Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2341926Fold a.204: all-alpha NTP pyrophosphatases [101385] (1 superfamily)
    multihelical: dimeric 4-helical bundle surrounded by other helices; oligomerizes further in a tetramer
  4. 2341927Superfamily a.204.1: all-alpha NTP pyrophosphatases [101386] (5 families) (S)
    basic module consist of 5 active site-forming helices; four from one subunit/structural repeat; the fifth from the other subunit/repeat
  5. 2342011Family a.204.1.0: automated matches [191410] (1 protein)
    not a true family
  6. 2342012Protein automated matches [190562] (4 species)
    not a true protein

Species:

  1. 2342013Archaeoglobus fulgidus [TaxId:2234] [189451] (2 PDB entries)
    1. Domains for 3obc:
      1. 2342014Domain d3obca1: 3obc A:1-100 [306108]
        Other proteins in same PDB: d3obca2, d3obcb2
        automated match to d4qgpa_
        complexed with cl, peg, pge, zn
      2. 2342015Domain d3obcb1: 3obc B:1-100 [306110]
        Other proteins in same PDB: d3obca2, d3obcb2
        automated match to d4qgpa_
        complexed with cl, peg, pge, zn
    2. Domains for 4qgp:
      1. 2342016Domain d4qgpa1: 4qgp A:1-100 [263702]
        Other proteins in same PDB: d4qgpa2, d4qgpb2
        complexed with cl, mg, na, pg4, pge
      2. 2342017Domain d4qgpb1: 4qgp B:1-100 [258357]
        Other proteins in same PDB: d4qgpa2, d4qgpb2
        automated match to d3obca_
        complexed with cl, mg, na, pg4, pge
  2. 2342018Leishmania major [TaxId:5664] [187550] (4 PDB entries)
    1. Domain for 2cje:
    2. Domain for 2yay:
    3. Domains for 2yaz:
      1. 2342025Domain d2yaza_: 2yaz A: [170712]
        automated match to d1ogla_
        complexed with mg, so4, ump
      2. 2342026Domain d2yazb_: 2yaz B: [170713]
        automated match to d1ogla_
        complexed with mg, so4, ump
      3. 2342027Domain d2yazd_: 2yaz D: [170714]
        automated match to d1ogla_
        complexed with mg, so4, ump
      4. 2342028Domain d2yaze_: 2yaz E: [170715]
        automated match to d1ogla_
        complexed with mg, so4, ump
    4. Domains for 2yb0:
      1. 2342020Domain d2yb0a_: 2yb0 A: [170716]
        automated match to d1ogla_
        complexed with dur, so4
      2. 2342021Domain d2yb0b_: 2yb0 B: [170717]
        automated match to d1ogla_
        complexed with dur, so4
      3. 2342022Domain d2yb0d_: 2yb0 D: [170718]
        automated match to d1ogla_
        complexed with dur, so4
      4. 2342023Domain d2yb0e_: 2yb0 E: [170719]
        automated match to d1ogla_
        complexed with dur, so4
  3. 2342029Trypanosome (Trypanosoma brucei) [TaxId:5691] [234324] (2 PDB entries)
    1. Domain for 4dk2:
    2. Domains for 4dk4:
      1. 2342031Domain d4dk4a_: 4dk4 A: [234325]
        automated match to d1ogla_
        complexed with ca, dun, na
      2. 2342032Domain d4dk4b_: 4dk4 B: [234326]
        automated match to d1ogla_
        complexed with ca, dun, na
  4. 2342033Vibrio sp. [TaxId:344879] [188224] (3 PDB entries)
    1. Domains for 2q5z:
      1. 2342038Domain d2q5za1: 2q5z A:1-92 [167433]
        Other proteins in same PDB: d2q5za2
        automated match to d1vmga_
        complexed with gol, mg
      2. 2342039Domain d2q5zb_: 2q5z B: [167434]
        Other proteins in same PDB: d2q5za2
        automated match to d1vmga_
        complexed with gol, mg
    2. Domains for 2q73:
      1. 2342034Domain d2q73a_: 2q73 A: [198279]
        automated match to d2q73d_
        complexed with mg
      2. 2342035Domain d2q73b_: 2q73 B: [198280]
        automated match to d2q73d_
        complexed with mg
      3. 2342036Domain d2q73c_: 2q73 C: [198281]
        automated match to d2q73d_
        complexed with mg
      4. 2342037Domain d2q73d_: 2q73 D: [194680]
        automated match to d2q5zb_
        complexed with mg
    3. Domains for 2q9l:
      1. 2342040Domain d2q9la_: 2q9l A: [205765]
        automated match to d2q73d_
        complexed with mg
      2. 2342041Domain d2q9lb_: 2q9l B: [205766]
        automated match to d2q73d_
        complexed with mg
      3. 2342042Domain d2q9lc_: 2q9l C: [205767]
        automated match to d2q73d_
        complexed with mg
      4. 2342043Domain d2q9ld_: 2q9l D: [205768]
        automated match to d2q73d_
        complexed with mg

More info for Protein automated matches from a.204.1.0: automated matches

Timeline for Protein automated matches from a.204.1.0: automated matches: