Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2161468Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 2161469Superfamily d.17.1: Cystatin/monellin [54403] (7 families) (S)
    has a additional strand at the N-terminus
  5. 2161622Family d.17.1.0: automated matches [191407] (1 protein)
    not a true family
  6. 2161623Protein automated matches [190558] (10 species)
    not a true protein

Species:

  1. 2161624Artificial gene [TaxId:32630] [238445] (2 PDB entries)
    1. Domain for 4n6t:
    2. Domain for 4n6u:
  2. 2161627Ascaris lumbricoides [TaxId:6252] [236403] (1 PDB entry)
  3. 2161632Colocasia esculenta [TaxId:4460] [189213] (1 PDB entry)
  4. 2161635Cowpea (Vigna unguiculata) [TaxId:3917] [278150] (1 PDB entry)
  5. 2161638Human (Homo sapiens) [TaxId:9606] [187545] (5 PDB entries)
    1. Domain for 2ch9:
    2. Domain for 4n6l:
    3. Domains for 4n6m:
      1. 2161643Domain d4n6ma_: 4n6m A: [269688]
        automated match to d1tija_
        complexed with so4
      2. 2161644Domain d4n6mb_: 4n6m B: [269684]
        automated match to d1tija_
        complexed with so4
    4. Domain for 4n6n:
    5. Domain for 4n6o:
  6. 2161645Ixodes scapularis [TaxId:6945] [255931] (3 PDB entries)
    1. Domain for 3lh4:
    2. Domain for 3mwz:
    3. Domains for 4zm8:
      1. 2161648Domain d4zm8a_: 4zm8 A: [274100]
        automated match to d3lh4a_
      2. 2161649Domain d4zm8b_: 4zm8 B: [274105]
        automated match to d3lh4a_
      3. 2161650Domain d4zm8c_: 4zm8 C: [274102]
        automated match to d3lh4a_
      4. 2161651Domain d4zm8d_: 4zm8 D: [274108]
        automated match to d3lh4a_
  7. 2161652Mouse (Mus musculus) [TaxId:10090] [230381] (1 PDB entry)
  8. 2161654Potato (Solanum tuberosum) [TaxId:4113] [225839] (3 PDB entries)
    1. Domains for 2w9p:
      1. 2161659Domain d2w9pa_: 2w9p A: [206720]
        automated match to d3imab_
      2. 2161660Domain d2w9pb_: 2w9p B: [206721]
        automated match to d3imab_
      3. 2161661Domain d2w9pc_: 2w9p C: [206722]
        automated match to d3imab_
      4. 2161662Domain d2w9pd_: 2w9p D: [206723]
        automated match to d3imab_
      5. 2161663Domain d2w9pe_: 2w9p E: [206724]
        automated match to d3imab_
      6. 2161664Domain d2w9pf_: 2w9p F: [206725]
        automated match to d3imab_
      7. 2161665Domain d2w9pg_: 2w9p G: [206726]
        automated match to d3imab_
      8. 2161666Domain d2w9ph_: 2w9p H: [206727]
        automated match to d3imab_
      9. 2161667Domain d2w9pi_: 2w9p I: [206728]
        automated match to d3imab_
      10. 2161668Domain d2w9pj_: 2w9p J: [206729]
        automated match to d3imab_
      11. 2161669Domain d2w9pk_: 2w9p K: [206730]
        automated match to d3imab_
      12. 2161670Domain d2w9pl_: 2w9p L: [206731]
        automated match to d3imab_
      13. 2161671Domain d2w9pm_: 2w9p M: [206732]
        automated match to d3imab_
      14. 2161672Domain d2w9pn_: 2w9p N: [206733]
        automated match to d3imab_
    2. Domain for 2w9q:
    3. Domains for 4lzi:
      1. 2161656Domain d4lzia1: 4lzi A:7-96 [253704]
        automated match to d3imad_
      2. 2161657Domain d4lzia2: 4lzi A:97-186 [253705]
        automated match to d3imad_
      3. 2161658Domain d4lzia3: 4lzi A:187-283 [253706]
        automated match to d3imad_
  9. 2161673Saccharum officinarum [TaxId:4547] [256120] (2 PDB entries)
    1. Domains for 3ul5:
      1. 2161674Domain d3ul5a_: 3ul5 A: [250226]
        automated match to d3imad_
        complexed with gol, na
      2. 2161675Domain d3ul5b_: 3ul5 B: [250227]
        automated match to d3imad_
        complexed with gol, na
      3. 2161676Domain d3ul5c_: 3ul5 C: [250228]
        automated match to d3imad_
        complexed with gol, na
      4. 2161677Domain d3ul5d_: 3ul5 D: [250229]
        automated match to d3imad_
        complexed with gol, na
    2. Domains for 3ul6:
      1. 2161678Domain d3ul6a_: 3ul6 A: [250230]
        automated match to d3imad_
        complexed with pe4
      2. 2161679Domain d3ul6b_: 3ul6 B: [250231]
        automated match to d3imad_
        complexed with pe4
  10. 2161680Soft tick (Ornithodoros moubata) [TaxId:6938] [267850] (1 PDB entry)

More info for Protein automated matches from d.17.1.0: automated matches

Timeline for Protein automated matches from d.17.1.0: automated matches: