyae_
        protein/RNA complex; complexed with ysa; mutant
    3. Domain for 1x8x:
  3. 1841592Methanocaldococcus jannaschii [TaxId:2190] [188187] (8 PDB entries)
    1. Domain for 1zh0:
    2. Domain for 2pxh:
    3. Domain for 2zp1:
    4. Domain for 3d6u:
    5. Domain for 3d6v:
    6. Domain for 4hk4:
    7. Domain for 4hpw:
    8. Domain for 4nx2:
  4. 1841601Methanocaldococcus jannaschii [TaxId:243232] [193079] (8 PDB entries)
    1. Domains for 4hjr:
      1. 1841608Domain d4hjra_: 4hjr A: [193081]
        automated match to d2pxha_
      2. 1841609Domain d4hjrb_: 4hjr B: [193080]
        automated match to d2pxha_
    2. Domains for 4hjx:
      1. 1841610Domain d4hjxa_: 4hjx A: [222644]
        automated match to d4hjrb_
        protein/RNA complex; complexed with f2y
      2. 1841611Domain d4hjxb_: 4hjx B: [222645]
        automated match to d4hjrb_
        protein/RNA complex; complexed with f2y
    3. Domain for 4nd6:
    4. Domain for 4nd7:
    5. Domain for 4nda:
    6. Domain for 4pbr:
    7. Domain for 4pbs:
    8. Domain for 4pbt:
  5. 1841612Thermus thermophilus HB8 [TaxId:300852] [233866] (1 PDB entry)
  6. 1841614Thermus thermophilus [TaxId:274] [254946] (3 PDB entries)
    1. Domain for 1woy:
    2. Domain for 2d54:
    3. Domain for 2d5b:
  7. 1841618Vibrio cholerae [TaxId:243277] [196171] (1 PDB entry)
  8. 1841620Yersinia pestis [TaxId:214092] [189402] (1 PDB entry)

More info for Protein automated matches from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain

Timeline for Protein automated matches from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain: