Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.151: CsrA-like [117129] (1 superfamily)
    sandwich; 10 strands in 2 sheets; intertwined dimer (segment-swapped, 5-stranded greek-key sandwich?)
  4. Superfamily b.151.1: CsrA-like [117130] (2 families) (S)
  5. Family b.151.1.1: CsrA-like [117131] (2 proteins)
    Pfam PF02599
  6. Protein automated matches [190528] (4 species)
    not a true protein

Species:

  1. Escherichia coli [TaxId:574521] [348991] (1 PDB entry)
  2. Pseudomonas fluorescens [TaxId:294] [255284] (6 PDB entries)
    1. Domains for 2jpp:
      1. Domain d2jppa_: 2jpp A: [242260]
        automated match to d2btia_
        protein/RNA complex
      2. Domain d2jppb_: 2jpp B: [242261]
        automated match to d2btia_
        protein/RNA complex
    2. Domains for 2mfc:
      1. Domain d2mfca_: 2mfc A: [264392]
        automated match to d2mf0a_
        protein/RNA complex
      2. Domain d2mfcc_: 2mfc C: [264393]
        automated match to d2mf0a_
        protein/RNA complex
    3. Domains for 2mfe:
      1. Domain d2mfea_: 2mfe A: [264394]
        automated match to d2mf0a_
        protein/RNA complex
      2. Domain d2mfec_: 2mfe C: [264395]
        automated match to d2mf0a_
        protein/RNA complex
    4. Domains for 2mff:
      1. Domain d2mffa_: 2mff A: [264396]
        automated match to d2mf0a_
        protein/RNA complex
      2. Domain d2mffc_: 2mff C: [264397]
        automated match to d2mf0a_
        protein/RNA complex
    5. Domains for 2mfg:
      1. Domain d2mfga_: 2mfg A: [264398]
        automated match to d2mf0a_
        protein/RNA complex
      2. Domain d2mfgc_: 2mfg C: [264399]
        automated match to d2mf0a_
        protein/RNA complex
    6. Domains for 2mfh:
      1. Domain d2mfha_: 2mfh A: [264400]
        automated match to d2mf0a_
        protein/RNA complex
      2. Domain d2mfhc_: 2mfh C: [264401]
        automated match to d2mf0a_
        protein/RNA complex
  3. Pseudomonas protegens [TaxId:220664] [256427] (2 PDB entries)
    1. Domains for 2mf0:
      1. Domain d2mf0a_: 2mf0 A: [256428]
        automated match to d2btia_
        protein/RNA complex
      2. Domain d2mf0b_: 2mf0 B: [257938]
        automated match to d2btia_
        protein/RNA complex
      3. Domain d2mf0c_: 2mf0 C: [257937]
        automated match to d2btia_
        protein/RNA complex
      4. Domain d2mf0d_: 2mf0 D: [262214]
        automated match to d2mf0a_
        protein/RNA complex
      5. Domain d2mf0e_: 2mf0 E: [262215]
        automated match to d2mf0a_
        protein/RNA complex
      6. Domain d2mf0f_: 2mf0 F: [262216]
        automated match to d2mf0a_
        protein/RNA complex
    2. Domains for 2mf1:
      1. Domain d2mf1a_: 2mf1 A: [264386]
        automated match to d2mf0a_
        protein/RNA complex
      2. Domain d2mf1b_: 2mf1 B: [264387]
        automated match to d2mf0a_
        protein/RNA complex
      3. Domain d2mf1c_: 2mf1 C: [264388]
        automated match to d2mf0a_
        protein/RNA complex
      4. Domain d2mf1d_: 2mf1 D: [264389]
        automated match to d2mf0a_
        protein/RNA complex
      5. Domain d2mf1e_: 2mf1 E: [264390]
        automated match to d2mf0a_
        protein/RNA complex
      6. Domain d2mf1f_: 2mf1 F: [264391]
        automated match to d2mf0a_
        protein/RNA complex
  4. Yersinia enterocolitica [TaxId:630] [187488] (1 PDB entry)

More info for Protein automated matches from b.151.1.1: CsrA-like

Timeline for Protein automated matches from b.151.1.1: CsrA-like: