Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2454323Fold c.44: Phosphotyrosine protein phosphatases I-like [52787] (3 superfamilies)
    3 layers: a/b/a; parallel beta-sheet of 4 strands, order 2134
  4. 2454324Superfamily c.44.1: Phosphotyrosine protein phosphatases I [52788] (2 families) (S)
    share the common active site structure with the family II
  5. 2454393Family c.44.1.0: automated matches [191415] (1 protein)
    not a true family
  6. 2454394Protein automated matches [190574] (17 species)
    not a true protein

Species:

  1. 2454395Bacillus subtilis [TaxId:1423] [193436] (3 PDB entries)
    1. Domain for 4eti:
    2. Domains for 4etm:
      1. 2454397Domain d4etma1: 4etm A:-3-156 [201957]
        Other proteins in same PDB: d4etma2, d4etmb2
        automated match to d4etmb_
        complexed with k, na, po4
      2. 2454398Domain d4etmb1: 4etm B:1-155 [193437]
        Other proteins in same PDB: d4etma2, d4etmb2
        automated match to d5pnta_
        complexed with k, na, po4
    3. Domain for 4etn:
  2. 2454400Bacillus subtilis [TaxId:224308] [224891] (3 PDB entries)
    1. Domain for 1zgg:
    2. Domain for 4kk3:
    3. Domain for 4kk4:
  3. 2454404Campylobacter jejuni [TaxId:197] [255186] (1 PDB entry)
  4. 2454406Corynebacterium glutamicum [TaxId:1718] [226260] (1 PDB entry)
  5. 2454409Entamoeba histolytica [TaxId:294381] [196531] (4 PDB entries)
    1. Domains for 3ido:
      1. 2454412Domain d3idoa1: 3ido A:1-157 [232587]
        Other proteins in same PDB: d3idoa2, d3idob2
        automated match to d3jvia_
        complexed with epe
      2. 2454413Domain d3idob1: 3ido B:1-157 [232588]
        Other proteins in same PDB: d3idoa2, d3idob2
        automated match to d3jvia_
        complexed with epe
    2. Domains for 3ily:
      1. 2454414Domain d3ilya1: 3ily A:1-157 [237756]
        Other proteins in same PDB: d3ilya2, d3ilyb2
        automated match to d3idoa_
      2. 2454415Domain d3ilyb1: 3ily B:1-156 [237572]
        Other proteins in same PDB: d3ilya2, d3ilyb2
        automated match to d3idoa_
    3. Domain for 3js5:
    4. Domain for 3jvi:
  6. 2454416Erwinia amylovora [TaxId:716540] [311537] (1 PDB entry)
  7. 2454418Escherichia coli K-12 [TaxId:83333] [255169] (1 PDB entry)
  8. 2454420Escherichia coli [TaxId:562] [189034] (2 PDB entries)
    1. Domains for 2wja:
      1. 2454429Domain d2wjaa1: 2wja A:1-147 [206846]
        Other proteins in same PDB: d2wjaa2
        automated match to d2wmyf_
        complexed with ni, po4
      2. 2454430Domain d2wjab_: 2wja B: [206847]
        Other proteins in same PDB: d2wjaa2
        automated match to d2wmyf_
        complexed with ni, po4
    2. Domains for 2wmy:
      1. 2454421Domain d2wmya_: 2wmy A: [169465]
        automated match to d1bvha_
        complexed with ni, so4
      2. 2454422Domain d2wmyb_: 2wmy B: [169466]
        automated match to d1bvha_
        complexed with ni, so4
      3. 2454423Domain d2wmyc_: 2wmy C: [169467]
        automated match to d1bvha_
        complexed with ni, so4
      4. 2454424Domain d2wmyd_: 2wmy D: [169468]
        automated match to d1bvha_
        complexed with ni, so4
      5. 2454425Domain d2wmye_: 2wmy E: [169469]
        automated match to d1bvha_
        complexed with ni, so4
      6. 2454426Domain d2wmyf_: 2wmy F: [169470]
        automated match to d1bvha_
        complexed with ni, so4
      7. 2454427Domain d2wmyg_: 2wmy G: [169471]
        automated match to d1bvha_
        complexed with ni, so4
      8. 2454428Domain d2wmyh_: 2wmy H: [169472]
        automated match to d1bvha_
        complexed with ni, so4
  9. 2454431Geobacillus stearothermophilus [TaxId:1422] [257509] (1 PDB entry)
  10. 2454434Human (Homo sapiens) [TaxId:9606] [275117] (3 PDB entries)
    1. Domain for 4z99:
    2. Domain for 4z9a:
    3. Domain for 4z9b:
  11. 2454438Mycobacterium tuberculosis [TaxId:1773] [193848] (3 PDB entries)
    1. Domain for 1u2p:
    2. Domain for 1u2q:
    3. Domain for 2luo:
  12. 2454442Staphylococcus aureus [TaxId:1280] [193646] (1 PDB entry)
  13. 2454444Streptococcus pyogenes [TaxId:1314] [322172] (1 PDB entry)
  14. 2454446Synechocystis sp. [TaxId:1111708] [275616] (4 PDB entries)
    1. Domain for 2myn:
    2. Domain for 2myp:
    3. Domain for 2myt:
    4. Domain for 2myu:
  15. 2454451Thermoanaerobacter tengcongensis [TaxId:273068] [226489] (1 PDB entry)
  16. 2454454Thermus thermophilus HB8 [TaxId:300852] [187572] (1 PDB entry)
  17. 2454459Vibrio cholerae [TaxId:345073] [257854] (1 PDB entry)

More info for Protein automated matches from c.44.1.0: automated matches

Timeline for Protein automated matches from c.44.1.0: automated matches: