Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2767182Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2767438Superfamily b.2.3: Bacterial adhesins [49401] (7 families) (S)
  5. 2767443Family b.2.3.2: Pilus subunits [49405] (11 proteins)
  6. 2767660Protein automated matches [190569] (9 species)
    not a true protein

Species:

  1. 2767661Escherichia coli [TaxId:362663] [311670] (2 PDB entries)
    1. Domains for 4xoc:
      1. 2767662Domain d4xoca_: 4xoc A: [311671]
        automated match to d4csta_
        complexed with kgm
      2. 2767663Domain d4xocb_: 4xoc B: [311690]
        automated match to d4csta_
        complexed with kgm
    2. Domains for 4xoe:
      1. 2767664Domain d4xoea1: 4xoe A:1-158 [311854]
        automated match to d3zl2a_
        complexed with cac, kgm
      2. 2767665Domain d4xoea2: 4xoe A:159-279 [311855]
        automated match to d1klfb2
        complexed with cac, kgm
  2. 2767666Escherichia coli [TaxId:364106] [234099] (1 PDB entry)
  3. 2767668Escherichia coli [TaxId:488477] [232652] (2 PDB entries)
    1. Domains for 3jwn:
      1. 2767673Domain d3jwnh1: 3jwn H:1-158 [232653]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2, d3jwnk_, d3jwnl_
        automated match to d4av5a_
        complexed with gol
      2. 2767674Domain d3jwnh2: 3jwn H:159-279 [232654]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2, d3jwnk_, d3jwnl_
        automated match to d1ze3h1
        complexed with gol
      3. 2767675Domain d3jwnn1: 3jwn N:1-158 [232655]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2, d3jwnk_, d3jwnl_
        automated match to d4av5a_
        complexed with gol
      4. 2767676Domain d3jwnn2: 3jwn N:159-279 [232656]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwne_, d3jwnf_, d3jwni1, d3jwni2, d3jwnk_, d3jwnl_
        automated match to d1ze3h1
        complexed with gol
    2. Domains for 6gtw:
      1. 2767669Domain d6gtwa_: 6gtw A: [362141]
        automated match to d4xocb_
        complexed with ca
      2. 2767670Domain d6gtwb_: 6gtw B: [362146]
        automated match to d4xocb_
        complexed with ca
      3. 2767671Domain d6gtwc_: 6gtw C: [362147]
        automated match to d4xocb_
        complexed with ca
      4. 2767672Domain d6gtwd_: 6gtw D: [362197]
        automated match to d4xocb_
        complexed with ca
  4. 2767677Escherichia coli [TaxId:562] [188033] (6 PDB entries)
    1. Domains for 1tr7:
      1. 2767682Domain d1tr7a_: 1tr7 A: [119328]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
      2. 2767683Domain d1tr7b_: 1tr7 B: [119329]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
    2. Domain for 2uy6:
    3. Domains for 2uy7:
      1. 2767685Domain d2uy7d_: 2uy7 D: [145765]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      2. 2767686Domain d2uy7f_: 2uy7 F: [145766]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      3. 2767687Domain d2uy7h_: 2uy7 H: [145767]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
    4. Domains for 3rfz:
      1. 2767688Domain d3rfza1: 3rfz A:1-158 [233447]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d4av5a_
        complexed with so4
      2. 2767689Domain d3rfza2: 3rfz A:159-279 [233448]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d1ze3h1
        complexed with so4
      3. 2767690Domain d3rfzd1: 3rfz D:1-158 [239693]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza1
        complexed with so4
      4. 2767691Domain d3rfzd2: 3rfz D:159-279 [239694]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza2
        complexed with so4
    5. Domains for 4xod:
      1. 2767678Domain d4xoda1: 4xod A:1-158 [311749]
        automated match to d3zl2a_
      2. 2767679Domain d4xoda2: 4xod A:159-279 [311750]
        automated match to d1klfb2
    6. Domains for 6yhw:
      1. 2767680Domain d6yhwa_: 6yhw A: [385245]
        automated match to d3zl2a_
        complexed with glc, hp6, man, ta5
      2. 2767681Domain d6yhwb_: 6yhw B: [385236]
        automated match to d3zl2a_
        complexed with glc, hp6, man, ta5
  5. 2767692Escherichia coli [TaxId:83333] [269237] (7 PDB entries)
    1. Domain for 4css:
    2. Domain for 4cst:
    3. Domains for 4xob:
      1. 2767697Domain d4xoba1: 4xob A:1-158 [311863]
        automated match to d3zl2a_
        complexed with kgm, so4
      2. 2767698Domain d4xoba2: 4xob A:159-279 [311864]
        automated match to d1klfb2
        complexed with kgm, so4
      3. 2767699Domain d4xobc1: 4xob C:1-158 [311758]
        automated match to d3zl2a_
        complexed with kgm, so4
      4. 2767700Domain d4xobc2: 4xob C:159-279 [311759]
        automated match to d1klfb2
        complexed with kgm, so4
      5. 2767701Domain d4xobe1: 4xob E:1-158 [311919]
        automated match to d3zl2a_
        complexed with kgm, so4
      6. 2767702Domain d4xobe2: 4xob E:159-279 [311920]
        automated match to d1klfb2
        complexed with kgm, so4
      7. 2767703Domain d4xobg1: 4xob G:1-158 [311647]
        automated match to d3zl2a_
        complexed with kgm, so4
      8. 2767704Domain d4xobg2: 4xob G:159-279 [311648]
        automated match to d1klfb2
        complexed with kgm, so4
    4. Domains for 5aal:
      1. 2767707Domain d5aala_: 5aal A: [312478]
        automated match to d4csta_
        complexed with 8l8, ni, so4
      2. 2767708Domain d5aalb_: 5aal B: [313088]
        automated match to d4csta_
        complexed with 8l8, ni, so4
    5. Domain for 5aap:
    6. Domains for 5abz:
      1. 2767705Domain d5abza_: 5abz A: [313051]
        automated match to d4csta_
        complexed with ni, z47
      2. 2767706Domain d5abzb_: 5abz B: [313048]
        automated match to d4csta_
        complexed with ni, z47
    7. Domain for 5fs5:
  6. 2767709Salmonella enterica [TaxId:28901] [187562] (1 PDB entry)
  7. 2767711Salmonella typhimurium [TaxId:90371] [187560] (4 PDB entries)
    1. Domain for 2cny:
    2. Domain for 2cnz:
    3. Domain for 2co1:
    4. Domain for 2co4:
  8. 2767716Salmonella typhimurium [TaxId:99287] [187563] (2 PDB entries)
    1. Domain for 2co3:
    2. Domain for 2co6:
  9. 2767719Yersinia pestis [TaxId:632] [188957] (3 PDB entries)
    1. Domains for 3dos:
      1. 2767726Domain d3dosb_: 3dos B: [174099]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      2. 2767727Domain d3dosc_: 3dos C: [174100]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      3. 2767728Domain d3dose_: 3dos E: [174101]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      4. 2767729Domain d3dosf_: 3dos F: [174102]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
    2. Domains for 3dpb:
      1. 2767720Domain d3dpbb_: 3dpb B: [174148]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
      2. 2767721Domain d3dpbc_: 3dpb C: [174149]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
    3. Domains for 3dsn:
      1. 2767722Domain d3dsnb_: 3dsn B: [174212]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      2. 2767723Domain d3dsnc_: 3dsn C: [174213]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      3. 2767724Domain d3dsne_: 3dsn E: [174214]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      4. 2767725Domain d3dsnf_: 3dsn F: [174215]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant

More info for Protein automated matches from b.2.3.2: Pilus subunits

Timeline for Protein automated matches from b.2.3.2: Pilus subunits: