Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2516578Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2517142Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 2517426Family d.58.4.17: SOR-like [143278] (2 proteins)
    Pfam PF07682; duplication: consists of two similar domains
  6. 2517430Protein automated matches [190550] (3 species)
    not a true protein

Species:

  1. 2517431Acidianus ambivalens [TaxId:2283] [187530] (10 PDB entries)
    1. Domains for 2cb2:
      1. 2517444Domain d2cb2b_: 2cb2 B: [161398]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      2. 2517445Domain d2cb2c_: 2cb2 C: [161399]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      3. 2517446Domain d2cb2d_: 2cb2 D: [161400]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      4. 2517447Domain d2cb2e_: 2cb2 E: [161401]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      5. 2517448Domain d2cb2f_: 2cb2 F: [161402]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
    2. Domains for 2yav:
      1. 2517432Domain d2yava_: 2yav A: [207503]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      2. 2517433Domain d2yavb_: 2yav B: [207504]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      3. 2517434Domain d2yavc_: 2yav C: [207505]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      4. 2517435Domain d2yavd_: 2yav D: [207506]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      5. 2517436Domain d2yave_: 2yav E: [207507]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      6. 2517437Domain d2yavf_: 2yav F: [207508]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
    3. Domains for 2yaw:
      1. 2517449Domain d2yawa_: 2yaw A: [207509]
        automated match to d2yaxc_
        complexed with act, fe, hg
      2. 2517450Domain d2yawb_: 2yaw B: [207510]
        automated match to d2yaxc_
        complexed with act, fe, hg
      3. 2517451Domain d2yawc_: 2yaw C: [207511]
        automated match to d2yaxc_
        complexed with act, fe, hg
      4. 2517452Domain d2yawd_: 2yaw D: [207512]
        automated match to d2yaxc_
        complexed with act, fe, hg
      5. 2517453Domain d2yawe_: 2yaw E: [207513]
        automated match to d2yaxc_
        complexed with act, fe, hg
      6. 2517454Domain d2yawf_: 2yaw F: [207514]
        automated match to d2yaxc_
        complexed with act, fe, hg
    4. Domains for 2yax:
      1. 2517438Domain d2yaxa_: 2yax A: [198697]
        automated match to d2yaxc_
        complexed with fe
      2. 2517439Domain d2yaxb_: 2yax B: [198698]
        automated match to d2yaxc_
        complexed with fe
      3. 2517440Domain d2yaxc_: 2yax C: [196087]
        automated match to d2cb2a1
        complexed with fe
      4. 2517441Domain d2yaxd_: 2yax D: [198699]
        automated match to d2yaxc_
        complexed with fe
      5. 2517442Domain d2yaxe_: 2yax E: [198700]
        automated match to d2yaxc_
        complexed with fe
      6. 2517443Domain d2yaxf_: 2yax F: [198701]
        automated match to d2yaxc_
        complexed with fe
    5. Domains for 6qjc:
      1. 3079820Domain d6qjcb_: 6qjc B: [379882]
        automated match to d3bxva_
        complexed with css, fe, tsy
      2. 3079821Domain d6qjcc_: 6qjc C: [379883]
        automated match to d3bxva_
        complexed with css, fe, tsy
      3. 3079837Domain d6qjcd_: 6qjc D: [379899]
        automated match to d3bxva_
        complexed with css, fe, tsy
      4. 3079884Domain d6qjca_: 6qjc A: [379946]
        automated match to d3bxva_
        complexed with css, fe, tsy
    6. Domains for 6qka:
      1. 3080799Domain d6qkac_: 6qka C: [380861]
        automated match to d3bxva_
        complexed with css, fe, tsy
      2. 3080800Domain d6qkad_: 6qka D: [380862]
        automated match to d3bxva_
        complexed with css, fe, tsy
      3. 3080837Domain d6qkab_: 6qka B: [380899]
        automated match to d3bxva_
        complexed with css, fe, tsy
      4. 3080864Domain d6qkae_: 6qka E: [380926]
        automated match to d3bxva_
        complexed with css, fe, tsy
      5. 3080910Domain d6qkaa_: 6qka A: [380972]
        automated match to d3bxva_
        complexed with css, fe, tsy
      6. 3080911Domain d6qkaf_: 6qka F: [380973]
        automated match to d3bxva_
        complexed with css, fe, tsy
    7. Domains for 6qkm:
      1. 3080810Domain d6qkme_: 6qkm E: [380872]
        automated match to d3bxva_
        complexed with css, fe, tsy
      2. 3080847Domain d6qkma_: 6qkm A: [380909]
        automated match to d3bxva_
        complexed with css, fe, tsy
      3. 3080853Domain d6qkmc_: 6qkm C: [380915]
        automated match to d3bxva_
        complexed with css, fe, tsy
      4. 3080879Domain d6qkmb_: 6qkm B: [380941]
        automated match to d3bxva_
        complexed with css, fe, tsy
      5. 3080893Domain d6qkmf_: 6qkm F: [380955]
        automated match to d3bxva_
        complexed with css, fe, tsy
      6. 3080902Domain d6qkmd_: 6qkm D: [380964]
        automated match to d3bxva_
        complexed with css, fe, tsy
    8. Domains for 6qmv:
      1. 3081693Domain d6qmve_: 6qmv E: [381755]
        automated match to d3bxva_
        complexed with css, tsy
      2. 3081719Domain d6qmvd_: 6qmv D: [381781]
        automated match to d3bxva_
        complexed with css, tsy
      3. 3081734Domain d6qmvb_: 6qmv B: [381796]
        automated match to d3bxva_
        complexed with css, tsy
      4. 3081744Domain d6qmvc_: 6qmv C: [381806]
        automated match to d3bxva_
        complexed with css, tsy
      5. 3081770Domain d6qmva_: 6qmv A: [381832]
        automated match to d3bxva_
        complexed with css, tsy
      6. 3081778Domain d6qmvf_: 6qmv F: [381840]
        automated match to d3bxva_
        complexed with css, tsy
    9. Domains for 6qne:
      1. 3081717Domain d6qnef_: 6qne F: [381779]
        automated match to d3bxva_
        complexed with fe
      2. 3081724Domain d6qneb_: 6qne B: [381786]
        automated match to d3bxva_
        complexed with fe
      3. 3081731Domain d6qnee_: 6qne E: [381793]
        automated match to d3bxva_
        complexed with fe
      4. 3081749Domain d6qned_: 6qne D: [381811]
        automated match to d3bxva_
        complexed with fe
      5. 3081752Domain d6qnea_: 6qne A: [381814]
        automated match to d3bxva_
        complexed with fe
      6. 3081754Domain d6qnec_: 6qne C: [381816]
        automated match to d3bxva_
        complexed with fe
    10. Domains for 6qo0:
      1. 3081745Domain d6qo0d_: 6qo0 D: [381807]
        automated match to d3bxva_
        complexed with fe
      2. 3081773Domain d6qo0a_: 6qo0 A: [381835]
        automated match to d3bxva_
        complexed with fe
      3. 3081789Domain d6qo0b_: 6qo0 B: [381851]
        automated match to d3bxva_
        complexed with fe
      4. 3081831Domain d6qo0c_: 6qo0 C: [381893]
        automated match to d3bxva_
        complexed with fe
  2. 2517455Acidianus tengchongenses [188741] (1 PDB entry)
  3. 3089200Sulfurisphaera tokodaii [TaxId:273063] [389262] (2 PDB entries)
    1. Domains for 6m35:
      1. 3089214Domain d6m35b_: 6m35 B: [389276]
        automated match to d3bxva_
        complexed with fe, gol, so4
      2. 3089217Domain d6m35d_: 6m35 D: [389279]
        automated match to d3bxva_
        complexed with fe, gol, so4
      3. 3089221Domain d6m35f_: 6m35 F: [389283]
        automated match to d3bxva_
        complexed with fe, gol, so4
      4. 3089243Domain d6m35c_: 6m35 C: [389305]
        automated match to d3bxva_
        complexed with fe, gol, so4
      5. 3089245Domain d6m35g_: 6m35 G: [389307]
        automated match to d3bxva_
        complexed with fe, gol, so4
      6. 3089253Domain d6m35a_: 6m35 A: [389315]
        automated match to d3bxva_
        complexed with fe, gol, so4
      7. 3089267Domain d6m35h_: 6m35 H: [389329]
        automated match to d3bxva_
        complexed with fe, gol, so4
      8. 3089270Domain d6m35e_: 6m35 E: [389332]
        automated match to d3bxva_
        complexed with fe, gol, so4
    2. Domains for 6m3x:
      1. 3089201Domain d6m3xc_: 6m3x C: [389263]
        automated match to d3bxva_
        complexed with fe
      2. 3089203Domain d6m3xe_: 6m3x E: [389265]
        automated match to d3bxva_
        complexed with fe
      3. 3089206Domain d6m3xa_: 6m3x A: [389268]
        automated match to d3bxva_
        complexed with fe
      4. 3089207Domain d6m3xn_: 6m3x N: [389269]
        automated match to d3bxva_
        complexed with fe
      5. 3089212Domain d6m3xi_: 6m3x I: [389274]
        automated match to d3bxva_
        complexed with fe
      6. 3089315Domain d6m3xo_: 6m3x O: [389377]
        automated match to d3bxva_
        complexed with fe
      7. 3089362Domain d6m3xw_: 6m3x W: [389424]
        automated match to d3bxva_
        complexed with fe
      8. 3089384Domain d6m3xl_: 6m3x L: [389446]
        automated match to d3bxva_
        complexed with fe
      9. 3089385Domain d6m3xg_: 6m3x G: [389447]
        automated match to d3bxva_
        complexed with fe
      10. 3089389Domain d6m3xq_: 6m3x Q: [389451]
        automated match to d3bxva_
        complexed with fe
      11. 3089435Domain d6m3xf_: 6m3x F: [389497]
        automated match to d3bxva_
        complexed with fe
      12. 3089536Domain d6m3xv_: 6m3x V: [389598]
        automated match to d3bxva_
        complexed with fe
      13. 3089539Domain d6m3xm_: 6m3x M: [389601]
        automated match to d3bxva_
        complexed with fe
      14. 3089540Domain d6m3xb_: 6m3x B: [389602]
        automated match to d3bxva_
        complexed with fe
      15. 3089541Domain d6m3xs_: 6m3x S: [389603]
        automated match to d3bxva_
        complexed with fe
      16. 3089544Domain d6m3xp_: 6m3x P: [389606]
        automated match to d3bxva_
        complexed with fe
      17. 3089545Domain d6m3xh_: 6m3x H: [389607]
        automated match to d3bxva_
        complexed with fe
      18. 3089546Domain d6m3xt_: 6m3x T: [389608]
        automated match to d3bxva_
        complexed with fe
      19. 3089547Domain d6m3xr_: 6m3x R: [389609]
        automated match to d3bxva_
        complexed with fe
      20. 3089549Domain d6m3xj_: 6m3x J: [389611]
        automated match to d3bxva_
        complexed with fe
      21. 3089550Domain d6m3xx_: 6m3x X: [389612]
        automated match to d3bxva_
        complexed with fe
      22. 3089551Domain d6m3xd_: 6m3x D: [389613]
        automated match to d3bxva_
        complexed with fe
      23. 3089552Domain d6m3xk_: 6m3x K: [389614]
        automated match to d3bxva_
        complexed with fe
      24. 3089553Domain d6m3xu_: 6m3x U: [389615]
        automated match to d3bxva_
        complexed with fe

More info for Protein automated matches from d.58.4.17: SOR-like

Timeline for Protein automated matches from d.58.4.17: SOR-like: