SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families)
dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
Family d.58.4.17: SOR-like [143278] (2 proteins)
Pfam PF07682; duplication: consists of two similar domains
Protein automated matches [190550] (2 species)
not a true protein

Species:

Acidianus ambivalens [TaxId:2283] [187530] (4 PDB entries)
1. Domains for 2cb2:
  1. Domain d2cb2b_: 2cb2 B: [161398]
    Other proteins in same PDB: d2cb2a1
    automated match to d2cb2a1
    complexed with fe
  2. Domain d2cb2c_: 2cb2 C: [161399]
    Other proteins in same PDB: d2cb2a1
    automated match to d2cb2a1
    complexed with fe
  3. Domain d2cb2d_: 2cb2 D: [161400]
    Other proteins in same PDB: d2cb2a1
    automated match to d2cb2a1
    complexed with fe
  4. Domain d2cb2e_: 2cb2 E: [161401]
    Other proteins in same PDB: d2cb2a1
    automated match to d2cb2a1
    complexed with fe
  5. Domain d2cb2f_: 2cb2 F: [161402]
    Other proteins in same PDB: d2cb2a1
    automated match to d2cb2a1
    complexed with fe
2. Domains for 2yav:
  1. Domain d2yava_: 2yav A: [207503]
    automated match to d2yaxc_
    complexed with act, cl, fe, zn
  2. Domain d2yavb_: 2yav B: [207504]
    automated match to d2yaxc_
    complexed with act, cl, fe, zn
  3. Domain d2yavc_: 2yav C: [207505]
    automated match to d2yaxc_
    complexed with act, cl, fe, zn
  4. Domain d2yavd_: 2yav D: [207506]
    automated match to d2yaxc_
    complexed with act, cl, fe, zn
  5. Domain d2yave_: 2yav E: [207507]
    automated match to d2yaxc_
    complexed with act, cl, fe, zn
  6. Domain d2yavf_: 2yav F: [207508]
    automated match to d2yaxc_
    complexed with act, cl, fe, zn
3. Domains for 2yaw:
  1. Domain d2yawa_: 2yaw A: [207509]
    automated match to d2yaxc_
    complexed with act, fe, hg
  2. Domain d2yawb_: 2yaw B: [207510]
    automated match to d2yaxc_
    complexed with act, fe, hg
  3. Domain d2yawc_: 2yaw C: [207511]
    automated match to d2yaxc_
    complexed with act, fe, hg
  4. Domain d2yawd_: 2yaw D: [207512]
    automated match to d2yaxc_
    complexed with act, fe, hg
  5. Domain d2yawe_: 2yaw E: [207513]
    automated match to d2yaxc_
    complexed with act, fe, hg
  6. Domain d2yawf_: 2yaw F: [207514]
    automated match to d2yaxc_
    complexed with act, fe, hg
4. Domains for 2yax:
  1. Domain d2yaxa_: 2yax A: [198697]
    automated match to d2yaxc_
    complexed with fe
  2. Domain d2yaxb_: 2yax B: [198698]
    automated match to d2yaxc_
    complexed with fe
  3. Domain d2yaxc_: 2yax C: [196087]
    automated match to d2cb2a1
    complexed with fe
  4. Domain d2yaxd_: 2yax D: [198699]
    automated match to d2yaxc_
    complexed with fe
  5. Domain d2yaxe_: 2yax E: [198700]
    automated match to d2yaxc_
    complexed with fe
  6. Domain d2yaxf_: 2yax F: [198701]
    automated match to d2yaxc_
    complexed with fe
Acidianus tengchongenses [188741] (1 PDB entry)
- Domain for 3bxv:
  - Domain d3bxva_: 3bxv A: [172926]
    automated match to d2cb2a1
    complexed with fe

More info for Protein automated matches from d.58.4.17: SOR-like

Timeline for Protein automated matches from d.58.4.17: SOR-like:

Protein automated matches from d.58.4.17: SOR-like first appeared in SCOPe 2.01
Protein automated matches from d.58.4.17: SOR-like appears in SCOPe 2.04
Protein automated matches from d.58.4.17: SOR-like appears in SCOPe 2.06
Protein automated matches from d.58.4.17: SOR-like appears in the current release, SCOPe 2.08