Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1632226Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 1632227Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 1634020Family d.2.1.0: automated matches [191411] (1 protein)
    not a true family
  6. 1634021Protein automated matches [190563] (11 species)
    not a true protein

Species:

  1. 1634022Bryum coronatum [TaxId:216087] [237943] (2 PDB entries)
    1. Domain for 3wh1:
    2. Domain for 4ij4:
  2. 1634025House fly (Musca domestica) [TaxId:7370] [187696] (3 PDB entries)
    1. Domains for 2fbd:
      1. 1634026Domain d2fbda_: 2fbd A: [164320]
        automated match to d1gd6a_
        complexed with peg, so4
      2. 1634027Domain d2fbdb_: 2fbd B: [164321]
        automated match to d1gd6a_
        complexed with peg, so4
    2. Domains for 2h5z:
      1. 1634028Domain d2h5za_: 2h5z A: [164956]
        automated match to d1gd6a_
        complexed with cto
      2. 1634029Domain d2h5zb_: 2h5z B: [164957]
        automated match to d1gd6a_
        complexed with cto
    3. Domains for 3cb7:
      1. 1634030Domain d3cb7a_: 3cb7 A: [173114]
        automated match to d1gd6a_
        complexed with acy, gol, ipa
      2. 1634031Domain d3cb7b_: 3cb7 B: [173115]
        automated match to d1gd6a_
        complexed with acy, gol, ipa
  3. 1634032Human (Homo sapiens) [TaxId:9606] [228081] (1 PDB entry)
  4. 1634035Maize (Zea mays) [TaxId:4577] [237294] (1 PDB entry)
  5. 1634037Mouse (Mus musculus) [TaxId:10090] [187760] (1 PDB entry)
  6. 1634041Mycobacterium tuberculosis [TaxId:1773] [236519] (2 PDB entries)
    1. Domains for 4cge:
      1. 1634044Domain d4cgea_: 4cge A: [236523]
        automated match to d1xsfa1
      2. 1634045Domain d4cgeb_: 4cge B: [236522]
        automated match to d1xsfa1
      3. 1634046Domain d4cgec_: 4cge C: [236524]
        automated match to d1xsfa1
      4. 1634047Domain d4cged_: 4cge D: [236521]
        automated match to d1xsfa1
      5. 1634048Domain d4cgee_: 4cge E: [236525]
        automated match to d1xsfa1
      6. 1634049Domain d4cgef_: 4cge F: [236526]
        automated match to d1xsfa1
    2. Domains for 4ow1:
      1. 1634042Domain d4ow1a_: 4ow1 A: [257338]
        automated match to d4emna_
        complexed with edo
      2. 1634043Domain d4ow1s_: 4ow1 S: [258968]
        automated match to d4emna_
        complexed with edo
  7. 1634050Picea abies [TaxId:3329] [188984] (3 PDB entries)
    1. Domain for 3hbd:
    2. Domain for 3hbe:
    3. Domain for 3hbh:
  8. 1634054Silkworm (Bombyx mori) [TaxId:7091] [255591] (1 PDB entry)
  9. 1634056Staphylococcus aureus [TaxId:196620] [188997] (1 PDB entry)
  10. 1634058Streptomyces coelicolor [TaxId:1902] [187551] (1 PDB entry)
  11. 1634061Streptomyces griseus [TaxId:1911] [254952] (3 PDB entries)
    1. Domain for 1wvu:
    2. Domain for 1wvv:
    3. Domains for 2dbt:
      1. 1634064Domain d2dbta_: 2dbt A: [241547]
        automated match to d2cjla_
        complexed with epe
      2. 1634065Domain d2dbtb_: 2dbt B: [241548]
        automated match to d2cjla_
        complexed with epe
      3. 1634066Domain d2dbtc_: 2dbt C: [241549]
        automated match to d2cjla_
        complexed with epe

More info for Protein automated matches from d.2.1.0: automated matches

Timeline for Protein automated matches from d.2.1.0: automated matches: