Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2376992Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2377239Superfamily b.2.3: Bacterial adhesins [49401] (7 families) (S)
  5. 2377244Family b.2.3.2: Pilus subunits [49405] (10 proteins)
  6. 2377427Protein automated matches [190569] (9 species)
    not a true protein

Species:

  1. 2377428Escherichia coli [TaxId:362663] [311670] (2 PDB entries)
    1. Domains for 4xoc:
      1. 2377429Domain d4xoca_: 4xoc A: [311671]
        automated match to d4csta_
        complexed with kgm
      2. 2377430Domain d4xocb_: 4xoc B: [311690]
        automated match to d4csta_
        complexed with kgm
    2. Domains for 4xoe:
      1. 2377431Domain d4xoea1: 4xoe A:1-158 [311854]
        automated match to d3zl2a_
        complexed with cac, kgm
      2. 2377432Domain d4xoea2: 4xoe A:159-279 [311855]
        automated match to d1klfb2
        complexed with cac, kgm
  2. 2377433Escherichia coli [TaxId:364106] [234099] (1 PDB entry)
  3. 2377435Escherichia coli [TaxId:488477] [232652] (2 PDB entries)
    1. Domains for 3jwn:
      1. 2377436Domain d3jwnh1: 3jwn H:1-158 [232653]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2
        automated match to d4av5a_
        complexed with gol
      2. 2377437Domain d3jwnh2: 3jwn H:159-279 [232654]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2
        automated match to d1ze3h1
        complexed with gol
      3. 2377438Domain d3jwnn1: 3jwn N:1-158 [232655]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2
        automated match to d4av5a_
        complexed with gol
      4. 2377439Domain d3jwnn2: 3jwn N:159-279 [232656]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2
        automated match to d1ze3h1
        complexed with gol
    2. Domains for 6gtw:
      1. 2377440Domain d6gtwa_: 6gtw A: [362141]
        automated match to d4xocb_
        complexed with ca, man
      2. 2377441Domain d6gtwb_: 6gtw B: [362146]
        automated match to d4xocb_
        complexed with ca, man
      3. 2377442Domain d6gtwc_: 6gtw C: [362147]
        automated match to d4xocb_
        complexed with ca, man
      4. 2377443Domain d6gtwd_: 6gtw D: [362197]
        automated match to d4xocb_
        complexed with ca, man
  4. 2377444Escherichia coli [TaxId:562] [188033] (7 PDB entries)
    1. Domains for 1tr7:
      1. 2377447Domain d1tr7a_: 1tr7 A: [119328]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
      2. 2377448Domain d1tr7b_: 1tr7 B: [119329]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
    2. Domain for 2uy6:
    3. Domains for 2uy7:
      1. 2377454Domain d2uy7d_: 2uy7 D: [145765]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      2. 2377455Domain d2uy7f_: 2uy7 F: [145766]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      3. 2377456Domain d2uy7h_: 2uy7 H: [145767]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
    4. Domains for 3rfz:
      1. 2377457Domain d3rfza1: 3rfz A:1-158 [233447]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d4av5a_
        complexed with so4
      2. 2377458Domain d3rfza2: 3rfz A:159-279 [233448]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d1ze3h1
        complexed with so4
      3. 2377459Domain d3rfzd1: 3rfz D:1-158 [239693]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza1
        complexed with so4
      4. 2377460Domain d3rfzd2: 3rfz D:159-279 [239694]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza2
        complexed with so4
    5. Domains for 4xod:
      1. 2377445Domain d4xoda1: 4xod A:1-158 [311749]
        automated match to d3zl2a_
      2. 2377446Domain d4xoda2: 4xod A:159-279 [311750]
        automated match to d1klfb2
    6. Domains for 5ab1:
      1. 2377451Domain d5ab1a_: 5ab1 A: [317184]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
      2. 2377452Domain d5ab1b_: 5ab1 B: [317173]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
    7. Domains for 6yhw:
      1. 2377449Domain d6yhwa_: 6yhw A: [385245]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
      2. 2377450Domain d6yhwb_: 6yhw B: [385236]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
  5. 2377461Escherichia coli [TaxId:83333] [269237] (14 PDB entries)
    1. Domain for 4css:
    2. Domain for 4cst:
    3. Domains for 4xob:
      1. 2377501Domain d4xoba1: 4xob A:1-158 [311863]
        automated match to d3zl2a_
        complexed with kgm, so4
      2. 2377502Domain d4xoba2: 4xob A:159-279 [311864]
        automated match to d1klfb2
        complexed with kgm, so4
      3. 2377503Domain d4xobc1: 4xob C:1-158 [311758]
        automated match to d3zl2a_
        complexed with kgm, so4
      4. 2377504Domain d4xobc2: 4xob C:159-279 [311759]
        automated match to d1klfb2
        complexed with kgm, so4
      5. 2377505Domain d4xobe1: 4xob E:1-158 [311919]
        automated match to d3zl2a_
        complexed with kgm, so4
      6. 2377506Domain d4xobe2: 4xob E:159-279 [311920]
        automated match to d1klfb2
        complexed with kgm, so4
      7. 2377507Domain d4xobg1: 4xob G:1-158 [311647]
        automated match to d3zl2a_
        complexed with kgm, so4
      8. 2377508Domain d4xobg2: 4xob G:159-279 [311648]
        automated match to d1klfb2
        complexed with kgm, so4
    4. Domains for 5aal:
      1. 2377493Domain d5aala_: 5aal A: [312478]
        automated match to d4csta_
        complexed with 8l8, ni, so4
      2. 2377494Domain d5aalb_: 5aal B: [313088]
        automated match to d4csta_
        complexed with 8l8, ni, so4
    5. Domain for 5aap:
    6. Domains for 5abz:
      1. 2377491Domain d5abza_: 5abz A: [313051]
        automated match to d4csta_
        complexed with ni, z47
      2. 2377492Domain d5abzb_: 5abz B: [313048]
        automated match to d4csta_
        complexed with ni, z47
    7. Domain for 5fs5:
    8. Domains for 5fwr:
      1. 2377474Domain d5fwra_: 5fwr A: [326642]
        automated match to d4csta_
        complexed with 3x8; mutant
      2. 2377475Domain d5fwrb_: 5fwr B: [326643]
        automated match to d4csta_
        complexed with 3x8; mutant
      3. 2377476Domain d5fwrc_: 5fwr C: [326684]
        automated match to d4csta_
        complexed with 3x8; mutant
      4. 2377477Domain d5fwrd_: 5fwr D: [326663]
        automated match to d4csta_
        complexed with 3x8; mutant
      5. 2377478Domain d5fwre_: 5fwr E: [326722]
        automated match to d4csta_
        complexed with 3x8; mutant
      6. 2377479Domain d5fwrf_: 5fwr F: [326707]
        automated match to d4csta_
        complexed with 3x8; mutant
      7. 2377480Domain d5fwrg_: 5fwr G: [326782]
        automated match to d4csta_
        complexed with 3x8; mutant
      8. 2377481Domain d5fwrh_: 5fwr H: [326625]
        automated match to d4csta_
        complexed with 3x8; mutant
    9. Domain for 5fx3:
    10. Domains for 5muc:
      1. 2377499Domain d5muca_: 5muc A: [346544]
        automated match to d5ab1a_
        complexed with ah2
      2. 2377500Domain d5mucb_: 5muc B: [346532]
        automated match to d5ab1a_
        complexed with ah2
    11. Domains for 6g2r:
      1. 2377472Domain d6g2ra_: 6g2r A: [366456]
        automated match to d5ab1a_
        complexed with ejk, epe, so4
      2. 2377473Domain d6g2rb_: 6g2r B: [366452]
        automated match to d5ab1a_
        complexed with ejk, epe, so4
    12. Domains for 6g2s:
      1. 2377482Domain d6g2sa_: 6g2s A: [366524]
        automated match to d5ab1a_
        complexed with ejn, so4
      2. 2377483Domain d6g2sb_: 6g2s B: [366472]
        automated match to d5ab1a_
        complexed with ejn, so4
      3. 2377484Domain d6g2sc_: 6g2s C: [366451]
        automated match to d5ab1a_
        complexed with ejn, so4
      4. 2377485Domain d6g2sd_: 6g2s D: [366523]
        automated match to d5ab1a_
        complexed with ejn, so4
      5. 2377486Domain d6g2se_: 6g2s E: [366547]
        automated match to d5ab1a_
        complexed with ejn, so4
      6. 2377487Domain d6g2sf_: 6g2s F: [366462]
        automated match to d5ab1a_
        complexed with ejn, so4
      7. 2377488Domain d6g2sg_: 6g2s G: [366494]
        automated match to d5ab1a_
        complexed with ejn, so4
      8. 2377489Domain d6g2sh_: 6g2s H: [366520]
        automated match to d5ab1a_
        complexed with ejn, so4
      9. 2377490Domain d6g2si_: 6g2s I: [366507]
        automated match to d5ab1a_
        complexed with ejn, so4
    13. Domains for 6gtx:
      1. 2377495Domain d6gtxa_: 6gtx A: [362167]
        automated match to d5ab1a_
        complexed with man, mma, so4
      2. 2377496Domain d6gtxb_: 6gtx B: [362159]
        automated match to d5ab1a_
        complexed with man, mma, so4
      3. 2377497Domain d6gtxc_: 6gtx C: [362206]
        automated match to d5ab1a_
        complexed with man, mma, so4
      4. 2377498Domain d6gtxd_: 6gtx D: [362145]
        automated match to d5ab1a_
        complexed with man, mma, so4
    14. Domains for 6gty:
      1. 2377467Domain d6gtya_: 6gty A: [362173]
        automated match to d5ab1a_
        complexed with man, mma
      2. 2377468Domain d6gtyb_: 6gty B: [362172]
        automated match to d5ab1a_
        complexed with man, mma
      3. 2377469Domain d6gtyc_: 6gty C: [362221]
        automated match to d5ab1a_
        complexed with man, mma
      4. 2377470Domain d6gtyd_: 6gty D: [362163]
        automated match to d5ab1a_
        complexed with man, mma
      5. 2377471Domain d6gtye_: 6gty E: [362164]
        automated match to d5ab1a_
        complexed with man, mma
  6. 2377509Salmonella enterica [TaxId:28901] [187562] (1 PDB entry)
  7. 2377511Salmonella typhimurium [TaxId:90371] [187560] (4 PDB entries)
    1. Domain for 2cny:
    2. Domain for 2cnz:
    3. Domain for 2co1:
    4. Domain for 2co4:
  8. 2377516Salmonella typhimurium [TaxId:99287] [187563] (2 PDB entries)
    1. Domain for 2co3:
    2. Domain for 2co6:
  9. 2377519Yersinia pestis [TaxId:632] [188957] (3 PDB entries)
    1. Domains for 3dos:
      1. 2377526Domain d3dosb_: 3dos B: [174099]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      2. 2377527Domain d3dosc_: 3dos C: [174100]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      3. 2377528Domain d3dose_: 3dos E: [174101]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      4. 2377529Domain d3dosf_: 3dos F: [174102]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
    2. Domains for 3dpb:
      1. 2377520Domain d3dpbb_: 3dpb B: [174148]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
      2. 2377521Domain d3dpbc_: 3dpb C: [174149]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
    3. Domains for 3dsn:
      1. 2377522Domain d3dsnb_: 3dsn B: [174212]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      2. 2377523Domain d3dsnc_: 3dsn C: [174213]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      3. 2377524Domain d3dsne_: 3dsn E: [174214]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      4. 2377525Domain d3dsnf_: 3dsn F: [174215]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant

More info for Protein automated matches from b.2.3.2: Pilus subunits

Timeline for Protein automated matches from b.2.3.2: Pilus subunits: