SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)
Fold b.69: 7-bladed beta-propeller [50964] (14 superfamilies)
consists of seven 4-stranded beta-sheet motifs; meander
Superfamily b.69.4: WD40 repeat-like [50978] (4 families)
also contains 8-bladed propellers
Family b.69.4.0: automated matches [191412] (1 protein)
not a true family
Protein automated matches [190568] (5 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [267834] (2 PDB entries)
1. Domains for 3frx:
  1. Domain d3frxa_: 3frx A: [264797]
    automated match to d4aowa_
    complexed with mn
  2. Domain d3frxb_: 3frx B: [264798]
    automated match to d4aowa_
    complexed with mn
  3. Domain d3frxc_: 3frx C: [264799]
    automated match to d4aowa_
    complexed with mn
  4. Domain d3frxd_: 3frx D: [264800]
    automated match to d4aowa_
    complexed with mn
2. Domains for 4bh6:
  1. Domain d4bh6a_: 4bh6 A: [265930]
    automated match to d4n14a_
  2. Domain d4bh6b_: 4bh6 B: [265931]
    automated match to d4n14a_
  3. Domain d4bh6c_: 4bh6 C: [265932]
    automated match to d4n14a_
  4. Domain d4bh6d_: 4bh6 D: [265933]
    automated match to d4n14a_
  5. Domain d4bh6e_: 4bh6 E: [265934]
    automated match to d4n14a_
  6. Domain d4bh6f_: 4bh6 F: [265935]
    automated match to d4n14a_
  7. Domain d4bh6g_: 4bh6 G: [265936]
    automated match to d4n14a_
  8. Domain d4bh6h_: 4bh6 H: [265937]
    automated match to d4n14a_
Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [267880] (1 PDB entry)
- Domains for 3rfh:
  1. Domain d3rfha_: 3rfh A: [265318]
    automated match to d4aowa_
  2. Domain d3rfhb_: 3rfh B: [265319]
    automated match to d4aowa_
  3. Domain d3rfhc_: 3rfh C: [265320]
    automated match to d4aowa_
  4. Domain d3rfhd_: 3rfh D: [265321]
    automated match to d4aowa_
Human (Homo sapiens) [TaxId:9606] [187559] (43 PDB entries)
1. Domain for 2cnx:
  - Domain d2cnxa_: 2cnx A: [163458]
    automated match to d1vyhc1
2. Domains for 2co0:
  1. Domain d2co0a_: 2co0 A: [163459]
    automated match to d1vyhc1
  2. Domain d2co0c_: 2co0 C: [163460]
    automated match to d1vyhc1
3. Domains for 2g99:
  1. Domain d2g99a_: 2g99 A: [164607]
    automated match to d1vyhc1
    protein/DNA complex
  2. Domain d2g99b_: 2g99 B: [164608]
    automated match to d1vyhc1
    protein/DNA complex
4. Domain for 2g9a:
  - Domain d2g9aa_: 2g9a A: [164609]
    automated match to d1vyhc1
    protein/DNA complex
5. Domain for 2gnq:
  - Domain d2gnqa_: 2gnq A: [204429]
    automated match to d2cnxa_
    complexed with cl
6. Domain for 2h13:
  - Domain d2h13a_: 2h13 A: [164902]
    automated match to d1vyhc1
7. Domain for 2h14:
  - Domain d2h14a_: 2h14 A: [164903]
    automated match to d1vyhc1
8. Domains for 2h68:
  1. Domain d2h68a_: 2h68 A: [164958]
    automated match to d1vyhc1
  2. Domain d2h68b_: 2h68 B: [164959]
    automated match to d1vyhc1
9. Domains for 2h6k:
  1. Domain d2h6ka_: 2h6k A: [164960]
    automated match to d1vyhc1
  2. Domain d2h6kb_: 2h6k B: [164961]
    automated match to d1vyhc1
10. Domains for 2h6n:
  1. Domain d2h6na_: 2h6n A: [164962]
    automated match to d1vyhc1
  2. Domain d2h6nb_: 2h6n B: [164963]
    automated match to d1vyhc1
11. Domains for 2h6q:
  1. Domain d2h6qa_: 2h6q A: [164964]
    automated match to d1vyhc1
  2. Domain d2h6qb_: 2h6q B: [164965]
    automated match to d1vyhc1
12. Domain for 2h9l:
  - Domain d2h9la_: 2h9l A: [204530]
    automated match to d2cnxa_
    complexed with so4
13. Domains for 2h9m:
  1. Domain d2h9ma_: 2h9m A: [165021]
    automated match to d1vyhc1
  2. Domain d2h9mc_: 2h9m C: [165022]
    automated match to d1vyhc1
14. Domains for 2h9n:
  1. Domain d2h9na_: 2h9n A: [165023]
    automated match to d1vyhc1
  2. Domain d2h9nc_: 2h9n C: [165024]
    automated match to d1vyhc1
15. Domains for 2o9k:
  1. Domain d2o9ka_: 2o9k A: [166592]
    automated match to d1vyhc1
  2. Domain d2o9kc_: 2o9k C: [166593]
    automated match to d1vyhc1
16. Domain for 3eg6:
  - Domain d3eg6a_: 3eg6 A: [174919]
    automated match to d1vyhc1
    complexed with so4
17. Domain for 3emh:
  - Domain d3emha_: 3emh A: [175087]
    automated match to d1vyhc1
    complexed with so4
18. Domain for 3mxx:
  - Domain d3mxxa_: 3mxx A: [181688]
    automated match to d1vyhc1
    mutant
19. Domain for 3n0d:
  - Domain d3n0da_: 3n0d A: [181751]
    automated match to d1vyhc1
    mutant
20. Domain for 3n0e:
  - Domain d3n0ea_: 3n0e A: [181752]
    automated match to d1vyhc1
    mutant
21. Domain for 3p4f:
  - Domain d3p4fa_: 3p4f A: [183497]
    automated match to d1vyhc1
22. Domains for 3psl:
  1. Domain d3psla_: 3psl A: [183954]
    automated match to d1vyhc1
  2. Domain d3pslb_: 3psl B: [183955]
    automated match to d1vyhc1
23. Domains for 3smr:
  1. Domain d3smra_: 3smr A: [216486]
    automated match to d3ur4a_
    complexed with edo, np7, unx
  2. Domain d3smrb_: 3smr B: [216487]
    automated match to d3ur4a_
    complexed with edo, np7, unx
  3. Domain d3smrc_: 3smr C: [216488]
    automated match to d3ur4a_
    complexed with edo, np7, unx
  4. Domain d3smrd_: 3smr D: [216489]
    automated match to d3ur4a_
    complexed with edo, np7, unx
24. Domains for 3ur4:
  1. Domain d3ur4a_: 3ur4 A: [186376]
    automated match to d1vyhc1
    complexed with 0bw, cl, edo, so4, unx
  2. Domain d3ur4b_: 3ur4 B: [186377]
    automated match to d1vyhc1
    complexed with 0bw, cl, edo, so4, unx
25. Domain for 3uvk:
  - Domain d3uvka_: 3uvk A: [186420]
    automated match to d1vyhc1
    complexed with btb, so4
26. Domain for 3uvl:
  - Domain d3uvla_: 3uvl A: [186421]
    automated match to d1vyhc1
27. Domain for 3uvm:
  - Domain d3uvma_: 3uvm A: [186422]
    automated match to d1vyhc1
28. Domain for 3uvo:
  - Domain d3uvoa_: 3uvo A: [186423]
    automated match to d1vyhc1
29. Domain for 4a7j:
  - Domain d4a7ja_: 4a7j A: [186735]
    automated match to d1vyhc1
30. Domain for 4gga:
  - Domain d4ggaa_: 4gga A: [252211]
    automated match to d2gnqa_
31. Domain for 4ggc:
  - Domain d4ggca_: 4ggc A: [266295]
    automated match to d4ggaa_
    complexed with mrd
32. Domains for 4gm8:
  1. Domain d4gm8a_: 4gm8 A: [234482]
    automated match to d2h9la_
  2. Domain d4gm8b_: 4gm8 B: [234483]
    automated match to d2h9la_
  3. Domain d4gm8c_: 4gm8 C: [234484]
    automated match to d2h9la_
  4. Domain d4gm8d_: 4gm8 D: [234485]
    automated match to d2h9la_
33. Domains for 4gm9:
  1. Domain d4gm9a_: 4gm9 A: [236990]
    automated match to d4gm8c_
  2. Domain d4gm9b_: 4gm9 B: [236992]
    automated match to d4gm8c_
34. Domain for 4gmb:
  - Domain d4gmba_: 4gmb A: [236991]
    automated match to d4gm8c_
35. Domain for 4ia9:
  - Domain d4ia9a_: 4ia9 A: [223086]
    automated match to d3ur4a_
    complexed with edo, ia9, unx
36. Domain for 4n14:
  - Domain d4n14a_: 4n14 A: [259078]
    automated match to d4ggaa_
    complexed with wr7
37. Domains for 4ql1:
  1. Domain d4ql1a_: 4ql1 A: [261916]
    automated match to d2h9la_
    complexed with 35q, edo, gol, unx
  2. Domain d4ql1b_: 4ql1 B: [261917]
    automated match to d2h9la_
    complexed with 35q, edo, gol, unx
38. Domain for 4qqe:
  - Domain d4qqea_: 4qqe A: [258500]
    automated match to d2h9la_
    complexed with 37f, cl, edo, unx
39. Domain for 4yvd:
  - Domain d4yvda_: 4yvd A: [271596]
    automated match to d2h9la_
    complexed with cl, na, unx
40. Domains for 5eal:
  1. Domain d5eala_: 5eal A: [278977]
    automated match to d2h9la_
    complexed with 5ml, cl, edo, gol, unx
  2. Domain d5ealb_: 5eal B: [278978]
    automated match to d2h9la_
    complexed with 5ml, cl, edo, gol, unx
41. Domains for 5eam:
  1. Domain d5eama_: 5eam A: [278972]
    automated match to d2h9la_
    complexed with 5mn, btb, edo, so4, unx
  2. Domain d5eamb_: 5eam B: [278975]
    automated match to d2h9la_
    complexed with 5mn, btb, edo, so4, unx
42. Domain for 5eap:
  - Domain d5eapa_: 5eap A: [278976]
    automated match to d2h9la_
    complexed with 5mo, cl, edo, gol, unx
43. Domains for 5ear:
  1. Domain d5eara_: 5ear A: [278973]
    automated match to d2h9la_
    complexed with 5mq, edo, so4, unx
  2. Domain d5earb_: 5ear B: [278974]
    automated match to d2h9la_
    complexed with 5mq, edo, so4, unx
Mouse (Mus musculus) [TaxId:10090] [188331] (1 PDB entry)
- Domains for 2pbi:
  1. Domain d2pbib_: 2pbi B: [167111]
    automated match to d1a0rb_
    complexed with gol
  2. Domain d2pbid_: 2pbi D: [167112]
    automated match to d1a0rb_
    complexed with gol
Nostoc punctiforme [TaxId:272131] [255705] (1 PDB entry)
- Domains for 2ymu:
  1. Domain d2ymua1: 2ymu A:1-290 [244785]
    automated match to d1p22a2
  2. Domain d2ymua2: 2ymu A:291-577 [244786]
    automated match to d1p22a2
  3. Domain d2ymub1: 2ymu B:1-290 [244787]
    automated match to d1p22a2
  4. Domain d2ymub2: 2ymu B:291-577 [244788]
    automated match to d1p22a2

More info for Protein automated matches from b.69.4.0: automated matches

Timeline for Protein automated matches from b.69.4.0: automated matches:

Protein automated matches from b.69.4.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from b.69.4.0: automated matches appears in SCOPe 2.04
Protein automated matches from b.69.4.0: automated matches appears in SCOPe 2.06
Protein automated matches from b.69.4.0: automated matches appears in the current release, SCOPe 2.08