Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2033752Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2033932Superfamily b.2.3: Bacterial adhesins [49401] (7 families) (S)
  5. 2033937Family b.2.3.2: Pilus subunits [49405] (10 protein domains)
  6. 2034079Protein automated matches [190569] (10 species)
    not a true protein

Species:

  1. 2034080Escherichia coli [TaxId:364106] [234099] (1 PDB entry)
  2. 2034082Escherichia coli [TaxId:488477] [232652] (1 PDB entry)
  3. 2034087Escherichia coli [TaxId:562] [188033] (6 PDB entries)
    1. Domains for 1tr7:
      1. 2034088Domain d1tr7a_: 1tr7 A: [119328]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
      2. 2034089Domain d1tr7b_: 1tr7 B: [119329]
        automated match to d1uwfa1
        complexed with cac, deg, mpd
    2. Domain for 2uy6:
    3. Domains for 2uy7:
      1. 2034091Domain d2uy7d_: 2uy7 D: [145765]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      2. 2034092Domain d2uy7f_: 2uy7 F: [145766]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
      3. 2034093Domain d2uy7h_: 2uy7 H: [145767]
        Other proteins in same PDB: d2uy7a1, d2uy7a2, d2uy7b1, d2uy7c1, d2uy7c2, d2uy7e1, d2uy7e2, d2uy7g1, d2uy7g2
        automated match to d2uy7b1
        complexed with so4
    4. Domains for 3rfz:
      1. 2034094Domain d3rfza1: 3rfz A:1-158 [233447]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d4av5a_
        complexed with so4
      2. 2034095Domain d3rfza2: 3rfz A:159-279 [233448]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d1ze3h1
        complexed with so4
      3. 2034096Domain d3rfzd1: 3rfz D:1-158 [239693]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza1
        complexed with so4
      4. 2034097Domain d3rfzd2: 3rfz D:159-279 [239694]
        Other proteins in same PDB: d3rfzc1, d3rfzc2, d3rfzf1, d3rfzf2
        automated match to d3rfza2
        complexed with so4
    5. Domains for 4xod:
      1. 2268443Domain d4xoda1: 4xod A:1-158 [311749]
        automated match to d3zl2a_
      2. 2268444Domain d4xoda2: 4xod A:159-279 [311750]
        automated match to d1klfb2
    6. Domains for 5ab1:
      1. 2273872Domain d5ab1b_: 5ab1 B: [317173]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
      2. 2273883Domain d5ab1a_: 5ab1 A: [317184]
        automated match to d3zl2a_
        complexed with bcd, hp6, man, ta5
  4. 2034098Escherichia coli [TaxId:83333] [269237] (19 PDB entries)
    1. Domain for 4css:
    2. Domain for 4cst:
    3. Domains for 4xo8:
      1. 2268331Domain d4xo8a_: 4xo8 A: [311637]
        automated match to d4csta_
        complexed with kgm
      2. 2268335Domain d4xo8b_: 4xo8 B: [311641]
        automated match to d4csta_
        complexed with kgm
    4. Domains for 4xob:
      1. 2268341Domain d4xobg1: 4xob G:1-158 [311647]
        automated match to d3zl2a_
        complexed with kgm, so4
      2. 2268342Domain d4xobg2: 4xob G:159-279 [311648]
        automated match to d1klfb2
        complexed with kgm, so4
      3. 2268452Domain d4xobc1: 4xob C:1-158 [311758]
        automated match to d3zl2a_
        complexed with kgm, so4
      4. 2268453Domain d4xobc2: 4xob C:159-279 [311759]
        automated match to d1klfb2
        complexed with kgm, so4
      5. 2268557Domain d4xoba1: 4xob A:1-158 [311863]
        automated match to d3zl2a_
        complexed with kgm, so4
      6. 2268558Domain d4xoba2: 4xob A:159-279 [311864]
        automated match to d1klfb2
        complexed with kgm, so4
      7. 2268613Domain d4xobe1: 4xob E:1-158 [311919]
        automated match to d3zl2a_
        complexed with kgm, so4
      8. 2268614Domain d4xobe2: 4xob E:159-279 [311920]
        automated match to d1klfb2
        complexed with kgm, so4
    5. Domains for 5aal:
      1. 2269172Domain d5aala_: 5aal A: [312478]
        automated match to d4csta_
        complexed with 8l8, ni, so4
      2. 2269783Domain d5aalb_: 5aal B: [313088]
        automated match to d4csta_
        complexed with 8l8, ni, so4
    6. Domain for 5aap:
    7. Domains for 5abz:
      1. 2269743Domain d5abzb_: 5abz B: [313048]
        automated match to d4csta_
        complexed with ni, z47
      2. 2269746Domain d5abza_: 5abz A: [313051]
        automated match to d4csta_
        complexed with ni, z47
    8. Domains for 5cgb:
      1. 2276381Domain d5cgba_: 5cgb A: [319682]
        automated match to d4csta_
        complexed with 51c, so4
      2. 2276388Domain d5cgbb_: 5cgb B: [319689]
        automated match to d4csta_
        complexed with 51c, so4
    9. Domain for 5fs5:
    10. Domains for 5fwr:
      1. 2283324Domain d5fwrh_: 5fwr H: [326625]
        automated match to d4csta_
        complexed with 3x8; mutant
      2. 2283341Domain d5fwra_: 5fwr A: [326642]
        automated match to d4csta_
        complexed with 3x8; mutant
      3. 2283342Domain d5fwrb_: 5fwr B: [326643]
        automated match to d4csta_
        complexed with 3x8; mutant
      4. 2283362Domain d5fwrd_: 5fwr D: [326663]
        automated match to d4csta_
        complexed with 3x8; mutant
      5. 2283383Domain d5fwrc_: 5fwr C: [326684]
        automated match to d4csta_
        complexed with 3x8; mutant
      6. 2283406Domain d5fwrf_: 5fwr F: [326707]
        automated match to d4csta_
        complexed with 3x8; mutant
      7. 2283421Domain d5fwre_: 5fwr E: [326722]
        automated match to d4csta_
        complexed with 3x8; mutant
      8. 2283481Domain d5fwrg_: 5fwr G: [326782]
        automated match to d4csta_
        complexed with 3x8; mutant
    11. Domain for 5fx3:
    12. Domains for 5jcq:
      1. 2290795Domain d5jcqa_: 5jcq A: [334096]
        automated match to d4csta_
        complexed with mma, so4
      2. 2290837Domain d5jcqb_: 5jcq B: [334138]
        automated match to d4csta_
        complexed with mma, so4
    13. Domains for 5jcr:
      1. 2290789Domain d5jcrb_: 5jcr B: [334089]
        automated match to d4csta_
        complexed with mma
      2. 2290828Domain d5jcra_: 5jcr A: [334129]
        automated match to d4csta_
        complexed with mma
    14. Domains for 5l4t:
      1. 2292299Domain d5l4tb_: 5l4t B: [335600]
        automated match to d4csta_
        complexed with 6ls
      2. 2292328Domain d5l4ta_: 5l4t A: [335629]
        automated match to d4csta_
        complexed with 6ls
    15. Domains for 5l4u:
      1. 2292401Domain d5l4ua_: 5l4u A: [335702]
        automated match to d4csta_
        complexed with 6ks
      2. 2292617Domain d5l4ub_: 5l4u B: [335918]
        automated match to d4csta_
        complexed with 6ks
    16. Domains for 5l4v:
      1. 2292301Domain d5l4vc_: 5l4v C: [335602]
        automated match to d4csta_
        complexed with 6kw
      2. 2292330Domain d5l4vb_: 5l4v B: [335631]
        automated match to d4csta_
        complexed with 6kw
      3. 2292331Domain d5l4va_: 5l4v A: [335632]
        automated match to d4csta_
        complexed with 6kw
    17. Domains for 5l4w:
      1. 2292385Domain d5l4wc_: 5l4w C: [335686]
        automated match to d4csta_
        complexed with 6kh
      2. 2292411Domain d5l4wa_: 5l4w A: [335712]
        automated match to d4csta_
        complexed with 6kh
      3. 2292476Domain d5l4wb_: 5l4w B: [335777]
        automated match to d4csta_
        complexed with 6kh
    18. Domains for 5l4x:
      1. 2292323Domain d5l4xb_: 5l4x B: [335624]
        automated match to d4csta_
        complexed with 6ku
      2. 2292361Domain d5l4xa_: 5l4x A: [335662]
        automated match to d4csta_
        complexed with 6ku
    19. Domains for 5l4y:
      1. 2292309Domain d5l4ya_: 5l4y A: [335610]
        automated match to d4csta_
        complexed with 6k3
      2. 2292310Domain d5l4yb_: 5l4y B: [335611]
        automated match to d4csta_
        complexed with 6k3
  5. 2034101Salmonella enterica [TaxId:28901] [187562] (1 PDB entry)
  6. 2034103Salmonella typhimurium [TaxId:90371] [187560] (4 PDB entries)
    1. Domain for 2cny:
    2. Domain for 2cnz:
    3. Domain for 2co1:
    4. Domain for 2co4:
  7. 2034108Salmonella typhimurium [TaxId:99287] [187563] (2 PDB entries)
    1. Domain for 2co3:
    2. Domain for 2co6:
  8. 2034111Yersinia pestis [TaxId:632] [188957] (3 PDB entries)
    1. Domains for 3dos:
      1. 2034118Domain d3dosb_: 3dos B: [174099]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      2. 2034119Domain d3dosc_: 3dos C: [174100]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      3. 2034120Domain d3dose_: 3dos E: [174101]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
      4. 2034121Domain d3dosf_: 3dos F: [174102]
        Other proteins in same PDB: d3dosa1, d3dosa2, d3dosd1, d3dosd2
        automated match to d1p5ub_
        mutant
    2. Domains for 3dpb:
      1. 2034112Domain d3dpbb_: 3dpb B: [174148]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
      2. 2034113Domain d3dpbc_: 3dpb C: [174149]
        Other proteins in same PDB: d3dpba1, d3dpba2
        automated match to d1p5ub_
        mutant
    3. Domains for 3dsn:
      1. 2034114Domain d3dsnb_: 3dsn B: [174212]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      2. 2034115Domain d3dsnc_: 3dsn C: [174213]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      3. 2034116Domain d3dsne_: 3dsn E: [174214]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
      4. 2034117Domain d3dsnf_: 3dsn F: [174215]
        Other proteins in same PDB: d3dsna1, d3dsna2, d3dsnd1, d3dsnd2
        automated match to d1p5ub_
        mutant
  9. 2268364Escherichia coli [TaxId:362663] [311670] (2 PDB entries)
    1. Domains for 4xoc:
      1. 2268365Domain d4xoca_: 4xoc A: [311671]
        automated match to d4csta_
        complexed with kgm
      2. 2268384Domain d4xocb_: 4xoc B: [311690]
        automated match to d4csta_
        complexed with kgm
    2. Domains for 4xoe:
      1. 2268548Domain d4xoea1: 4xoe A:1-158 [311854]
        automated match to d3zl2a_
        complexed with cac, kgm
      2. 2268549Domain d4xoea2: 4xoe A:159-279 [311855]
        automated match to d1klfb2
        complexed with cac, kgm
  10. 2273653Escherichia coli [TaxId:1206108] [316954] (2 PDB entries)
    1. Domain for 5f2f:
    2. Domain for 5f3f:

More info for Protein automated matches from b.2.3.2: Pilus subunits

Timeline for Protein automated matches from b.2.3.2: Pilus subunits: