Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1667067Fold d.118: N-acetylmuramoyl-L-alanine amidase-like [55845] (1 superfamily)
    contains mixed beta-sheet
  4. 1667068Superfamily d.118.1: N-acetylmuramoyl-L-alanine amidase-like [55846] (2 families) (S)
  5. 1667069Family d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like [55847] (11 proteins)
    Family 2 zinc amidase;
  6. 1667130Protein automated matches [190549] (4 species)
    not a true protein

Species:

  1. 1667131Bacillus phage [TaxId:347962] [255404] (1 PDB entry)
  2. 1667133Camel (Camelus dromedarius) [TaxId:9838] [188016] (28 PDB entries)
    1. Domains for 2r90:
      1. 1667228Domain d2r90a_: 2r90 A: [168009]
        automated match to d1ycka1
      2. 1667229Domain d2r90b_: 2r90 B: [168010]
        automated match to d1ycka1
      3. 1667230Domain d2r90c_: 2r90 C: [168011]
        automated match to d1ycka1
      4. 1667231Domain d2r90d_: 2r90 D: [168012]
        automated match to d1ycka1
    2. Domains for 3c2x:
      1. 1667142Domain d3c2xa_: 3c2x A: [173000]
        automated match to d1ycka1
        complexed with gol, so4, tla
      2. 1667143Domain d3c2xb_: 3c2x B: [173001]
        automated match to d1ycka1
        complexed with gol, so4, tla
      3. 1667144Domain d3c2xc_: 3c2x C: [173002]
        automated match to d1ycka1
        complexed with gol, so4, tla
      4. 1667145Domain d3c2xd_: 3c2x D: [173003]
        automated match to d1ycka1
        complexed with gol, so4, tla
    3. Domains for 3cg9:
      1. 1667220Domain d3cg9a_: 3cg9 A: [173220]
        automated match to d1ycka1
        complexed with ram, tla
      2. 1667221Domain d3cg9b_: 3cg9 B: [173221]
        automated match to d1ycka1
        complexed with ram, tla
      3. 1667222Domain d3cg9c_: 3cg9 C: [173222]
        automated match to d1ycka1
        complexed with ram, tla
      4. 1667223Domain d3cg9d_: 3cg9 D: [173223]
        automated match to d1ycka1
        complexed with ram, tla
    4. Domains for 3cor:
      1. 1667236Domain d3cora_: 3cor A: [245512]
        automated match to d3ng4a_
        complexed with nga, tla
      2. 1667237Domain d3corb_: 3cor B: [245513]
        automated match to d3ng4a_
        complexed with nga, tla
      3. 1667238Domain d3corc_: 3cor C: [245514]
        automated match to d3ng4a_
        complexed with nga, tla
      4. 1667239Domain d3cord_: 3cor D: [245515]
        automated match to d3ng4a_
        complexed with nga, tla
    5. Domains for 3ng4:
      1. 1667134Domain d3ng4a_: 3ng4 A: [182248]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      2. 1667135Domain d3ng4b_: 3ng4 B: [182249]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      3. 1667136Domain d3ng4c_: 3ng4 C: [182250]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      4. 1667137Domain d3ng4d_: 3ng4 D: [182251]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
    6. Domains for 3nkw:
      1. 1667180Domain d3nkwa_: 3nkw A: [182347]
        automated match to d1ycka1
        complexed with nag, tla
      2. 1667181Domain d3nkwb_: 3nkw B: [182348]
        automated match to d1ycka1
        complexed with nag, tla
      3. 1667182Domain d3nkwc_: 3nkw C: [182349]
        automated match to d1ycka1
        complexed with nag, tla
      4. 1667183Domain d3nkwd_: 3nkw D: [182350]
        automated match to d1ycka1
        complexed with nag, tla
    7. Domains for 3nno:
      1. 1667208Domain d3nnoa_: 3nno A: [182419]
        automated match to d1ycka1
        complexed with ram, tla
      2. 1667209Domain d3nnob_: 3nno B: [182420]
        automated match to d1ycka1
        complexed with ram, tla
      3. 1667210Domain d3nnoc_: 3nno C: [182421]
        automated match to d1ycka1
        complexed with ram, tla
      4. 1667211Domain d3nnod_: 3nno D: [182422]
        automated match to d1ycka1
        complexed with ram, tla
    8. Domains for 3nw3:
      1. 1667188Domain d3nw3a_: 3nw3 A: [182585]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      2. 1667189Domain d3nw3b_: 3nw3 B: [182586]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      3. 1667190Domain d3nw3c_: 3nw3 C: [182587]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      4. 1667191Domain d3nw3d_: 3nw3 D: [182588]
        automated match to d1ycka1
        complexed with gol, mu2, tla
    9. Domains for 3o4k:
      1. 1667146Domain d3o4ka_: 3o4k A: [182785]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      2. 1667147Domain d3o4kb_: 3o4k B: [182786]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      3. 1667148Domain d3o4kc_: 3o4k C: [182787]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      4. 1667149Domain d3o4kd_: 3o4k D: [182788]
        automated match to d1ycka1
        complexed with gol, ltc, tla
    10. Domains for 3ogx:
      1. 1667212Domain d3ogxa_: 3ogx A: [183023]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      2. 1667213Domain d3ogxb_: 3ogx B: [183024]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      3. 1667214Domain d3ogxc_: 3ogx C: [183025]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      4. 1667215Domain d3ogxd_: 3ogx D: [183026]
        automated match to d1ycka1
        complexed with gol, h1s, tla
    11. Domains for 3olk:
      1. 1667196Domain d3olka_: 3olk A: [183136]
        automated match to d1ycka1
        complexed with amu, gol, tla
      2. 1667197Domain d3olkb_: 3olk B: [183137]
        automated match to d1ycka1
        complexed with amu, gol, tla
      3. 1667198Domain d3olkc_: 3olk C: [183138]
        automated match to d1ycka1
        complexed with amu, gol, tla
      4. 1667199Domain d3olkd_: 3olk D: [183139]
        automated match to d1ycka1
        complexed with amu, gol, tla
    12. Domains for 3qs0:
      1. 1667184Domain d3qs0a_: 3qs0 A: [184601]
        automated match to d1ycka1
        complexed with gol, nag, tla
      2. 1667185Domain d3qs0b_: 3qs0 B: [184602]
        automated match to d1ycka1
        complexed with gol, nag, tla
      3. 1667186Domain d3qs0c_: 3qs0 C: [184603]
        automated match to d1ycka1
        complexed with gol, nag, tla
      4. 1667187Domain d3qs0d_: 3qs0 D: [184604]
        automated match to d1ycka1
        complexed with gol, nag, tla
    13. Domains for 3qv4:
      1. 1667204Domain d3qv4a_: 3qv4 A: [184638]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      2. 1667205Domain d3qv4b_: 3qv4 B: [184639]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      3. 1667206Domain d3qv4c_: 3qv4 C: [184640]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      4. 1667207Domain d3qv4d_: 3qv4 D: [184641]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
    14. Domains for 3rt4:
      1. 1667138Domain d3rt4a_: 3rt4 A: [185150]
        automated match to d1ycka1
        complexed with lp5, tla
      2. 1667139Domain d3rt4b_: 3rt4 B: [185151]
        automated match to d1ycka1
        complexed with lp5, tla
      3. 1667140Domain d3rt4c_: 3rt4 C: [185152]
        automated match to d1ycka1
        complexed with lp5, tla
      4. 1667141Domain d3rt4d_: 3rt4 D: [185153]
        automated match to d1ycka1
        complexed with lp5, tla
    15. Domains for 3t2v:
      1. 1667176Domain d3t2va_: 3t2v A: [192984]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      2. 1667177Domain d3t2vb_: 3t2v B: [192985]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      3. 1667178Domain d3t2vc_: 3t2v C: [192986]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      4. 1667179Domain d3t2vd_: 3t2v D: [192107]
        automated match to d2r90a_
        complexed with gol, kkj, tla
    16. Domains for 3t39:
      1. 1667216Domain d3t39a_: 3t39 A: [200742]
        automated match to d2r90a_
        complexed with gol, skm, srt
      2. 1667217Domain d3t39b_: 3t39 B: [200743]
        automated match to d2r90a_
        complexed with gol, skm, srt
      3. 1667218Domain d3t39c_: 3t39 C: [200744]
        automated match to d2r90a_
        complexed with gol, skm, srt
      4. 1667219Domain d3t39d_: 3t39 D: [192108]
        automated match to d2r90a_
        complexed with gol, skm, srt
    17. Domains for 3uil:
      1. 1667162Domain d3uila_: 3uil A: [192170]
        automated match to d2r90a_
        complexed with dao, gol
      2. 1667163Domain d3uilb_: 3uil B: [192171]
        automated match to d2r90a_
        complexed with dao, gol
      3. 1667164Domain d3uilc_: 3uil C: [192172]
        automated match to d2r90a_
        complexed with dao, gol
      4. 1667165Domain d3uild_: 3uil D: [192173]
        automated match to d2r90a_
        complexed with dao, gol
    18. Domains for 3uml:
      1. 1667150Domain d3umla_: 3uml A: [186340]
        automated match to d1ycka1
        complexed with gol, isj
      2. 1667151Domain d3umlb_: 3uml B: [186341]
        automated match to d1ycka1
        complexed with gol, isj
      3. 1667152Domain d3umlc_: 3uml C: [186342]
        automated match to d1ycka1
        complexed with gol, isj
      4. 1667153Domain d3umld_: 3uml D: [186343]
        automated match to d1ycka1
        complexed with gol, isj
    19. Domains for 3umq:
      1. 1667158Domain d3umqa_: 3umq A: [192174]
        automated match to d2r90a_
        complexed with bua, gol
      2. 1667159Domain d3umqb_: 3umq B: [192175]
        automated match to d2r90a_
        complexed with bua, gol
      3. 1667160Domain d3umqc_: 3umq C: [192176]
        automated match to d2r90a_
        complexed with bua, gol
      4. 1667161Domain d3umqd_: 3umq D: [192177]
        automated match to d2r90a_
        complexed with bua, gol
    20. Domains for 3usx:
      1. 1667166Domain d3usxa_: 3usx A: [186399]
        automated match to d1ycka1
        complexed with gol, myr
      2. 1667167Domain d3usxb_: 3usx B: [186400]
        automated match to d1ycka1
        complexed with gol, myr
      3. 1667168Domain d3usxc_: 3usx C: [186401]
        automated match to d1ycka1
        complexed with gol, myr
      4. 1667169Domain d3usxd_: 3usx D: [186402]
        automated match to d1ycka1
        complexed with gol, myr
    21. Domains for 4ebs:
      1. 1667192Domain d4ebsa_: 4ebs A: [192369]
        automated match to d2r90a_
        complexed with amu, gol, tla
      2. 1667193Domain d4ebsb_: 4ebs B: [192370]
        automated match to d2r90a_
        complexed with amu, gol, tla
      3. 1667194Domain d4ebsc_: 4ebs C: [192371]
        automated match to d2r90a_
        complexed with amu, gol, tla
      4. 1667195Domain d4ebsd_: 4ebs D: [192372]
        automated match to d2r90a_
        complexed with amu, gol, tla
    22. Domains for 4ebt:
      1. 1667170Domain d4ebta_: 4ebt A: [192373]
        automated match to d2r90a_
        complexed with nag, tla
      2. 1667171Domain d4ebtb_: 4ebt B: [192374]
        automated match to d2r90a_
        complexed with nag, tla
      3. 1667172Domain d4ebtc_: 4ebt C: [192375]
        automated match to d2r90a_
        complexed with nag, tla
      4. 1667173Domain d4ebtd_: 4ebt D: [192376]
        automated match to d2r90a_
        complexed with nag, tla
    23. Domains for 4fnn:
      1. 1667154Domain d4fnna_: 4fnn A: [192437]
        automated match to d2r90a_
        complexed with ste
      2. 1667155Domain d4fnnb_: 4fnn B: [192438]
        automated match to d2r90a_
        complexed with ste
      3. 1667156Domain d4fnnc_: 4fnn C: [192439]
        automated match to d2r90a_
        complexed with ste
      4. 1667157Domain d4fnnd_: 4fnn D: [192440]
        automated match to d2r90a_
        complexed with ste
    24. Domains for 4gf9:
      1. 1667240Domain d4gf9a_: 4gf9 A: [192488]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      2. 1667241Domain d4gf9b_: 4gf9 B: [192486]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      3. 1667242Domain d4gf9c_: 4gf9 C: [192489]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      4. 1667243Domain d4gf9d_: 4gf9 D: [192487]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
    25. Domains for 4opp:
      1. 1667200Domain d4oppa_: 4opp A: [237411]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
      2. 1667201Domain d4oppb_: 4opp B: [237413]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
      3. 1667202Domain d4oppc_: 4opp C: [237416]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
      4. 1667203Domain d4oppd_: 4opp D: [237418]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
    26. Domains for 4orv:
      1. 1667224Domain d4orva_: 4orv A: [237412]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
      2. 1667225Domain d4orvb_: 4orv B: [237417]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
      3. 1667226Domain d4orvc_: 4orv C: [237415]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
      4. 1667227Domain d4orvd_: 4orv D: [237414]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
    27. Domains for 4oug:
      1. 1667232Domain d4ouga_: 4oug A: [237419]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
      2. 1667233Domain d4ougb_: 4oug B: [237422]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
      3. 1667234Domain d4ougc_: 4oug C: [237420]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
      4. 1667235Domain d4ougd_: 4oug D: [237421]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
    28. Domains for 4q8s:
      1. 1667174Domain d4q8sb_: 4q8s B: [257632]
        automated match to d3ng4a_
        complexed with gol, nag, pnr, tla
      2. 1667175Domain d4q8sc_: 4q8s C: [257631]
        automated match to d3ng4a_
        complexed with gol, nag, pnr, tla
  3. 1667244Fruit fly (Drosophila melanogaster) [TaxId:7227] [187529] (1 PDB entry)
  4. 1667248Human (Homo sapiens) [TaxId:9606] [187654] (1 PDB entry)

More info for Protein automated matches from d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like

Timeline for Protein automated matches from d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like: