Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1199112Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 1199113Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 1199567Family d.22.1.0: automated matches [191400] (1 protein)
    not a true family
  6. 1199568Protein automated matches [190526] (11 species)
    not a true protein

Species:

  1. 1199569Anemonia majano [TaxId:105399] [188526] (3 PDB entries)
    1. Domain for 2a46:
    2. Domain for 2a47:
    3. Domain for 2a48:
  2. Anthomedusae sp. [TaxId:328397] [194158] (2 PDB entries)
    1. Domain for 3gl4:
    2. Domain for 4b30:
  3. 1199576Cerianthus membranaceus [TaxId:208460] [188528] (1 PDB entry)
  4. 1199585Clavularia sp. [TaxId:86521] [188532] (3 PDB entries)
    1. Domain for 2hqk:
    2. Domains for 2otb:
      1. 1199589Domain d2otba_: 2otb A: [166840]
        automated match to d1mova_
      2. 1199590Domain d2otbb_: 2otb B: [166841]
        automated match to d1mova_
    3. Domains for 2ote:
      1. 1199587Domain d2otea_: 2ote A: [166842]
        automated match to d1mova_
        complexed with act
      2. 1199588Domain d2oteb_: 2ote B: [166843]
        automated match to d1mova_
        complexed with act
  5. 1199591Echinophyllia sp. [TaxId:301887] [188534] (8 PDB entries)
    1. Domain for 2gx0:
    2. Domain for 2gx2:
    3. Domains for 2ie2:
      1. 1199596Domain d2ie2a_: 2ie2 A: [165522]
        automated match to d1mova_
      2. 1199597Domain d2ie2b_: 2ie2 B: [165523]
        automated match to d1mova_
      3. 1199598Domain d2ie2c_: 2ie2 C: [165524]
        automated match to d1mova_
      4. 1199599Domain d2ie2d_: 2ie2 D: [165525]
        automated match to d1mova_
      5. 1199600Domain d2ie2e_: 2ie2 E: [165526]
        automated match to d1mova_
      6. 1199601Domain d2ie2f_: 2ie2 F: [165527]
        automated match to d1mova_
    4. Domains for 2z1o:
      1. 1199592Domain d2z1oa_: 2z1o A: [170981]
        automated match to d1mova_
      2. 1199593Domain d2z1ob_: 2z1o B: [170982]
        automated match to d1mova_
      3. 1199594Domain d2z1oc_: 2z1o C: [170983]
        automated match to d1mova_
      4. 1199595Domain d2z1od_: 2z1o D: [170984]
        automated match to d1mova_
    5. Domains for 2z6y:
      1. 1199604Domain d2z6ya_: 2z6y A: [171090]
        automated match to d1mova_
      2. 1199605Domain d2z6yb_: 2z6y B: [171091]
        automated match to d1mova_
      3. 1199606Domain d2z6yc_: 2z6y C: [171092]
        automated match to d1mova_
      4. 1199607Domain d2z6yd_: 2z6y D: [171093]
        automated match to d1mova_
    6. Domains for 3zuf:
      1. 1199608Domain d3zufa_: 3zuf A: [186575]
        automated match to d1mova_
      2. 1199609Domain d3zufb_: 3zuf B: [186576]
        automated match to d1mova_
      3. 1199610Domain d3zufc_: 3zuf C: [186577]
        automated match to d1mova_
      4. 1199611Domain d3zufd_: 3zuf D: [186578]
        automated match to d1mova_
      5. 1199612Domain d3zufe_: 3zuf E: [186579]
        automated match to d1mova_
      6. 1199613Domain d3zuff_: 3zuf F: [186580]
        automated match to d1mova_
    7. Domains for 3zuj:
      1. 1199614Domain d3zuja_: 3zuj A: [186581]
        automated match to d1mova_
      2. 1199615Domain d3zujb_: 3zuj B: [186582]
        automated match to d1mova_
      3. 1199616Domain d3zujc_: 3zuj C: [186583]
        automated match to d1mova_
      4. 1199617Domain d3zujd_: 3zuj D: [186584]
        automated match to d1mova_
      5. 1199618Domain d3zuje_: 3zuj E: [186585]
        automated match to d1mova_
      6. 1199619Domain d3zujf_: 3zuj F: [186586]
        automated match to d1mova_
    8. Domains for 3zul:
      1. 1199620Domain d3zula_: 3zul A: [186587]
        automated match to d1mova_
      2. 1199621Domain d3zulb_: 3zul B: [186588]
        automated match to d1mova_
      3. 1199622Domain d3zulc_: 3zul C: [186589]
        automated match to d1mova_
      4. 1199623Domain d3zuld_: 3zul D: [186590]
        automated match to d1mova_
      5. 1199624Domain d3zule_: 3zul E: [186591]
        automated match to d1mova_
      6. 1199625Domain d3zulf_: 3zul F: [186592]
        automated match to d1mova_
  6. 1199626Favia favus [TaxId:102203] [188529] (3 PDB entries)
    1. Domains for 1xss:
      1. 1199631Domain d1xssa_: 1xss A: [162103]
        automated match to d1mova_
        complexed with mg, na
      2. 1199632Domain d1xssb_: 1xss B: [162104]
        automated match to d1mova_
        complexed with mg, na
    2. Domains for 2ddc:
      1. 1199629Domain d2ddca_: 2ddc A: [163611]
        automated match to d1mova_
        complexed with mg, na
      2. 1199630Domain d2ddcb_: 2ddc B: [163612]
        automated match to d1mova_
        complexed with mg, na
    3. Domains for 2ddd:
      1. 1199627Domain d2ddda_: 2ddd A: [163613]
        automated match to d1mova_
        complexed with mg, na
      2. 1199628Domain d2dddb_: 2ddd B: [163614]
        automated match to d1mova_
        complexed with mg, na
  7. 1199633Fungia concinna [TaxId:496660] [193728] (2 PDB entries)
    1. Domain for 2zmu:
    2. Domain for 2zo7:
  8. 1199636Lobophyllia hemprichii [TaxId:46758] [187486] (9 PDB entries)
    1. Domains for 1zux:
      1. 1199645Domain d1zuxa_: 1zux A: [162600]
        automated match to d1mova_
      2. 1199646Domain d1zuxb_: 1zux B: [162601]
        automated match to d1mova_
      3. 1199647Domain d1zuxc_: 1zux C: [162602]
        automated match to d1mova_
      4. 1199648Domain d1zuxd_: 1zux D: [162603]
        automated match to d1mova_
    2. Domains for 2btj:
      1. 1199657Domain d2btja_: 2btj A: [163163]
        automated match to d1mova_
        complexed with iey
      2. 1199658Domain d2btjb_: 2btj B: [163164]
        automated match to d1mova_
        complexed with iey
      3. 1199659Domain d2btjc_: 2btj C: [163165]
        automated match to d1mova_
        complexed with iey
      4. 1199660Domain d2btjd_: 2btj D: [163166]
        automated match to d1mova_
        complexed with iey
    3. Domains for 2vvh:
      1. 1199637Domain d2vvha_: 2vvh A: [168857]
        automated match to d1mova_
        complexed with so3, so4
      2. 1199638Domain d2vvhb_: 2vvh B: [168858]
        automated match to d1mova_
        complexed with so3, so4
      3. 1199639Domain d2vvhc_: 2vvh C: [168859]
        automated match to d1mova_
        complexed with so3, so4
      4. 1199640Domain d2vvhd_: 2vvh D: [168860]
        automated match to d1mova_
        complexed with so3, so4
    4. Domains for 2vvi:
      1. 1199653Domain d2vvia_: 2vvi A: [168861]
        automated match to d1mova_
        complexed with so3, so4
      2. 1199654Domain d2vvib_: 2vvi B: [168862]
        automated match to d1mova_
        complexed with so3, so4
      3. 1199655Domain d2vvic_: 2vvi C: [168863]
        automated match to d1mova_
        complexed with so3, so4
      4. 1199656Domain d2vvid_: 2vvi D: [168864]
        automated match to d1mova_
        complexed with so3, so4
    5. Domains for 2vvj:
      1. 1199649Domain d2vvja_: 2vvj A: [168865]
        automated match to d1mova_
        complexed with so3, so4
      2. 1199650Domain d2vvjb_: 2vvj B: [168866]
        automated match to d1mova_
        complexed with so3, so4
      3. 1199651Domain d2vvjc_: 2vvj C: [168867]
        automated match to d1mova_
        complexed with so3, so4
      4. 1199652Domain d2vvjd_: 2vvj D: [168868]
        automated match to d1mova_
        complexed with so3, so4
    6. Domains for 3p8u:
      1. 1199665Domain d3p8ua_: 3p8u A: [183591]
        automated match to d1mova_
        complexed with so3, so4
      2. 1199666Domain d3p8ub_: 3p8u B: [183592]
        automated match to d1mova_
        complexed with so3, so4
      3. 1199667Domain d3p8uc_: 3p8u C: [183593]
        automated match to d1mova_
        complexed with so3, so4
      4. 1199668Domain d3p8ud_: 3p8u D: [183594]
        automated match to d1mova_
        complexed with so3, so4
    7. Domains for 3s05:
      1. 1199661Domain d3s05a_: 3s05 A: [185235]
        automated match to d1mova_
      2. 1199662Domain d3s05b_: 3s05 B: [185236]
        automated match to d1mova_
      3. 1199663Domain d3s05c_: 3s05 C: [185237]
        automated match to d1mova_
      4. 1199664Domain d3s05d_: 3s05 D: [185238]
        automated match to d1mova_
    8. Domains for 3tmr:
      1. 1199641Domain d3tmra_: 3tmr A: [185883]
        automated match to d1mova_
        complexed with so3, so4
      2. 1199642Domain d3tmrb_: 3tmr B: [185884]
        automated match to d1mova_
        complexed with so3, so4
      3. 1199643Domain d3tmrc_: 3tmr C: [185885]
        automated match to d1mova_
        complexed with so3, so4
      4. 1199644Domain d3tmrd_: 3tmr D: [185886]
        automated match to d1mova_
        complexed with so3, so4
    9. Domains for 3tmt:
      1. 1199669Domain d3tmta_: 3tmt A: [185887]
        automated match to d1mova_
        complexed with so4
      2. 1199670Domain d3tmtb_: 3tmt B: [185888]
        automated match to d1mova_
        complexed with so4
      3. 1199671Domain d3tmtc_: 3tmt C: [185889]
        automated match to d1mova_
        complexed with so4
      4. 1199672Domain d3tmtd_: 3tmt D: [185890]
        automated match to d1mova_
        complexed with so4
  9. 1199673Trachyphyllia geoffroyi [TaxId:196280] [188530] (1 PDB entry)
  10. 1199676Verrillofungia concinna [TaxId:496660] [196369] (1 PDB entry)
  11. 1199678Zoanthus sp. [TaxId:105402] [193832] (6 PDB entries)
    1. Domain for 1xa9:
    2. Domain for 1xae:
    3. Domain for 2fl1:
    4. Domain for 2icr:
    5. Domain for 2ojk:
    6. Domain for 2pxw:

More info for Protein automated matches from d.22.1.0: automated matches

Timeline for Protein automated matches from d.22.1.0: automated matches: