Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133931Family c.68.1.22: Glycosylating toxin catalytic domain-like [159726] (4 protein domains)
    contains Glycosyltransferase sugar-binding region containing DXD motif, Pfam PF04488
  6. 2133942Protein automated matches [190532] (3 species)
    not a true protein

Species:

  1. 2133943Clostridium difficile [TaxId:1496] [187493] (1 PDB entry)
  2. 2133945Clostridium sordellii [TaxId:1505] [188384] (3 PDB entries)
    1. Domain for 2vkd:
    2. Domains for 2vkh:
      1. 2133949Domain d2vkha_: 2vkh A: [153225]
        automated match to d2bvla1
        complexed with ca, upg
      2. 2133950Domain d2vkhb_: 2vkh B: [153226]
        automated match to d2bvla1
        complexed with ca, upg
      3. 2133951Domain d2vkhc_: 2vkh C: [153227]
        automated match to d2bvla1
        complexed with ca, upg
    3. Domains for 2vl8:
      1. 2133946Domain d2vl8a_: 2vl8 A: [153266]
        automated match to d2bvla1
        complexed with ca, cts, udp
      2. 2133947Domain d2vl8b_: 2vl8 B: [153267]
        automated match to d2bvla1
        complexed with ca, cts, udp
      3. 2133948Domain d2vl8c_: 2vl8 C: [153268]
        automated match to d2bvla1
        complexed with ca, cts, udp
  3. 2291001Clostridioides difficile [TaxId:1496] [334302] (3 PDB entries)
    1. Domain for 5uqm:
    2. Domain for 5uqn:
    3. Domains for 5uqt:
      1. 2291002Domain d5uqtb1: 5uqt B:3-539 [334303]
        Other proteins in same PDB: d5uqta2, d5uqtb2
        automated match to d2bvla1
        complexed with agi, mn
      2. 2291050Domain d5uqta1: 5uqt A:3-539 [334351]
        Other proteins in same PDB: d5uqta2, d5uqtb2
        automated match to d2bvla1
        complexed with agi, mn

More info for Protein automated matches from c.68.1.22: Glycosylating toxin catalytic domain-like

Timeline for Protein automated matches from c.68.1.22: Glycosylating toxin catalytic domain-like: