Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2536709Fold d.118: N-acetylmuramoyl-L-alanine amidase-like [55845] (1 superfamily)
    contains mixed beta-sheet
  4. 2536710Superfamily d.118.1: N-acetylmuramoyl-L-alanine amidase-like [55846] (2 families) (S)
  5. 2536711Family d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like [55847] (11 proteins)
    Family 2 zinc amidase;
  6. 2536774Protein automated matches [190549] (4 species)
    not a true protein

Species:

  1. 2536775Bacillus phage [TaxId:347962] [255404] (1 PDB entry)
  2. 2536777Camel (Camelus dromedarius) [TaxId:9838] [188016] (40 PDB entries)
    1. Domains for 2r90:
      1. 2536874Domain d2r90a_: 2r90 A: [168009]
        automated match to d1ycka1
      2. 2536875Domain d2r90b_: 2r90 B: [168010]
        automated match to d1ycka1
      3. 2536876Domain d2r90c_: 2r90 C: [168011]
        automated match to d1ycka1
      4. 2536877Domain d2r90d_: 2r90 D: [168012]
        automated match to d1ycka1
    2. Domains for 3c2x:
      1. 2536790Domain d3c2xa_: 3c2x A: [173000]
        automated match to d1ycka1
        complexed with gol, so4, tla
      2. 2536791Domain d3c2xb_: 3c2x B: [173001]
        automated match to d1ycka1
        complexed with gol, so4, tla
      3. 2536792Domain d3c2xc_: 3c2x C: [173002]
        automated match to d1ycka1
        complexed with gol, so4, tla
      4. 2536793Domain d3c2xd_: 3c2x D: [173003]
        automated match to d1ycka1
        complexed with gol, so4, tla
    3. Domains for 3c93:
      1. 2536842Domain d3c93a_: 3c93 A: [305154]
        automated match to d3ng4a_
        complexed with ndg, tla
      2. 2536843Domain d3c93b_: 3c93 B: [305155]
        automated match to d3ng4a_
        complexed with ndg, tla
      3. 2536844Domain d3c93c_: 3c93 C: [305156]
        automated match to d3ng4a_
        complexed with ndg, tla
      4. 2536845Domain d3c93d_: 3c93 D: [305157]
        automated match to d3ng4a_
        complexed with ndg, tla
    4. Domains for 3cg9:
      1. 2536862Domain d3cg9a_: 3cg9 A: [173220]
        automated match to d1ycka1
        complexed with ram, tla
      2. 2536863Domain d3cg9b_: 3cg9 B: [173221]
        automated match to d1ycka1
        complexed with ram, tla
      3. 2536864Domain d3cg9c_: 3cg9 C: [173222]
        automated match to d1ycka1
        complexed with ram, tla
      4. 2536865Domain d3cg9d_: 3cg9 D: [173223]
        automated match to d1ycka1
        complexed with ram, tla
    5. Domains for 3cor:
      1. 2536882Domain d3cora_: 3cor A: [245512]
        automated match to d3ng4a_
        complexed with nga, tla
      2. 2536883Domain d3corb_: 3cor B: [245513]
        automated match to d3ng4a_
        complexed with nga, tla
      3. 2536884Domain d3corc_: 3cor C: [245514]
        automated match to d3ng4a_
        complexed with nga, tla
      4. 2536885Domain d3cord_: 3cor D: [245515]
        automated match to d3ng4a_
        complexed with nga, tla
    6. Domains for 3mu9:
      1. 2536786Domain d3mu9a_: 3mu9 A: [305980]
        automated match to d3ng4a_
        complexed with lp5, tla
      2. 2536787Domain d3mu9b_: 3mu9 B: [305981]
        automated match to d3ng4a_
        complexed with lp5, tla
      3. 2536788Domain d3mu9c_: 3mu9 C: [305982]
        automated match to d3ng4a_
        complexed with lp5, tla
      4. 2536789Domain d3mu9d_: 3mu9 D: [305983]
        automated match to d3ng4a_
        complexed with lp5, tla
    7. Domains for 3ng4:
      1. 2536778Domain d3ng4a_: 3ng4 A: [182248]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      2. 2536779Domain d3ng4b_: 3ng4 B: [182249]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      3. 2536780Domain d3ng4c_: 3ng4 C: [182250]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      4. 2536781Domain d3ng4d_: 3ng4 D: [182251]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
    8. Domains for 3nkw:
      1. 2536910Domain d3nkwa_: 3nkw A: [182347]
        automated match to d1ycka1
        complexed with nag, tla
      2. 2536911Domain d3nkwb_: 3nkw B: [182348]
        automated match to d1ycka1
        complexed with nag, tla
      3. 2536912Domain d3nkwc_: 3nkw C: [182349]
        automated match to d1ycka1
        complexed with nag, tla
      4. 2536913Domain d3nkwd_: 3nkw D: [182350]
        automated match to d1ycka1
        complexed with nag, tla
    9. Domains for 3nno:
      1. 2536850Domain d3nnoa_: 3nno A: [182419]
        automated match to d1ycka1
        complexed with ram, tla
      2. 2536851Domain d3nnob_: 3nno B: [182420]
        automated match to d1ycka1
        complexed with ram, tla
      3. 2536852Domain d3nnoc_: 3nno C: [182421]
        automated match to d1ycka1
        complexed with ram, tla
      4. 2536853Domain d3nnod_: 3nno D: [182422]
        automated match to d1ycka1
        complexed with ram, tla
    10. Domains for 3nw3:
      1. 2536834Domain d3nw3a_: 3nw3 A: [182585]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      2. 2536835Domain d3nw3b_: 3nw3 B: [182586]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      3. 2536836Domain d3nw3c_: 3nw3 C: [182587]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      4. 2536837Domain d3nw3d_: 3nw3 D: [182588]
        automated match to d1ycka1
        complexed with gol, mu2, tla
    11. Domains for 3o4k:
      1. 2536794Domain d3o4ka_: 3o4k A: [182785]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      2. 2536795Domain d3o4kb_: 3o4k B: [182786]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      3. 2536796Domain d3o4kc_: 3o4k C: [182787]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      4. 2536797Domain d3o4kd_: 3o4k D: [182788]
        automated match to d1ycka1
        complexed with gol, ltc, tla
    12. Domains for 3ogx:
      1. 2536854Domain d3ogxa_: 3ogx A: [183023]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      2. 2536855Domain d3ogxb_: 3ogx B: [183024]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      3. 2536856Domain d3ogxc_: 3ogx C: [183025]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      4. 2536857Domain d3ogxd_: 3ogx D: [183026]
        automated match to d1ycka1
        complexed with gol, h1s, tla
    13. Domains for 3olk:
      1. 2536894Domain d3olka_: 3olk A: [183136]
        automated match to d1ycka1
        complexed with amu, gol, tla
      2. 2536895Domain d3olkb_: 3olk B: [183137]
        automated match to d1ycka1
        complexed with amu, gol, tla
      3. 2536896Domain d3olkc_: 3olk C: [183138]
        automated match to d1ycka1
        complexed with amu, gol, tla
      4. 2536897Domain d3olkd_: 3olk D: [183139]
        automated match to d1ycka1
        complexed with amu, gol, tla
    14. Domains for 3qs0:
      1. 2536830Domain d3qs0a_: 3qs0 A: [184601]
        automated match to d1ycka1
        complexed with gol, nag, tla
      2. 2536831Domain d3qs0b_: 3qs0 B: [184602]
        automated match to d1ycka1
        complexed with gol, nag, tla
      3. 2536832Domain d3qs0c_: 3qs0 C: [184603]
        automated match to d1ycka1
        complexed with gol, nag, tla
      4. 2536833Domain d3qs0d_: 3qs0 D: [184604]
        automated match to d1ycka1
        complexed with gol, nag, tla
    15. Domains for 3qv4:
      1. 2536846Domain d3qv4a_: 3qv4 A: [184638]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      2. 2536847Domain d3qv4b_: 3qv4 B: [184639]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      3. 2536848Domain d3qv4c_: 3qv4 C: [184640]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      4. 2536849Domain d3qv4d_: 3qv4 D: [184641]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
    16. Domains for 3rt4:
      1. 2536782Domain d3rt4a_: 3rt4 A: [185150]
        automated match to d1ycka1
        complexed with lp5, tla
      2. 2536783Domain d3rt4b_: 3rt4 B: [185151]
        automated match to d1ycka1
        complexed with lp5, tla
      3. 2536784Domain d3rt4c_: 3rt4 C: [185152]
        automated match to d1ycka1
        complexed with lp5, tla
      4. 2536785Domain d3rt4d_: 3rt4 D: [185153]
        automated match to d1ycka1
        complexed with lp5, tla
    17. Domains for 3t2v:
      1. 2536826Domain d3t2va_: 3t2v A: [192984]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      2. 2536827Domain d3t2vb_: 3t2v B: [192985]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      3. 2536828Domain d3t2vc_: 3t2v C: [192986]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      4. 2536829Domain d3t2vd_: 3t2v D: [192107]
        automated match to d2r90a_
        complexed with gol, kkj, tla
    18. Domains for 3t39:
      1. 2536858Domain d3t39a_: 3t39 A: [200742]
        automated match to d2r90a_
        complexed with gol, skm, srt
      2. 2536859Domain d3t39b_: 3t39 B: [200743]
        automated match to d2r90a_
        complexed with gol, skm, srt
      3. 2536860Domain d3t39c_: 3t39 C: [200744]
        automated match to d2r90a_
        complexed with gol, skm, srt
      4. 2536861Domain d3t39d_: 3t39 D: [192108]
        automated match to d2r90a_
        complexed with gol, skm, srt
    19. Domains for 3uil:
      1. 2536814Domain d3uila_: 3uil A: [192170]
        automated match to d2r90a_
        complexed with dao, gol
      2. 2536815Domain d3uilb_: 3uil B: [192171]
        automated match to d2r90a_
        complexed with dao, gol
      3. 2536816Domain d3uilc_: 3uil C: [192172]
        automated match to d2r90a_
        complexed with dao, gol
      4. 2536817Domain d3uild_: 3uil D: [192173]
        automated match to d2r90a_
        complexed with dao, gol
    20. Domains for 3uml:
      1. 2536798Domain d3umla_: 3uml A: [186340]
        automated match to d1ycka1
        complexed with gol, isj
      2. 2536799Domain d3umlb_: 3uml B: [186341]
        automated match to d1ycka1
        complexed with gol, isj
      3. 2536800Domain d3umlc_: 3uml C: [186342]
        automated match to d1ycka1
        complexed with gol, isj
      4. 2536801Domain d3umld_: 3uml D: [186343]
        automated match to d1ycka1
        complexed with gol, isj
    21. Domains for 3umq:
      1. 2536810Domain d3umqa_: 3umq A: [192174]
        automated match to d2r90a_
        complexed with bua, gol
      2. 2536811Domain d3umqb_: 3umq B: [192175]
        automated match to d2r90a_
        complexed with bua, gol
      3. 2536812Domain d3umqc_: 3umq C: [192176]
        automated match to d2r90a_
        complexed with bua, gol
      4. 2536813Domain d3umqd_: 3umq D: [192177]
        automated match to d2r90a_
        complexed with bua, gol
    22. Domains for 3usx:
      1. 2536818Domain d3usxa_: 3usx A: [186399]
        automated match to d1ycka1
        complexed with gol, myr
      2. 2536819Domain d3usxb_: 3usx B: [186400]
        automated match to d1ycka1
        complexed with gol, myr
      3. 2536820Domain d3usxc_: 3usx C: [186401]
        automated match to d1ycka1
        complexed with gol, myr
      4. 2536821Domain d3usxd_: 3usx D: [186402]
        automated match to d1ycka1
        complexed with gol, myr
    23. Domains for 4ebs:
      1. 2536906Domain d4ebsa_: 4ebs A: [192369]
        automated match to d2r90a_
        complexed with amu, gol, tla
      2. 2536907Domain d4ebsb_: 4ebs B: [192370]
        automated match to d2r90a_
        complexed with amu, gol, tla
      3. 2536908Domain d4ebsc_: 4ebs C: [192371]
        automated match to d2r90a_
        complexed with amu, gol, tla
      4. 2536909Domain d4ebsd_: 4ebs D: [192372]
        automated match to d2r90a_
        complexed with amu, gol, tla
    24. Domains for 4fnn:
      1. 2536806Domain d4fnna_: 4fnn A: [192437]
        automated match to d2r90a_
        complexed with ste
      2. 2536807Domain d4fnnb_: 4fnn B: [192438]
        automated match to d2r90a_
        complexed with ste
      3. 2536808Domain d4fnnc_: 4fnn C: [192439]
        automated match to d2r90a_
        complexed with ste
      4. 2536809Domain d4fnnd_: 4fnn D: [192440]
        automated match to d2r90a_
        complexed with ste
    25. Domains for 4gf9:
      1. 2536890Domain d4gf9a_: 4gf9 A: [192488]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      2. 2536891Domain d4gf9b_: 4gf9 B: [192486]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      3. 2536892Domain d4gf9c_: 4gf9 C: [192489]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      4. 2536893Domain d4gf9d_: 4gf9 D: [192487]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
    26. Domains for 4opp:
      1. 2536838Domain d4oppa_: 4opp A: [237411]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
      2. 2536839Domain d4oppb_: 4opp B: [237413]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
      3. 2536840Domain d4oppc_: 4opp C: [237416]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
      4. 2536841Domain d4oppd_: 4opp D: [237418]
        automated match to d2r90a_
        complexed with 11z, gol, nag, tla
    27. Domains for 4orv:
      1. 2536870Domain d4orva_: 4orv A: [237412]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
      2. 2536871Domain d4orvb_: 4orv B: [237417]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
      3. 2536872Domain d4orvc_: 4orv C: [237415]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
      4. 2536873Domain d4orvd_: 4orv D: [237414]
        automated match to d2r90a_
        complexed with gol, nag, tla, xxc
    28. Domains for 4oug:
      1. 2536878Domain d4ouga_: 4oug A: [237419]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
      2. 2536879Domain d4ougb_: 4oug B: [237422]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
      3. 2536880Domain d4ougc_: 4oug C: [237420]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
      4. 2536881Domain d4ougd_: 4oug D: [237421]
        automated match to d2r90a_
        complexed with gol, lp5, plm, tla
    29. Domains for 4q8s:
      1. 2536822Domain d4q8sa_: 4q8s A: [263649]
        automated match to d3ng4a_
        complexed with gol, nag, pnr, tla
      2. 2536823Domain d4q8sb_: 4q8s B: [257632]
        automated match to d3ng4a_
        complexed with gol, nag, pnr, tla
      3. 2536824Domain d4q8sc_: 4q8s C: [257631]
        automated match to d3ng4a_
        complexed with gol, nag, pnr, tla
      4. 2536825Domain d4q8sd_: 4q8s D: [263650]
        automated match to d3ng4a_
        complexed with gol, nag, pnr, tla
    30. Domains for 4q9e:
      1. 2536866Domain d4q9ea_: 4q9e A: [267274]
        automated match to d3ng4a_
        complexed with gol, nag, tla, xxh
      2. 2536867Domain d4q9eb_: 4q9e B: [267275]
        automated match to d3ng4a_
        complexed with gol, nag, tla, xxh
      3. 2536868Domain d4q9ec_: 4q9e C: [267276]
        automated match to d3ng4a_
        complexed with gol, nag, tla, xxh
      4. 2536869Domain d4q9ed_: 4q9e D: [267277]
        automated match to d3ng4a_
        complexed with gol, nag, tla, xxh
    31. Domains for 5dwf:
      1. 2536802Domain d5dwfa_: 5dwf A: [278101]
        automated match to d3ng4a_
        complexed with edo, gol, tla
      2. 2536803Domain d5dwfb_: 5dwf B: [278102]
        automated match to d3ng4a_
        complexed with edo, gol, tla
      3. 2536804Domain d5dwfc_: 5dwf C: [278100]
        automated match to d3ng4a_
        complexed with edo, gol, tla
      4. 2536805Domain d5dwfd_: 5dwf D: [278099]
        automated match to d3ng4a_
        complexed with edo, gol, tla
    32. Domains for 5e0a:
      1. 2536902Domain d5e0aa_: 5e0a A: [278103]
        automated match to d1ycka1
        complexed with nag, tla
      2. 2536903Domain d5e0ab_: 5e0a B: [278104]
        automated match to d1ycka1
        complexed with nag, tla
      3. 2536904Domain d5e0ac_: 5e0a C: [278105]
        automated match to d1ycka1
        complexed with nag, tla
      4. 2536905Domain d5e0ad_: 5e0a D: [278108]
        automated match to d1ycka1
        complexed with nag, tla
    33. Domains for 5e0b:
      1. 2536898Domain d5e0ba_: 5e0b A: [278107]
        automated match to d1ycka1
        complexed with amu, gol, tla
      2. 2536899Domain d5e0bb_: 5e0b B: [278106]
        automated match to d1ycka1
        complexed with amu, gol, tla
      3. 2536900Domain d5e0bc_: 5e0b C: [278109]
        automated match to d1ycka1
        complexed with amu, gol, tla
      4. 2536901Domain d5e0bd_: 5e0b D: [278110]
        automated match to d1ycka1
        complexed with amu, gol, tla
    34. Domains for 5xgy:
      1. 2536886Domain d5xgya_: 5xgy A: [333952]
        automated match to d3ng4a_
        complexed with gol, tla
      2. 2536887Domain d5xgyb_: 5xgy B: [333944]
        automated match to d3ng4a_
        complexed with gol, tla
      3. 2536888Domain d5xgyc_: 5xgy C: [333977]
        automated match to d3ng4a_
        complexed with gol, tla
      4. 2536889Domain d5xgyd_: 5xgy D: [333953]
        automated match to d3ng4a_
        complexed with gol, tla
    35. Domains for 6a89:
      1. 3055025Domain d6a89d_: 6a89 D: [355088]
        automated match to d3ng4a_
        complexed with api, edo, gol, rib, tla
      2. 3055026Domain d6a89c_: 6a89 C: [355087]
        automated match to d3ng4a_
        complexed with api, edo, gol, rib, tla
      3. 3055031Domain d6a89a_: 6a89 A: [355093]
        automated match to d3ng4a_
        complexed with api, edo, gol, rib, tla
      4. 3055092Domain d6a89b_: 6a89 B: [355154]
        automated match to d3ng4a_
        complexed with api, edo, gol, rib, tla
    36. Domains for 6j3w:
      1. 3064156Domain d6j3wa_: 6j3w A: [364218]
        automated match to d3ng4a_
        complexed with 6na, act, edo, tla
      2. 3064161Domain d6j3wb_: 6j3w B: [364223]
        automated match to d3ng4a_
        complexed with 6na, act, edo, tla
      3. 3064162Domain d6j3wd_: 6j3w D: [364224]
        automated match to d3ng4a_
        complexed with 6na, act, edo, tla
      4. 3064264Domain d6j3wc_: 6j3w C: [364326]
        automated match to d3ng4a_
        complexed with 6na, act, edo, tla
    37. Domains for 6jte:
      1. 3068095Domain d6jtea_: 6jte A: [368157]
        automated match to d3ng4a_
        complexed with 6na, act, edo, gol, tla
      2. 3068109Domain d6jteb_: 6jte B: [368171]
        automated match to d3ng4a_
        complexed with 6na, act, edo, gol, tla
      3. 3068112Domain d6jtec_: 6jte C: [368174]
        automated match to d3ng4a_
        complexed with 6na, act, edo, gol, tla
      4. 3068124Domain d6jted_: 6jte D: [368186]
        automated match to d3ng4a_
        complexed with 6na, act, edo, gol, tla
    38. Domains for 6jve:
      1. 3068363Domain d6jveb_: 6jve B: [368425]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, peg, tla
      2. 3068364Domain d6jvec_: 6jve C: [368426]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, peg, tla
      3. 3068368Domain d6jvea_: 6jve A: [368430]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, peg, tla
      4. 3068369Domain d6jved_: 6jve D: [368431]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, peg, tla
    39. Domains for 6jx8:
      1. 3068800Domain d6jx8a_: 6jx8 A: [368862]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, tla
      2. 3068804Domain d6jx8b_: 6jx8 B: [368866]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, tla
      3. 3068805Domain d6jx8c_: 6jx8 C: [368867]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, tla
      4. 3068968Domain d6jx8d_: 6jx8 D: [369030]
        automated match to d3ng4a_
        complexed with 6na, act, cl, edo, gol, tla
    40. Domains for 7dy5:
      1. 3098846Domain d7dy5c_: 7dy5 C: [398908]
        automated match to d3ng4a_
        complexed with 6na, cl, edo, gol, tla
      2. 3098865Domain d7dy5b_: 7dy5 B: [398927]
        automated match to d3ng4a_
        complexed with 6na, cl, edo, gol, tla
      3. 3098869Domain d7dy5a_: 7dy5 A: [398931]
        automated match to d3ng4a_
        complexed with 6na, cl, edo, gol, tla
      4. 3098888Domain d7dy5d_: 7dy5 D: [398950]
        automated match to d3ng4a_
        complexed with 6na, cl, edo, gol, tla
  3. 2536914Fruit fly (Drosophila melanogaster) [TaxId:7227] [187529] (1 PDB entry)
  4. 2536918Human (Homo sapiens) [TaxId:9606] [187654] (1 PDB entry)

More info for Protein automated matches from d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like

Timeline for Protein automated matches from d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like: