Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 1013083Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1052697Fold d.278: Ligand-binding domain in the NO signalling and Golgi transport [111125] (1 superfamily)
    an N-terminal helical bundle and the C-terminal alpha-beta(2)-alpha-beta(2) subdomain enclose a ligand-binding cavity
  4. 1052698Superfamily d.278.1: Ligand-binding domain in the NO signalling and Golgi transport [111126] (3 families) (S)
  5. 1052732Family d.278.1.2: TRAPP components [118076] (3 proteins)
    Pfam PF04051; form homo- and hetero-dimers with the first two helices of one subunit complementing the fold of the other subunit to the H-NOX domain fold
  6. 1052742Protein automated matches [190535] (2 species)
    not a true protein

Species:

  1. 1052743Human (Homo sapiens) [TaxId:9606] [187502] (2 PDB entries)
    1. Domain for 1sz7:
    2. Domain for 2c0j:
  2. 1052746Mouse (Mus musculus) [TaxId:10090] [187891] (3 PDB entries)
    1. Domain for 2j3r:
    2. Domain for 2j3t:
    3. Domains for 2j3w:
      1. 1052747Domain d2j3wd_: 2j3w D: [161467]
        Other proteins in same PDB: d2j3wa_, d2j3wb1, d2j3wc_, d2j3wf1
        automated match to d1wc8a_
        complexed with plm
      2. 1052748Domain d2j3we_: 2j3w E: [161468]
        Other proteins in same PDB: d2j3wa_, d2j3wb1, d2j3wc_, d2j3wf1
        automated match to d1wc8a_
        complexed with plm

More info for Protein automated matches from d.278.1.2: TRAPP components

Timeline for Protein automated matches from d.278.1.2: TRAPP components: