Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2516578Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2517142Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 2517426Family d.58.4.17: SOR-like [143278] (2 protein domains)
    Pfam PF07682; duplication: consists of two similar domains
  6. 2517430Protein automated matches [190550] (2 species)
    not a true protein

Species:

  1. 2517431Acidianus ambivalens [TaxId:2283] [187530] (4 PDB entries)
    1. Domains for 2cb2:
      1. 2517444Domain d2cb2b_: 2cb2 B: [161398]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      2. 2517445Domain d2cb2c_: 2cb2 C: [161399]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      3. 2517446Domain d2cb2d_: 2cb2 D: [161400]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      4. 2517447Domain d2cb2e_: 2cb2 E: [161401]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
      5. 2517448Domain d2cb2f_: 2cb2 F: [161402]
        Other proteins in same PDB: d2cb2a1
        automated match to d2cb2a1
        complexed with fe
    2. Domains for 2yav:
      1. 2517432Domain d2yava_: 2yav A: [207503]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      2. 2517433Domain d2yavb_: 2yav B: [207504]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      3. 2517434Domain d2yavc_: 2yav C: [207505]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      4. 2517435Domain d2yavd_: 2yav D: [207506]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      5. 2517436Domain d2yave_: 2yav E: [207507]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
      6. 2517437Domain d2yavf_: 2yav F: [207508]
        automated match to d2yaxc_
        complexed with act, cl, fe, zn
    3. Domains for 2yaw:
      1. 2517449Domain d2yawa_: 2yaw A: [207509]
        automated match to d2yaxc_
        complexed with act, fe, hg
      2. 2517450Domain d2yawb_: 2yaw B: [207510]
        automated match to d2yaxc_
        complexed with act, fe, hg
      3. 2517451Domain d2yawc_: 2yaw C: [207511]
        automated match to d2yaxc_
        complexed with act, fe, hg
      4. 2517452Domain d2yawd_: 2yaw D: [207512]
        automated match to d2yaxc_
        complexed with act, fe, hg
      5. 2517453Domain d2yawe_: 2yaw E: [207513]
        automated match to d2yaxc_
        complexed with act, fe, hg
      6. 2517454Domain d2yawf_: 2yaw F: [207514]
        automated match to d2yaxc_
        complexed with act, fe, hg
    4. Domains for 2yax:
      1. 2517438Domain d2yaxa_: 2yax A: [198697]
        automated match to d2yaxc_
        complexed with fe
      2. 2517439Domain d2yaxb_: 2yax B: [198698]
        automated match to d2yaxc_
        complexed with fe
      3. 2517440Domain d2yaxc_: 2yax C: [196087]
        automated match to d2cb2a1
        complexed with fe
      4. 2517441Domain d2yaxd_: 2yax D: [198699]
        automated match to d2yaxc_
        complexed with fe
      5. 2517442Domain d2yaxe_: 2yax E: [198700]
        automated match to d2yaxc_
        complexed with fe
      6. 2517443Domain d2yaxf_: 2yax F: [198701]
        automated match to d2yaxc_
        complexed with fe
  2. 2517455Acidianus tengchongenses [188741] (1 PDB entry)

More info for Protein automated matches from d.58.4.17: SOR-like

Timeline for Protein automated matches from d.58.4.17: SOR-like: