Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2363595Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2363797Superfamily b.2.3: Bacterial adhesins [49401] (7 families) (S)
  5. 2363802Family b.2.3.2: Pilus subunits [49405] (10 protein domains)
  6. 2363981Protein automated matches [190569] (9 species)
    not a true protein

Species:

  1. 2363982Escherichia coli [TaxId:362663] [311670] (2 PDB entries)
    1. Domains for 4xoc:
      1. 2363983Domain d4xoca_: 4xoc A: [311671]
        automated match to d4csta_
        complexed with kgm
      2. 2363984Domain d4xocb_: 4xoc B: [311690]
        automated match to d4csta_
        complexed with kgm
    2. Domains for 4xoe:
      1. 2363985Domain d4xoea1: 4xoe A:1-158 [311854]
        automated match to d3zl2a_
        complexed with cac, kgm
      2. 2363986Domain d4xoea2: 4xoe A:159-279 [311855]
        automated match to d1klfb2
        complexed with cac, kgm
  2. 2363987Escherichia coli [TaxId:364106] [234099] (1 PDB entry)
  3. 2363989Escherichia coli [TaxId:488477] [232652] (1 PDB entry)
  4. 2363994Escherichia coli [TaxId:562] [188033] (6 PDB entries)
    1. Domains for 1tr7:
      1. 2363997Domain d1tr7a_: 1tr7 A: [119328]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
      2. 2363998Domain d1tr7b_: 1tr7 B: [119329]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
    2. Domain for 2uy6:
    3. Domains for 2uy7:
      1. 2364002Domain d2uy7d_: 2uy7 D: [145765]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      2. 2364003Domain d2uy7f_: 2uy7 F: [145766]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      3. 2364004Domain d2uy7h_: 2uy7 H: [145767]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
    4. Domains for 3rfz:
      1. 2364005Domain d3rfza1: 3rfz A:1-158 [233447]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d4av5a_
        complexed with so4
      2. 2364006Domain d3rfza2: 3rfz A:159-279 [233448]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d1ze3h1
        complexed with so4
      3. 2364007Domain d3rfzd1: 3rfz D:1-158 [239693]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza1
        complexed with so4
      4. 2364008Domain d3rfzd2: 3rfz D:159-279 [239694]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza2
        complexed with so4
    5. Domains for 4xod:
      1. 2363995Domain d4xoda1: 4xod A:1-158 [311749]
        automated match to d3zl2a_
      2. 2363996Domain d4xoda2: 4xod A:159-279 [311750]
        automated match to d1klfb2
    6. Domains for 5ab1:
      1. 2363999Domain d5ab1a_: 5ab1 A: [317184]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
      2. 2364000Domain d5ab1b_: 5ab1 B: [317173]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
  5. 2364009Escherichia coli [TaxId:83333] [269237] (10 PDB entries)
    1. Domain for 4css:
    2. Domain for 4cst:
    3. Domains for 4xob:
      1. 2364027Domain d4xoba1: 4xob A:1-158 [311863]
        automated match to d3zl2a_
        complexed with kgm, so4
      2. 2364028Domain d4xoba2: 4xob A:159-279 [311864]
        automated match to d1klfb2
        complexed with kgm, so4
      3. 2364029Domain d4xobc1: 4xob C:1-158 [311758]
        automated match to d3zl2a_
        complexed with kgm, so4
      4. 2364030Domain d4xobc2: 4xob C:159-279 [311759]
        automated match to d1klfb2
        complexed with kgm, so4
      5. 2364031Domain d4xobe1: 4xob E:1-158 [311919]
        automated match to d3zl2a_
        complexed with kgm, so4
      6. 2364032Domain d4xobe2: 4xob E:159-279 [311920]
        automated match to d1klfb2
        complexed with kgm, so4
      7. 2364033Domain d4xobg1: 4xob G:1-158 [311647]
        automated match to d3zl2a_
        complexed with kgm, so4
      8. 2364034Domain d4xobg2: 4xob G:159-279 [311648]
        automated match to d1klfb2
        complexed with kgm, so4
    4. Domains for 5aal:
      1. 2364025Domain d5aala_: 5aal A: [312478]
        automated match to d4csta_
        complexed with 8l8, ni, so4
      2. 2364026Domain d5aalb_: 5aal B: [313088]
        automated match to d4csta_
        complexed with 8l8, ni, so4
    5. Domain for 5aap:
    6. Domains for 5abz:
      1. 2364023Domain d5abza_: 5abz A: [313051]
        automated match to d4csta_
        complexed with ni, z47
      2. 2364024Domain d5abzb_: 5abz B: [313048]
        automated match to d4csta_
        complexed with ni, z47
    7. Domain for 5fs5:
    8. Domains for 5fwr:
      1. 2364015Domain d5fwra_: 5fwr A: [326642]
        automated match to d4csta_
        complexed with 3x8; mutant
      2. 2364016Domain d5fwrb_: 5fwr B: [326643]
        automated match to d4csta_
        complexed with 3x8; mutant
      3. 2364017Domain d5fwrc_: 5fwr C: [326684]
        automated match to d4csta_
        complexed with 3x8; mutant
      4. 2364018Domain d5fwrd_: 5fwr D: [326663]
        automated match to d4csta_
        complexed with 3x8; mutant
      5. 2364019Domain d5fwre_: 5fwr E: [326722]
        automated match to d4csta_
        complexed with 3x8; mutant
      6. 2364020Domain d5fwrf_: 5fwr F: [326707]
        automated match to d4csta_
        complexed with 3x8; mutant
      7. 2364021Domain d5fwrg_: 5fwr G: [326782]
        automated match to d4csta_
        complexed with 3x8; mutant
      8. 2364022Domain d5fwrh_: 5fwr H: [326625]
        automated match to d4csta_
        complexed with 3x8; mutant
    9. Domain for 5fx3:
    10. Domains for 5muc:
      1. 3046470Domain d5mucb_: 5muc B: [346532]
        automated match to d5ab1a_
        complexed with ah2
      2. 3046482Domain d5muca_: 5muc A: [346544]
        automated match to d5ab1a_
        complexed with ah2
  6. 2364035Salmonella enterica [TaxId:28901] [187562] (1 PDB entry)
  7. 2364037Salmonella typhimurium [TaxId:90371] [187560] (4 PDB entries)
    1. Domain for 2cny:
    2. Domain for 2cnz:
    3. Domain for 2co1:
    4. Domain for 2co4:
  8. 2364042Salmonella typhimurium [TaxId:99287] [187563] (2 PDB entries)
    1. Domain for 2co3:
    2. Domain for 2co6:
  9. 2364045Yersinia pestis [TaxId:632] [188957] (3 PDB entries)
    1. Domains for 3dos:
      1. 2364052Domain d3dosb_: 3dos B: [174099]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      2. 2364053Domain d3dosc_: 3dos C: [174100]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      3. 2364054Domain d3dose_: 3dos E: [174101]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      4. 2364055Domain d3dosf_: 3dos F: [174102]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
    2. Domains for 3dpb:
      1. 2364046Domain d3dpbb_: 3dpb B: [174148]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
      2. 2364047Domain d3dpbc_: 3dpb C: [174149]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
    3. Domains for 3dsn:
      1. 2364048Domain d3dsnb_: 3dsn B: [174212]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      2. 2364049Domain d3dsnc_: 3dsn C: [174213]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      3. 2364050Domain d3dsne_: 3dsn E: [174214]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      4. 2364051Domain d3dsnf_: 3dsn F: [174215]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant

More info for Protein automated matches from b.2.3.2: Pilus subunits

Timeline for Protein automated matches from b.2.3.2: Pilus subunits: