Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2772794Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 2772795Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (4 families) (S)
    two constituent families are related by circular permutation
  5. 2772796Family b.7.1.1: PLC-like (P variant) [49563] (12 proteins)
  6. 2772932Protein automated matches [190564] (3 species)
    not a true protein

Species:

  1. 2772933Chicken (Gallus gallus) [TaxId:9031] [369124] (1 PDB entry)
  2. 2772937Human (Homo sapiens) [TaxId:9606] [188151] (4 PDB entries)
    1. Domain for 1yrk:
    2. Domains for 5bug:
      1. 2772943Domain d5buga2: 5bug A:188-351 [277818]
        Other proteins in same PDB: d5buga1, d5bugb1, d5bugc1, d5bugd1
        automated match to d1d5ra1
        complexed with tla
      2. 2772944Domain d5bugb2: 5bug B:188-351 [277817]
        Other proteins in same PDB: d5buga1, d5bugb1, d5bugc1, d5bugd1
        automated match to d1d5ra1
        complexed with tla
      3. 2772945Domain d5bugc2: 5bug C:188-351 [277816]
        Other proteins in same PDB: d5buga1, d5bugb1, d5bugc1, d5bugd1
        automated match to d1d5ra1
        complexed with tla
      4. 2772946Domain d5bugd2: 5bug D:188-351 [277820]
        Other proteins in same PDB: d5buga1, d5bugb1, d5bugc1, d5bugd1
        automated match to d1d5ra1
        complexed with tla
    3. Domains for 5bzx:
      1. 2772947Domain d5bzxa2: 5bzx A:188-351 [277826]
        Other proteins in same PDB: d5bzxa1, d5bzxb1, d5bzxc1, d5bzxd1
        automated match to d1d5ra1
        complexed with tla, vo4
      2. 2772948Domain d5bzxb2: 5bzx B:188-351 [277822]
        Other proteins in same PDB: d5bzxa1, d5bzxb1, d5bzxc1, d5bzxd1
        automated match to d1d5ra1
        complexed with tla, vo4
      3. 2772949Domain d5bzxc2: 5bzx C:188-351 [277828]
        Other proteins in same PDB: d5bzxa1, d5bzxb1, d5bzxc1, d5bzxd1
        automated match to d1d5ra1
        complexed with tla, vo4
      4. 2772950Domain d5bzxd2: 5bzx D:188-351 [277825]
        Other proteins in same PDB: d5bzxa1, d5bzxb1, d5bzxc1, d5bzxd1
        automated match to d1d5ra1
        complexed with tla, vo4
    4. Domains for 5bzz:
      1. 2772939Domain d5bzza2: 5bzz A:188-351 [277830]
        Other proteins in same PDB: d5bzza1, d5bzzb1, d5bzzc1, d5bzzd1
        automated match to d1d5ra1
        complexed with tla
      2. 2772940Domain d5bzzb2: 5bzz B:188-351 [277832]
        Other proteins in same PDB: d5bzza1, d5bzzb1, d5bzzc1, d5bzzd1
        automated match to d1d5ra1
        complexed with tla
      3. 2772941Domain d5bzzc2: 5bzz C:188-351 [277836]
        Other proteins in same PDB: d5bzza1, d5bzzb1, d5bzzc1, d5bzzd1
        automated match to d1d5ra1
        complexed with tla
      4. 2772942Domain d5bzzd2: 5bzz D:188-351 [277837]
        Other proteins in same PDB: d5bzza1, d5bzzb1, d5bzzc1, d5bzzd1
        automated match to d1d5ra1
        complexed with tla
  3. 2772951Norway rat (Rattus norvegicus) [TaxId:10116] [187552] (2 PDB entries)
    1. Domain for 2cjs:
    2. Domains for 2cjt:
      1. 2772952Domain d2cjtb_: 2cjt B: [130550]
        Other proteins in same PDB: d2cjta1
        automated match to d2cjta1
        complexed with edo, fmt
      2. 2772953Domain d2cjtc_: 2cjt C: [130551]
        Other proteins in same PDB: d2cjta1
        automated match to d2cjta1
        complexed with edo, fmt
      3. 2772954Domain d2cjtd_: 2cjt D: [130552]
        Other proteins in same PDB: d2cjta1
        automated match to d2cjta1
        complexed with edo, fmt

More info for Protein automated matches from b.7.1.1: PLC-like (P variant)

Timeline for Protein automated matches from b.7.1.1: PLC-like (P variant):